Gchil2389.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2389.t1
Unique NameGchil2389.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length444
Homology
BLAST of Gchil2389.t1 vs. uniprot
Match: A0A2V3IC45_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC45_9FLOR)

HSP 1 Score: 151 bits (382), Expect = 2.780e-37
Identity = 121/409 (29.58%), Postives = 192/409 (46.94%), Query Frame = 0
Query:    3 TAPFSVKPTSVFNRIAVDDLANDFVHGILALVIVVELGNFCQTIIYATPTLQREALNRFITFHRVRTLRFLHEPITSRFK-SNRLLHQMSRNYNSFRNKDCFHLSVACFVALALIGIEFVVIFVTTPIFTPITAGATTFDAKLGVTENAPRTRDVK---PGCDDFFVPARGIHKASAVLKCVSTSSSETSGIELKDSISMTNSINDNIHSFSIRSKTSSNMTTAKLVISIRSIGQGELEMAPFRADIDRDATIAVFKAIAEGTLN---RPLPSFESNL---------ISYSVEVGAETVIYEEESLGEPYDRLTSALISRLRSMDVVLNTTSAPWVFVESRTYEERPNIVVSIMVSNRVPQGVVAIIAVLLVFLRILANARFSSFDDVSYVIMKDIIRDDCALGPLAGN 395
            T PFS    S+FN    +DLANDF  GIL+L++V +L    + +IY  P +     + ++ F R+ + R+L    T R     R  H+    +        F L+     ALAL+ I  +V  +              FD K+ V   A R R V      CDDFFV  RG+ ++  VLKCVS    + +  +    +S+     D I  F I S+  S   T  L   + S G       PFR D+  +  +   K +  G LN   R L   E +          +  + EV  E + Y      +  + + +A ++ LR MD+VLN+T  PWVF    T+E+  N  ++++   R+  G + I  VL++ ++ + N R + FD+V+++ MK+++ +DC LGPLA +
Sbjct:   66 TPPFSASSLSLFNSFTTNDLANDFTGGILSLIVVAQLHRIFKGLIYFFPGVHNRGYSSYVVFSRLASFRYLFRLFTRREPFGERSQHREEEEFGYSLKTILFPLT-----ALALLYIAELVTIIAGTTMRSQHFAEQNFDPKISVVRGAQRPRRVDNLWSDCDDFFVSTRGLFESGKVLKCVSEVRDQLTPYKANIKLSVRYYSGDTI--FDIHSRNGS-YKTIDLSTFLLSKGGVRFRTMPFRPDLSSEPEL---KHLLNGILNGVRRRLGYSELDTRHTLWAGKELEGASEVAEEIIFYHFHDWNDSAETIAAAFMAELRYMDLVLNSTGLPWVFTRPYTFEQM-NPAIAVVKQYRIAHGWLLIALVLVILIQFVVNTRVTHFDEVAFLAMKELMGEDCVLGPLAAD 462          
BLAST of Gchil2389.t1 vs. uniprot
Match: A0A2V3IN15_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN15_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 3.490e-37
Identity = 104/270 (38.52%), Postives = 155/270 (57.41%), Query Frame = 0
Query:    1 METAPFSVKPTSVFNRIAVDDLANDFVHGILALVIVVELGNFCQTIIYATPTLQREALNRFITFHRVRTLRFLHEPITSR-----FKSNRLLHQMSRNYNSFRNKDCFHLSVACFVALALIGIEFVVIFVTTPIFTPITAGATTFDAKLGVTENAPRTRDVKPGCDDFFVPARGIHKASAVLKCVSTSS-SETSGIELKDS-ISMTNSINDNIHSFSIRSKTSSNM-TTAKLVISIRSIGQGELEMAPFRADIDRDATIAVFKAIAEGTL 262
            M  APFSV+P S FNR + D++ N ++ G + LVI+VEL N  + ++Y T  L + A+NR+  F R+  +R L   +T R     + ++R  + + +N    RN   + L V    A+ L+  EF  I+  T   +PITA  T FD  L ++  A RT     GCDDFFVP+RG+ +A+ VLKC++ SS      I  +++ IS+ ++IN N H+  ++  T  +M T  ++ I IRSIGQG  +M  FR DID + T+ VF  I  GTL
Sbjct:    1 MSRAPFSVEPVSTFNRFSTDEMINAYIGGAIVLVILVELSNIFRAVLYGTRALDKRAINRYSIFERLADMRHLSTLLTGRESPAHYHTDRAPNIIQQNAPISRN--FWVLCVPTLAAVLLLSAEFASIYAGTTTPSPITAN-TNFDPLLALSTTARRTSQGN-GCDDFFVPSRGVRQAAKVLKCITNSSVPRNPRITWEEARISLKSTINSNTHTMLVQ--TGEDMHTIVRISIEIRSIGQGTQQMGVFRWDIDYNHTLEVFNGIINGTL 264          
BLAST of Gchil2389.t1 vs. uniprot
Match: A0A2V3ISJ2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISJ2_9FLOR)

HSP 1 Score: 132 bits (333), Expect = 1.050e-29
Identity = 112/414 (27.05%), Postives = 192/414 (46.38%), Query Frame = 0
Query:    6 FSVKPTSVFNRIAVDDLANDFVHGILALVIVVELGNFCQTIIYATPTLQREALNRFITFHRVRTLRFLHEPITSRFKS------NRLLHQMSRNYNSFRNKDCFHLSVACFVALALIGIEFVVIFVTTPIFTPITAGATTFDAKLGVTENA------PRTRD-VKPGCDDFFVPARGIHKASAVLKCVSTSSSETSGIELKDSISMTNSINDNIHSFSIRSKTSSNMTTAKLVISIRSIGQGELEMAPFRADIDRDA-TIAVFKAIAEGTLNR---PLPSFESNLISYSVEVGAETVI-----YEEESLGEPYDRLTSALISRLRSMDVVLNTTSAPWVFVESRTYEERPNIVVSIMVSNRVPQGVVAIIAVLLVFLRILANARFSSFDDVSYVIMKDIIRDDCALGPLAGNNR 397
            F+V   S FN    DDL N+F+ GI +L+I+V + +  + ++YA P +++   N +I F R+  +R+L   +++R +       NR    + RNY +        L +     + L   E   I   + + +  T+    FD ++ +          PR  D V P CDDFFVP RG+ +   VLKCV  +S+       + +I +         +F +           +L   +R I   +    PFR D+  +  T  V   I  G   R        +S++ S+    GA   I     Y +  + +  +   +AL + LRS D+VLN++ APW F  +  + ++ ++V++    + V  G + I  V++    I  N+  + FD+V+Y+ MK++I +DC LGPL  N R
Sbjct:  300 FTVPSVSRFNSFTTDDLTNNFISGIASLLILVHITHLIRGLMYAFPGIRKSRYNTYIIFSRLSRMRYLFRLLSAREEGVLSQIRNRPRKPVERNYRA--------LFIPILAVIVLYTGEIGAIIAGSEVRSKFTS-ENNFDPRISLETTRSTSTLRPRLEDDVNPNCDDFFVPQRGLQRRGKVLKCVEENSNPMCE-PYEHTIQLNVRFGSGRMAFQVHG-AGEECAELELSTVVRGIHGIDGRTMPFRPDLMGEVETRDVLNRIMNGVRRRLEYDEIDVKSDVWSFRESNGANDQIVDIEMYHKHEIRKTVNETKTALKAELRSADLVLNSSGAPWTFYAAYDFRQQADMVMATSKRSYVSHGALVIAVVVIYVAHIFLNSLLTYFDEVAYIAMKELIGEDCVLGPLTSNGR 702          
BLAST of Gchil2389.t1 vs. uniprot
Match: A0A2V3IC97_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC97_9FLOR)

HSP 1 Score: 113 bits (282), Expect = 9.560e-25
Identity = 83/271 (30.63%), Postives = 133/271 (49.08%), Query Frame = 0
Query:  140 FDAKLGVTENAPRTRDVK---PGCDDFFVPARGIHKASAVLKCVSTSSSETSGIELKDSISMTNSINDNIHSFSIRSKTSSNMTTAKLVISIRSIGQGELEMAPFRADIDRDATIAVFKAIAEGTLN---RPLPSFESNL---------ISYSVEVGAETVIYEEESLGEPYDRLTSALISRLRSMDVVLNTTSAPWVFVESRTYEERPNIVVSIMVSNRVPQGVVAIIAVLLVFLRILANARFSSFDDVSYVIMKDIIRDDCALGPLAGN 395
            FD K+ V   A R R V      CDDFFV  RG+ ++  VLKCVS    + +  +    +S+     D I  F I S+  S   T  L   + S G       PFR D+  +  +   K +  G LN   R L   E +          +  + EV  E + Y      +  + + +A ++ LR MD+VLN+T  PWVF    T+E+  N  ++++   R+  G + I  VL++ ++ + N R + FD+V+++ MK+++ +DC LGPLA +
Sbjct:   11 FDPKISVVRGAQRPRRVDNLWSDCDDFFVSTRGLFESGKVLKCVSEVRDQLTPYKANIKLSVRYYSGDTI--FDIHSRNGS-YKTIDLSTFLLSKGGVRFRTMPFRPDLSSEPEL---KHLLNGILNGVRRRLGYSELDTRHTLWAGKELEGASEVAEEIIFYHFHDWNDSAETIATAFMAELRYMDLVLNSTGLPWVFTRPYTFEQM-NPAIAVVKQYRIAHGWLLIALVLVILIQFVVNTRVTHFDEVAFLAMKELMGEDCVLGPLAAD 274          
The following BLAST results are available for this feature:
BLAST of Gchil2389.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IC45_9FLOR2.780e-3729.58Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IN15_9FLOR3.490e-3738.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISJ2_9FLOR1.050e-2927.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IC97_9FLOR9.560e-2530.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..443
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..443
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..344
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..101
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 365..443
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 345..364
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 26..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:311978..313309 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2389.t1Gchil2389.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 311978..313309 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2389.t1 ID=Gchil2389.t1|Name=Gchil2389.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=444bp
METAPFSVKPTSVFNRIAVDDLANDFVHGILALVIVVELGNFCQTIIYAT
PTLQREALNRFITFHRVRTLRFLHEPITSRFKSNRLLHQMSRNYNSFRNK
DCFHLSVACFVALALIGIEFVVIFVTTPIFTPITAGATTFDAKLGVTENA
PRTRDVKPGCDDFFVPARGIHKASAVLKCVSTSSSETSGIELKDSISMTN
SINDNIHSFSIRSKTSSNMTTAKLVISIRSIGQGELEMAPFRADIDRDAT
IAVFKAIAEGTLNRPLPSFESNLISYSVEVGAETVIYEEESLGEPYDRLT
SALISRLRSMDVVLNTTSAPWVFVESRTYEERPNIVVSIMVSNRVPQGVV
AIIAVLLVFLRILANARFSSFDDVSYVIMKDIIRDDCALGPLAGNNRTVP
ESIHLRSSICHRSMLCEAVKNTDQRMDSPIENETNLPTTSISN*
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