Gchil2384.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2384.t1
Unique NameGchil2384.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length233
Homology
BLAST of Gchil2384.t1 vs. uniprot
Match: A0A2V3ILA7_9FLOR (Vesicle transport v-SNARE 13 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILA7_9FLOR)

HSP 1 Score: 280 bits (717), Expect = 1.080e-92
Identity = 147/228 (64.47%), Postives = 186/228 (81.58%), Query Frame = 0
Query:    1 MSFAQPSLPPLESSFSDYHREFYASLTTANNAVQSAADQQPKQAAQTLLDADTALSEAADLLKTLELEAQSQQLQLRNKLRPYVTQGRNALSDAGKALRATRIAVSQRQEVADRTNLFDRAPDDVRIQMTSNTSLVERSNELITDSRRHIAETELIGASILEDLQSQRSTITRARNNLGNMSNGLQQSDSILNTMHRRAMANRIMVYVILAIIGIACVAIMYVRIFHS 228
            MSF Q +LPPL+S+FSDYHREFYA+L  +  A+Q++A+Q   Q +Q L DAD  ++EAADL KTLE+E+QSQ L  RNKLRPYVT+GR ALSDA KALRA R+A SQR+++ +R  L  R   DVRI M+  T+ +E+SNE+ITDSRRHIAETEL+GASILEDL SQR+TI+RAR N+GNMS GL QSD+ILNTM RRA+ NRI+VY++L  IGI+C+A++YVR+FHS
Sbjct:    1 MSFKQTALPPLDSTFSDYHREFYAALNKSQQAIQASANQDLNQVSQCLNDADQHITEAADLFKTLEMESQSQDLTTRNKLRPYVTEGRTALSDARKALRAARVATSQRRDLVNRDELLQRG-GDVRIDMSDTTAQIEKSNEVITDSRRHIAETELVGASILEDLLSQRNTISRARQNVGNMSTGLDQSDTILNTMQRRALVNRILVYIVLVAIGISCLAVIYVRMFHS 227          
BLAST of Gchil2384.t1 vs. uniprot
Match: R7QM93_CHOCR (Putative Vesicle transport v-SNARE n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM93_CHOCR)

HSP 1 Score: 193 bits (490), Expect = 3.600e-58
Identity = 114/240 (47.50%), Postives = 165/240 (68.75%), Query Frame = 0
Query:    1 MSFAQPS-----LPPLESSFSDYHREFYASLTTANNAVQSA---ADQQPKQAAQTLLDADTALSEAADLLKTLELEAQSQQLQLRNKLRPYVTQGRNALSDAGKALRATRIAVSQRQEVADRTNL---FDRAPDDVRIQMTSNTSLVERSNELITDSRRHIAETELIGASILEDLQSQRSTITRARNNLGNMSNGLQQSDSILNTMHRRAMANRIMVYVILAIIGIACVAIMYVRIFHSR 229
            MSFA+P      L P  S FSDYH+EF + L ++  ++ +A   ++  P  +   L +AD  + EA+DLLK++ELEAQ+     R  LR +V + R+ +S   + LRA RIA++QR+E  +R  L   +  +  + R +MT  T  +E+ +E+IT SRR+IAETE IGASILEDLQ+QR+TI RAR NLG +  GL+QS SI++TM RRA+ N+I+VY+ILAII +ACVAI++VR+FH++
Sbjct:    1 MSFAKPEATIIDLGPASSVFSDYHKEFTSLLASSAESISTAKSVSESSPADSNSALNEADRDIGEASDLLKSMELEAQAAPSDSRISLRSHVAKARDEVSRMRQELRAARIALAQRKEELNRDELLGGYSHSDAEDRSRMTDTTERLEKGSEIITGSRRNIAETEAIGASILEDLQNQRNTIMRARQNLGGVDGGLEQSGSIISTMQRRAIMNKIIVYIILAIIAVACVAIVFVRVFHAK 240          
BLAST of Gchil2384.t1 vs. uniprot
Match: C1E4H4_MICCC (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E4H4_MICCC)

HSP 1 Score: 85.9 bits (211), Expect = 9.690e-17
Identity = 73/223 (32.74%), Postives = 119/223 (53.36%), Query Frame = 0
Query:   21 EFYASLTTANNAVQS-AADQQPKQAAQTLLDADTALSEAADLLKTLELEAQSQQLQ-----LRNKLRPYVTQGRNALSDAGKALRATRIAVSQRQEVADRTNLFDRAP-DDV--------RIQMTSNTSLVERSNELITDSRRHIAETELIGASILEDLQSQRSTITRARNNLGNMSNGLQQSDSILNTMHRRAMANRIMVYVILAIIGIACVAIMYVRIFHS 228
            EF AS+    +++ S A D + ++  +T  D    ++EA  L++ ++LEA+SQQ       + NKLR Y        S+  +  R +++A     E  +R+ L   A  DDV        R +M   T  ++R+ + I D +R + ETE +G SIL+DL  QR TI  AR ++    + + +S  IL  M RRAMAN+ M+Y I+A++  A + + Y ++F S
Sbjct:   14 EFTASIARNTSSLPSLAGDAKVQKIGETESD----VAEAEALIRRMDLEARSQQNPAAKNPMLNKLRDYK-------SELARLKRESQLASRAANEANNRSQLLAGAELDDVSAPTSSSQRDRMAQATQQLDRTGDRIRDGKRTLLETEDLGVSILQDLHRQRETIVSAREHIHGADDNIGRSRKILQAMGRRAMANKAMLYGIIAMLFGAILLVAYFKLFRS 225          
BLAST of Gchil2384.t1 vs. uniprot
Match: C1MQ00_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MQ00_MICPC)

HSP 1 Score: 80.9 bits (198), Expect = 7.340e-15
Identity = 63/221 (28.51%), Postives = 113/221 (51.13%), Query Frame = 0
Query:   15 FSDYHREFYASLTTANNAVQSAADQQPKQAAQTLLDADTALSEAADLLKTLELEAQSQQ-----LQLRNKLRPYVTQGRNALSDAGKALRA--TRIAVSQRQEVADRTNLFDRAPDDVRIQMTSNTSLVERSNELITDSRRHIAETELIGASILEDLQSQRSTITRARNNLGNMSNGLQQSDSILNTMHRRAMANRIMVYVILAIIGIACVAIMYVRIFHS 228
            F  Y REF     + N A  S         +Q + + D  ++EA  L++ ++LEA+S +       +  KLR Y ++ +    ++  A RA  +  A SQ    A+  ++        R +M  +T+ ++ + + I + ++ + ETE +G SIL+DL  QR TI+ AR N+    + + +S  IL  M RRA AN++++Y I+A++  A   + Y ++  S
Sbjct:    5 FDGYEREFLEYTASINRATASLPSLDGAAKSQKIAEVDAEVAEAEALVRRMDLEARSLRDPTVKTPMLAKLRDYKSELQRLKRESQVAARAISSSNARSQLLAGAELDDMGAPTSSSQRERMLQSTARLDSTGDRIREGKKSLLETEELGVSILQDLHRQRETISSARENVHGADDNIARSRKILAAMGRRAAANKLLLYGIIAMLFFAICFVAYFKLIKS 225          
BLAST of Gchil2384.t1 vs. uniprot
Match: R1CZN5_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZN5_EMIHU)

HSP 1 Score: 79.7 bits (195), Expect = 1.870e-14
Identity = 63/221 (28.51%), Postives = 108/221 (48.87%), Query Frame = 0
Query:   13 SSFSDYHREFYASLTTANNAVQSAADQQPKQAAQTLL-DADTALSEAADLLKTLELEAQSQQLQLRNKLRPYVTQGRNALSDAGKALRATRIAVSQRQEVADRTNLFDRAPDDVRIQMTSNTSLVERSNELITDSRRHIAETELIGASILEDLQSQRSTITRARNNLGNMSNGLQQSDSILNTMHRRAMANRIMVYVILAIIGIACVAIMYVRIFHSRKRD 232
            S F+ Y  EF  +   AN+ + +     P       + +A  A+  AAD++  LE+EA         + +  +++ R+ LS A    RA  +A  Q    AD     +      R+  T  TS ++R  + +  + +   ETE +G SIL DL  QR T+ + R  L   + GL++S  +L +M +RA AN++++  I+A + +  VAI+Y++ F     D
Sbjct:    2 SEFASYESEFTHACMDANSKISTLERLAPGSGRDAAVKEAQAAVDSAADVVSRLEMEAGPSDRGRVRECKSSLSELRSKLSVARSNNRAAELAREQLLASADAPARMEAEAQHARLLET--TSRMQRGTDKLRAACQVAVETEAVGVSILGDLDQQRMTLEQTRERLRTANRGLERSKKLLQSMTKRAAANKMLMIGIIAFLCLMIVAILYLKFFMPSGSD 220          
BLAST of Gchil2384.t1 vs. uniprot
Match: A0A7S3RC76_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RC76_9SPIT)

HSP 1 Score: 79.3 bits (194), Expect = 2.380e-14
Identity = 64/212 (30.19%), Postives = 109/212 (51.42%), Query Frame = 0
Query:   15 FSDYHREFYASLTTANNAVQSAADQQPKQAAQTLL-DADTALSEAADLLKTLELEAQSQQLQLRNKLRPYVTQGRNALSDAGKALRATRIAVSQRQEVADRTNLFDRAP-DDVRIQMTSNTSLVERSNELITDSRRHIAETELIGASILEDLQSQRSTITRARNNLGNMSNGLQQSDSILNTMHRRAMANRIMVYVILAIIGIACVAIMYVR 224
            F+ Y  EF  +   AN  V +     P     T+   A++A+  AAD++  LE+EA   +     + +  + Q R+ LS A  +    R+A  QR+E+  R+    R   +    ++   TS ++R  E +  + +   ETE +GASIL DL  QR T+ + R  L N + GL +S  +L TM +RA AN+ ++  I+  + +  +AI+Y++
Sbjct:    2 FASYESEFTRACIEANAQVDTLEQLLPGSERDTVRRQAESAVEAAADVVAQLEMEAGPAEKPRVRECKASLAQLRSKLSAARSS---NRVAELQREELLRRSEEPQRMEAEQQHARLLETTSRLQRGTEKLRHACQVAIETEAVGASILTDLDQQRMTLEQTRERLRNANRGLAKSKKLLQTMTKRAWANKALMVGIIFFLMLMILAIIYLK 210          
BLAST of Gchil2384.t1 vs. uniprot
Match: A0A8J5MR24_HOMAM (Vesicle transport through interaction with t-SNAREs 1A-like n=1 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5MR24_HOMAM)

HSP 1 Score: 78.6 bits (192), Expect = 4.220e-14
Identity = 54/177 (30.51%), Postives = 89/177 (50.28%), Query Frame = 0
Query:   50 DADTALSEAADLLKTLELEAQS----QQLQLRNKLRPYVTQGRNALSDAGKALRATRIAVSQRQEVADRTNLFDRAPDDVRIQMTSNTSLVERSNELITDSRRHIAETELIGASILEDLQSQRSTITRARNNLGNMSNGLQQSDSILNTMHRRAMANRIMVYVILAIIGIACVAIMY 222
            D +  + EA +LL+ ++LE +     Q+ +L  +L+ Y  + +    +  +   +     S R E+ +         ++ +  +  NT  +ER++  IT   +   ETE IGA IL DL SQR TI+ AR  L      L QS  +LNTM RR + NR ++Y +L I+ I  +  +Y
Sbjct:   40 DVEKLVEEAKELLERMDLEVRDMEPVQREKLGGRLKSYQVELKRLEGEYSRIKSSMSNEASMRSELLEDCQAGMSVGEEQQQSLLDNTESLERTSTRITQGSKIAVETEHIGAQILNDLYSQRQTISHARERLRETDADLDQSSRVLNTMLRRVLQNRFILYTVLGIVAIVIIFAIY 216          
BLAST of Gchil2384.t1 vs. uniprot
Match: A0A2I4GB68_JUGRE (vesicle transport v-SNARE 13-like n=2 Tax=Juglans TaxID=16718 RepID=A0A2I4GB68_JUGRE)

HSP 1 Score: 76.6 bits (187), Expect = 2.140e-13
Identity = 60/217 (27.65%), Postives = 114/217 (52.53%), Query Frame = 0
Query:   15 FSDYHREFYASLTTANNAVQSAADQQPKQAAQTLLDADTALSEAADLLKTLELEAQSQQLQLRN----KLRPYVTQGRNALSDAGKALRATRIAVSQRQEVADRTNLFDR--APDDVRIQMTSNTSLVERSNELITDSRRHIAETELIGASILEDLQSQRSTITRARNNLGNMSNGLQQSDSILNTMHRRAMANRIMVYVILAIIGIACVAIMYVRI 225
            F  Y R++    +  +    +++    +Q  Q   +  + + EA  L++ ++LEA+S Q  ++     KLR Y +   N  S+  K + +  +  + R E+ + + + D   A  D R ++  +T  + +S   I +SRR + ETE +G SIL+DL SQR ++  A N L  + + + +S  IL  M RR   N+ ++ +I+A++ IA + I+Y ++
Sbjct:    5 FEGYERQYCELSSNLSRKCTASSALHGEQKKQKFAEIKSGIDEAESLIRKMDLEARSLQPNIKAVLLAKLREYKSDLNNLKSEV-KRIVSGNLNPAARDELLE-SGMADALTASADQRTRLMMSTERLGKSGGRIKESRRTMLETEELGVSILQDLHSQRQSLLHANNTLRGVDDNIGKSKRILTAMSRRMAKNKWIIGIIIAVLVIAIILILYFKL 219          
BLAST of Gchil2384.t1 vs. uniprot
Match: UPI001E67393B (vesicle transport through interaction with t-SNAREs homolog 1A-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E67393B)

HSP 1 Score: 76.6 bits (187), Expect = 2.180e-13
Identity = 54/219 (24.66%), Postives = 104/219 (47.49%), Query Frame = 0
Query:   11 LESSFSDYHREFYASLTTANNAVQSAADQQPKQAAQTLLDADTALSEAADLLKTLELEAQS----QQLQLRNKLRPYVTQGRNALSDAGKALRATRIAVSQRQEVADRTNLFDRAPDDVRIQMTSNTSLVERSNELITDSRRHIAETELIGASILEDLQSQRSTITRARNNLGNMSNGLQQSDSILNTMHRRAMANRIMVYVILAIIGIACVAIMYVRI 225
            + S   ++ ++F A      + +   + ++  +    + D +    EA +LL+ +ELE +     Q+ +L  +++ Y  + +    +  +    T    S R E+ +         ++ R  +  N+  +ER+   ++   +   ETE IGA IL DL SQR TI+ AR  L      L QS  +LNTM R+ + NR ++Y +  ++G+  V  +Y+ +
Sbjct:    1 MASLLPEFEQQFAAVTADITSKICHISSRESSERISLIQDVENLTEEARELLERMELEVRDLEPVQREKLAGRIKSYQVELKRLEGEYSRVRAITTSEGSTRAELLEDGYAGVSVGEEQRQALLDNSETLERATVRLSQGHKIALETEHIGAQILNDLYSQRQTISHARERLRETDVDLDQSSRVLNTMLRQVLQNRFILYAVFIVVGVVIVFAIYLAV 219          
BLAST of Gchil2384.t1 vs. uniprot
Match: A0A6A2WW54_HIBSY (Vesicle transport v-SNARE 11 n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WW54_HIBSY)

HSP 1 Score: 75.5 bits (184), Expect = 5.720e-13
Identity = 59/217 (27.19%), Postives = 111/217 (51.15%), Query Frame = 0
Query:   15 FSDYHREFYASLTTANNAVQSAADQQPKQAAQTLLDADTALSEAADLLKTLELEAQSQQLQLRN----KLRPYVTQGRNALSDAGKALRATRIAVSQRQEVADRTNLFDR--APDDVRIQMTSNTSLVERSNELITDSRRHIAETELIGASILEDLQSQRSTITRARNNLGNMSNGLQQSDSILNTMHRRAMANRIMVYVILAIIGIACVAIMYVRI 225
            F  Y R++       +    +AA    +Q  Q + D    L  A +L++ ++LEA+S Q  ++     KLR Y +   N  S+  K + +  +    R ++ + + + D   A  + R ++   T  + +S++ + DSRR + ETE +G SIL+DL SQR  +  A N L  + + + +S  IL  M RR   N+ ++ +I+ ++ +A V ++Y ++
Sbjct:    5 FEGYERQYCELSANLSKKCTAAAAISGEQKKQKVSDIRGGLENAEELIRKMDLEARSLQSNVKAMLLAKLREYKSDLNNLKSEV-KRIASGNLNPDDRDQLLE-SGMADALTASTNQRSRLMMTTERLNQSSDRVKDSRRTMLETEELGVSILQDLHSQRQALLHANNTLHGVDDNIGKSKKILTAMSRRMNRNKWIIGIIVTVLIVAVVIVLYFKL 219          
The following BLAST results are available for this feature:
BLAST of Gchil2384.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILA7_9FLOR1.080e-9264.47Vesicle transport v-SNARE 13 n=1 Tax=Gracilariopsi... [more]
R7QM93_CHOCR3.600e-5847.50Putative Vesicle transport v-SNARE n=1 Tax=Chondru... [more]
C1E4H4_MICCC9.690e-1732.74t-SNARE coiled-coil homology domain-containing pro... [more]
C1MQ00_MICPC7.340e-1528.51Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
R1CZN5_EMIHU1.870e-1428.51Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S3RC76_9SPIT2.380e-1430.19Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A8J5MR24_HOMAM4.220e-1430.51Vesicle transport through interaction with t-SNARE... [more]
A0A2I4GB68_JUGRE2.140e-1327.65vesicle transport v-SNARE 13-like n=2 Tax=Juglans ... [more]
UPI001E67393B2.180e-1324.66vesicle transport through interaction with t-SNARE... [more]
A0A6A2WW54_HIBSY5.720e-1327.19Vesicle transport v-SNARE 11 n=2 Tax=Hibiscus syri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
NoneNo IPR availableGENE3D1.20.5.110coord: 124..203
e-value: 7.9E-18
score: 66.4
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 136..198
e-value: 1.5E-15
score: 57.2
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 14..224
NoneNo IPR availablePANTHERPTHR21230:SF26VESICLE TRANSPORT V-SNARE 13coord: 14..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 224..232
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..223
NoneNo IPR availableCDDcd15862SNARE_Vti1coord: 137..194
e-value: 2.44538E-13
score: 61.0056
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 137..195
NoneNo IPR availableTMHMMTMhelixcoord: 204..226
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 128..195
e-value: 3.5E-4
score: 29.9
IPR038407Vesicle transport v-SNARE, N-terminal domain superfamilyGENE3D1.20.58.400coord: 12..110
e-value: 6.9E-11
score: 44.2
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 17..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:303485..304183 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2384.t1Gchil2384.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 303485..304183 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2384.t1 ID=Gchil2384.t1|Name=Gchil2384.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=233bp
MSFAQPSLPPLESSFSDYHREFYASLTTANNAVQSAADQQPKQAAQTLLD
ADTALSEAADLLKTLELEAQSQQLQLRNKLRPYVTQGRNALSDAGKALRA
TRIAVSQRQEVADRTNLFDRAPDDVRIQMTSNTSLVERSNELITDSRRHI
AETELIGASILEDLQSQRSTITRARNNLGNMSNGLQQSDSILNTMHRRAM
ANRIMVYVILAIIGIACVAIMYVRIFHSRKRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR038407v-SNARE_N_sf
IPR010989SNARE