Gchil2372.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2372.t1
Unique NameGchil2372.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length829
Homology
BLAST of Gchil2372.t1 vs. uniprot
Match: A0A2V3IV61_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV61_9FLOR)

HSP 1 Score: 252 bits (643), Expect = 6.790e-74
Identity = 129/248 (52.02%), Postives = 171/248 (68.95%), Query Frame = 0
Query:  582 PPGRVIAKIQPTEILPLPPDAFEDDEIQITSVTNNKTREGTKVSTAASESRADQECIPIGERQGIRPNRDYPHFRFTCDTFPFKKVRARTKELFCDFCYCYICDVLASDCTKWSVHCKVLDN-QKSKRERDVVLTERKRRQLSNDEARCTLLKRITRPQPVHDFEYEHLVELPNDEEEFEDDGCPHSASEDEQPSMPIDFDHGHLMHSIQRVRIAGKGSKLERMVDTNPHTETYVTFRQGVSAYADLL 828
            PP ++  ++QP   LP P    +DDE++IT VT+++TR+ T  +   + SR D EC+  GER+GI   RDYPHFRF C   PFKK+RAR KE  C+ C+CYICDVLA+DCTKWS HCK +D   K ++ER++ L ER+RR+ S D AR T++KRI +PQPV + EYE LVELPN++EEFEDDG PHS S+D+  S P+DFDH  L   +Q +     GS L+R ++ NP    Y T  +G SA+ADLL
Sbjct:   39 PPKQISPQLQP---LPSPVGFSDDDELEITLVTSSQTRKDTTATPPVTSSRTDLECV--GERRGILALRDYPHFRFQCGIHPFKKMRARMKETCCERCFCYICDVLATDCTKWSAHCKAVDTVTKYRKERELRLEERRRREQSTDGARHTIVKRIIKPQPVDEREYEQLVELPNEDEEFEDDGFPHSCSDDDAASAPVDFDHPKLNPMLQHLHRDNNGSFLQRKLEKNPERPAYSTIFRGPSAFADLL 281          
BLAST of Gchil2372.t1 vs. uniprot
Match: A0A2V3IVA2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVA2_9FLOR)

HSP 1 Score: 169 bits (429), Expect = 3.240e-42
Identity = 103/265 (38.87%), Postives = 144/265 (54.34%), Query Frame = 0
Query:    3 QVIDLTTSESEAPRVPRVRRSRPRPVPNDPDLCIVSESIRPLDSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPKSPASSKKRKRCA-RDDSPPQVVTLKKGIQPLEDYAHPRYACSRLPFTAQSAPTHCPKCFCFVCDVPAAQCQQWPDHCRAMDKPEWRRKRRNVRNAAGLYDRGIDQLAKEARRLEESARADSERRSVLEALG-EHRNLADIIAEQEHIASQYNRSAAPNGPLH 265
            +VIDLT+S++E  R+PRVRR  P P+P+DP+L +VSE ++    P                                                      A P++P++    KR   +    PQVV LKKGI+PLEDY H R+AC++ P++AQ+A  +CPKCFCFVCDV A+ CQ+W  HC A+D  EW+ +RR  R A+  Y+RG+D LAKEARR E+ +R + ERR VLEALG E      ++AEQ    S++ +    +   H
Sbjct:    2 EVIDLTSSDTEPLRLPRVRR--PCPIPDDPELVLVSEKLKHAPKPREP---------------------------------------------------APPRNPSTPTPSKRPRLKTTEAPQVVGLKKGIKPLEDYPHARFACTQQPYSAQNARKYCPKCFCFVCDVLASTCQEWERHCNAVDNEEWKMERREKRKASRRYERGVDLLAKEARRREKRSRKEKERREVLEALGGEILTFEQLMAEQMEAVSEFYKGMVADPEQH 213          
BLAST of Gchil2372.t1 vs. uniprot
Match: R7QIC1_CHOCR (SET domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIC1_CHOCR)

HSP 1 Score: 98.6 bits (244), Expect = 2.370e-17
Identity = 71/186 (38.17%), Postives = 92/186 (49.46%), Query Frame = 0
Query:  574 DDVSKPVYPPGRVIAKIQPTEILPLPPDAFE--DDEIQITSVTNNKTREGTKVSTA--------------ASESRADQECIPIGERQGIRPNRDYPHFRFTCDTFPFKKVRARTKELFCDFCYCYICDVLASDCTKWSVHCKVLDN-QKSKRERDVVLTERKRR-QLSNDEARCTLLKRITRPQPV 741
            D VS    PP   + K +P   LP+P  A    D E+QI S       E   +S A                 +  D EC+  G R G+R   DYPHFRF C    FK+ RA  KE +C  C+CY+CD+LAS+C +W  H K +DN  K + ER+  L  R+RR Q  +  AR   + R TRP PV
Sbjct:  702 DLVSSDSSPPPTPVRK-RPRVSLPVPDIASSPSDGELQIVSHVVRGASETYDLSQADPTPTQTXXXXXXXXXTNPTDVECV--GTRVGVRALVDYPHFRFQCVVEAFKRQRAAKKERYCARCFCYVCDILASECKEWPAHAKAVDNVHKWRVERESRLEMRRRRKQAESPTARRPAIARYTRPAPV 884          
BLAST of Gchil2372.t1 vs. uniprot
Match: A0A7S3Q3D4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3D4_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.540e-8
Identity = 37/90 (41.11%), Postives = 46/90 (51.11%), Query Frame = 0
Query:  126 VTLKKGIQPLEDYAHPRYACSRLPF-------------TAQSAPTHCPKCFCFVCDVPAAQCQQWP-DHCRAMDKPEWRRKRRNVRNAAG 201
            VT      PL ++ HPR+ C    F             T +S    C KC+C+VCD+PA+QCQ W  DHC A D   W+ KRRN RN  G
Sbjct:  306 VTRSTMKNPLTEFPHPRHLCGVHAFAKDVHVCSDVDKVTGKSNSQICDKCYCYVCDIPASQCQSWAGDHCHAFDSDGWKEKRRN-RNGNG 394          
BLAST of Gchil2372.t1 vs. uniprot
Match: UPI0010A2E9B2 (uncharacterized protein LOC114717341 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2E9B2)

HSP 1 Score: 63.2 bits (152), Expect = 9.150e-8
Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 0
Query:  125 VVTLKKGIQPLEDYAHPRYACSRLPFTAQSAPTHCPKCFCFVCDVPAAQCQQW------PDHCRAMDKPE-WRRKRR 194
            +V  +KG     DY HPR+ C+  PF++    +HC KC C+VCD+PA  C +W       DHC A +K E W+ +R+
Sbjct:   98 IVVGEKGQIACRDYPHPRHHCATFPFSSTPHESHCEKCHCYVCDLPAP-CPKWGTGISSTDHCHATEKVEMWKIQRK 173          
BLAST of Gchil2372.t1 vs. uniprot
Match: UPI0010A4BBCE (uncharacterized protein LOC114717327 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4BBCE)

HSP 1 Score: 65.9 bits (159), Expect = 2.290e-7
Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 0
Query:  125 VVTLKKGIQPLEDYAHPRYACSRLPFTAQSAPTHCPKCFCFVCDVPAAQCQQW------PDHCRAMDKPE-WRRKRRNVR 197
            +V  +KG     DY HPR+ C+  PF++    +HC KC C+VCD+PA  C +W       DHC A +K E W+ +R+N +
Sbjct:   98 IVVGEKGQIACRDYPHPRHHCATFPFSSTPHESHCEKCHCYVCDLPAP-CPKWGTGISSTDHCHATEKVEMWKIQRKNFK 176          
The following BLAST results are available for this feature:
BLAST of Gchil2372.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IV61_9FLOR6.790e-7452.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IVA2_9FLOR3.240e-4238.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIC1_CHOCR2.370e-1738.17SET domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A7S3Q3D4_9STRA4.540e-841.11Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
UPI0010A2E9B29.150e-840.26uncharacterized protein LOC114717341 n=1 Tax=Proso... [more]
UPI0010A4BBCE2.290e-740.00uncharacterized protein LOC114717327 n=1 Tax=Proso... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 207..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..585
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 455..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..287
NoneNo IPR availablePANTHERPTHR33443:SF9SUBFAMILY NOT NAMEDcoord: 125..208
coord: 623..714
NoneNo IPR availablePANTHERPTHR33443ZGC:112980coord: 125..208
coord: 623..714

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:189799..193044 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2372.t1Gchil2372.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 189799..193044 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2372.t1 ID=Gchil2372.t1|Name=Gchil2372.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=829bp
MPQVIDLTTSESEAPRVPRVRRSRPRPVPNDPDLCIVSESIRPLDSPSPS
PSPSPSPQPQPSVAASHRTEAPPSTSASASASASASAFASASASAPAVAP
AASPKSPASSKKRKRCARDDSPPQVVTLKKGIQPLEDYAHPRYACSRLPF
TAQSAPTHCPKCFCFVCDVPAAQCQQWPDHCRAMDKPEWRRKRRNVRNAA
GLYDRGIDQLAKEARRLEESARADSERRSVLEALGEHRNLADIIAEQEHI
ASQYNRSAAPNGPLHHAHPLSQAQASPHSHVAAAAAQPVEPPLPALLPHA
LPVPRNLPVPRNLPVPRALPVQRGNGVYNRSAPPRLANSMSLPPLAQLCE
QLRATQPPAAPPTRATLPRRALAANEYSFNTQMLAPLGLLPSALGANGGG
SFNAQMLAPLGLAPALGADGAGSLNASMLTPIDLFGANSADETESEKGEA
FSGDESDESPQDEDLSDDTQEEEEQEELKELKELPSLQMTPKLRAGCGRD
GAEETGTRRTQSPAGRNEGAKGDGQSTVGRAAPNSGTHDDVMAVPNATPT
AAPNAPPTAAPNASSDAPPTAAPDDVSKPVYPPGRVIAKIQPTEILPLPP
DAFEDDEIQITSVTNNKTREGTKVSTAASESRADQECIPIGERQGIRPNR
DYPHFRFTCDTFPFKKVRARTKELFCDFCYCYICDVLASDCTKWSVHCKV
LDNQKSKRERDVVLTERKRRQLSNDEARCTLLKRITRPQPVHDFEYEHLV
ELPNDEEEFEDDGCPHSASEDEQPSMPIDFDHGHLMHSIQRVRIAGKGSK
LERMVDTNPHTETYVTFRQGVSAYADLL*
back to top