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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2903.EOD16012 |
| Max annot lvl | 2903.EOD16012|- |
| Evalue | 1.23e-08 |
| EggNOG OGs | KOG1513@1|root,KOG1513@2759|Eukaryota |
| Description | cellular response to interleukin-11 |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil2372.t1 ID=Gchil2372.t1|Name=Gchil2372.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=829bp MPQVIDLTTSESEAPRVPRVRRSRPRPVPNDPDLCIVSESIRPLDSPSPS PSPSPSPQPQPSVAASHRTEAPPSTSASASASASASAFASASASAPAVAP AASPKSPASSKKRKRCARDDSPPQVVTLKKGIQPLEDYAHPRYACSRLPF TAQSAPTHCPKCFCFVCDVPAAQCQQWPDHCRAMDKPEWRRKRRNVRNAA GLYDRGIDQLAKEARRLEESARADSERRSVLEALGEHRNLADIIAEQEHI ASQYNRSAAPNGPLHHAHPLSQAQASPHSHVAAAAAQPVEPPLPALLPHA LPVPRNLPVPRNLPVPRALPVQRGNGVYNRSAPPRLANSMSLPPLAQLCE QLRATQPPAAPPTRATLPRRALAANEYSFNTQMLAPLGLLPSALGANGGG SFNAQMLAPLGLAPALGADGAGSLNASMLTPIDLFGANSADETESEKGEA FSGDESDESPQDEDLSDDTQEEEEQEELKELKELPSLQMTPKLRAGCGRD GAEETGTRRTQSPAGRNEGAKGDGQSTVGRAAPNSGTHDDVMAVPNATPT AAPNAPPTAAPNASSDAPPTAAPDDVSKPVYPPGRVIAKIQPTEILPLPP DAFEDDEIQITSVTNNKTREGTKVSTAASESRADQECIPIGERQGIRPNR DYPHFRFTCDTFPFKKVRARTKELFCDFCYCYICDVLASDCTKWSVHCKV LDNQKSKRERDVVLTERKRRQLSNDEARCTLLKRITRPQPVHDFEYEHLV ELPNDEEEFEDDGCPHSASEDEQPSMPIDFDHGHLMHSIQRVRIAGKGSK LERMVDTNPHTETYVTFRQGVSAYADLL* back to topspliced messenger RNA >Gchil2372.t1 ID=Gchil2372.t1|Name=Gchil2372.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2487bp|location=Sequence derived from alignment at tig00004400_pilon:189799..193044- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGCCGCAAGTCATCGACCTCACCACTTCCGAATCGGAGGCGCCGCGCGT GCCGCGCGTGCGGCGCAGTCGTCCCCGCCCGGTGCCTAACGACCCCGACT TGTGCATTGTGTCGGAGAGCATTCGTCCGCTTGACTCGCCGTCGCCATCG CCGTCGCCGTCGCCGTCGCCGCAACCGCAGCCGTCCGTCGCCGCTTCGCA CCGCACCGAAGCGCCGCCGTCTACTTCTGCTTCCGCTTCCGCCTCCGCTT CCGCTTCCGCTTTCGCTTCCGCTTCCGCTTCCGCGCCCGCCGTTGCGCCT GCCGCCTCGCCCAAGTCGCCGGCCTCGTCCAAAAAGAGGAAGAGATGCGC CCGCGACGACTCCCCGCCGCAGGTGGTCACGCTCAAGAAGGGCATACAAC CGCTAGAGGACTACGCCCACCCTCGCTACGCCTGCTCCCGTCTGCCGTTC ACCGCGCAGTCCGCCCCAACACATTGCCCCAAGTGTTTTTGCTTTGTGTG CGATGTGCCCGCCGCGCAGTGCCAACAATGGCCCGACCACTGCCGCGCCA TGGACAAGCCCGAGTGGCGGCGCAAGAGAAGGAACGTCAGAAATGCCGCC GGTCTCTATGACAGGGGCATCGATCAGCTGGCCAAGGAGGCTCGTCGTCT CGAGGAGAGCGCCAGGGCCGACTCGGAGAGACGGTCTGTGTTGGAGGCGC TGGGCGAACACAGAAATCTCGCCGACATCATCGCCGAGCAGGAGCACATC GCCTCGCAGTACAACCGGAGCGCCGCCCCCAATGGCCCACTTCATCATGC GCACCCTCTGTCACAAGCGCAAGCCTCCCCACACTCCCACGTCGCCGCCG CCGCCGCCCAACCTGTGGAACCGCCGCTGCCAGCGTTGCTCCCACACGCT CTTCCGGTTCCGCGCAATCTTCCGGTTCCGCGCAATCTTCCGGTTCCGCG CGCTCTTCCCGTGCAGCGCGGCAACGGGGTGTACAATCGAAGCGCACCGC CGCGTTTGGCCAACAGCATGTCGCTTCCTCCTCTGGCGCAGCTGTGCGAA CAGCTGCGAGCGACACAGCCGCCGGCAGCGCCGCCGACGCGTGCCACACT GCCGCGTCGTGCGCTTGCGGCAAATGAATACTCTTTCAACACCCAGATGT TGGCACCGCTTGGCTTGCTGCCGAGCGCACTTGGCGCAAATGGAGGGGGC TCCTTCAACGCCCAGATGCTGGCCCCCCTTGGCTTGGCACCTGCACTTGG TGCAGATGGAGCTGGGTCGCTCAATGCCAGTATGCTCACTCCGATTGACT TGTTCGGCGCCAATTCGGCCGATGAAACCGAAAGCGAGAAAGGCGAAGCC TTCTCCGGCGACGAGTCTGATGAATCGCCTCAGGATGAAGATTTATCAGA CGATACACAAGAGGAGGAAGAGCAGGAAGAGCTGAAAGAGCTGAAAGAGC TGCCAAGCTTACAAATGACGCCGAAGCTCAGAGCGGGGTGTGGCAGGGAT GGGGCGGAAGAAACAGGCACGCGGAGAACGCAGTCGCCTGCAGGGCGTAA CGAGGGCGCCAAGGGAGATGGTCAATCGACTGTGGGGCGTGCGGCGCCGA ATTCAGGAACGCACGACGATGTCATGGCCGTGCCAAACGCAACACCAACC GCAGCCCCGAACGCGCCACCGACCGCAGCACCAAACGCGTCATCAGATGC GCCACCAACGGCAGCGCCAGACGACGTTTCAAAGCCAGTATACCCTCCAG GAAGAGTGATTGCCAAAATACAACCCACCGAGATATTACCACTGCCACCC GATGCATTCGAAGATGATGAAATACAAATCACAAGCGTCACTAACAACAA GACAAGGGAGGGAACAAAAGTGAGCACCGCTGCGTCGGAAAGCCGTGCAG ACCAGGAGTGCATTCCAATCGGTGAGCGACAGGGGATACGTCCGAACCGT GATTATCCGCACTTTCGATTCACATGTGATACTTTTCCTTTCAAGAAGGT GCGCGCACGAACAAAAGAACTGTTCTGCGACTTTTGCTATTGTTACATCT GTGATGTGTTGGCTTCGGACTGCACCAAGTGGAGCGTGCACTGCAAAGTG CTTGATAATCAAAAGAGCAAACGAGAACGCGATGTGGTGCTAACCGAGCG AAAAAGAAGACAACTCAGTAATGATGAAGCCCGATGTACACTGTTGAAAC GCATCACTCGACCACAGCCTGTACATGACTTCGAATATGAGCATTTGGTT GAACTACCGAACGATGAGGAAGAATTTGAAGATGATGGCTGTCCGCATAG CGCCAGTGAAGACGAACAACCTTCCATGCCCATTGACTTTGATCATGGTC ATTTGATGCACTCAATTCAACGCGTTCGCATCGCCGGTAAGGGATCCAAG TTGGAGCGCATGGTCGACACAAATCCACACACTGAAACTTATGTCACCTT TCGCCAGGGCGTCTCTGCCTACGCTGATCTGCTGTGA back to topprotein sequence of Gchil2372.t1 >Gchil2372.t1 ID=Gchil2372.t1|Name=Gchil2372.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=829bp
MPQVIDLTTSESEAPRVPRVRRSRPRPVPNDPDLCIVSESIRPLDSPSPS PSPSPSPQPQPSVAASHRTEAPPSTSASASASASASAFASASASAPAVAP AASPKSPASSKKRKRCARDDSPPQVVTLKKGIQPLEDYAHPRYACSRLPF TAQSAPTHCPKCFCFVCDVPAAQCQQWPDHCRAMDKPEWRRKRRNVRNAA GLYDRGIDQLAKEARRLEESARADSERRSVLEALGEHRNLADIIAEQEHI ASQYNRSAAPNGPLHHAHPLSQAQASPHSHVAAAAAQPVEPPLPALLPHA LPVPRNLPVPRNLPVPRALPVQRGNGVYNRSAPPRLANSMSLPPLAQLCE QLRATQPPAAPPTRATLPRRALAANEYSFNTQMLAPLGLLPSALGANGGG SFNAQMLAPLGLAPALGADGAGSLNASMLTPIDLFGANSADETESEKGEA FSGDESDESPQDEDLSDDTQEEEEQEELKELKELPSLQMTPKLRAGCGRD GAEETGTRRTQSPAGRNEGAKGDGQSTVGRAAPNSGTHDDVMAVPNATPT AAPNAPPTAAPNASSDAPPTAAPDDVSKPVYPPGRVIAKIQPTEILPLPP DAFEDDEIQITSVTNNKTREGTKVSTAASESRADQECIPIGERQGIRPNR DYPHFRFTCDTFPFKKVRARTKELFCDFCYCYICDVLASDCTKWSVHCKV LDNQKSKRERDVVLTERKRRQLSNDEARCTLLKRITRPQPVHDFEYEHLV ELPNDEEEFEDDGCPHSASEDEQPSMPIDFDHGHLMHSIQRVRIAGKGSK LERMVDTNPHTETYVTFRQGVSAYADLL* back to topmRNA from alignment at tig00004400_pilon:189799..193044- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil2372.t1 ID=Gchil2372.t1|Name=Gchil2372.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=3246bp|location=Sequence derived from alignment at tig00004400_pilon:189799..193044- (Gracilaria chilensis NLEC103_M9 male) ATGCCGCAAGTCATCGACCTCACCACTTCCGAATCGGAGGCGCCGCGCGT
GCCGCGCGTGCGGCGCAGTCGTCCCCGCCCGGTGCCTAACGACCCCGACT
TGTGCATTGTGTCGGAGAGCATTCGTCCGCTTGACTCGCCGTCGCCATCG
CCGTCGCCGTCGCCGTCGCCGCAACCGCAGCCGTCCGTCGCCGCTTCGCA
CCGCACCGAAGCGCCGCCGTCTACTTCTGCTTCCGCTTCCGCCTCCGCTT
CCGCTTCCGCTTTCGCTTCCGCTTCCGCTTCCGCGCCCGCCGTTGCGCCT
GCCGCCTCGCCCAAGTCGCCGGCCTCGTCCAAAAAGAGGAAGAGATGCGC
CCGCGACGACTCCCCGCCGCAGGTGGTCACGCTCAAGAAGGGCATACAAC
CGCTAGAGGACTACGCCCACCCTCGCTACGCCTGCTCCCGTCTGCCGTTC
ACCGCGCAGTCCGCCCCAACACATTGCCCCAAGTGTTTTTGCTTTGTGTG
CGATGTGCCCGCCGCGCAGTGCCAACAATGGCCCGACCACTGCCGCGCCA
TGGACAAGCCCGAGTGGCGGCGCAAGAGAAGGAACGTCAGAAATGCCGCC
GGTCTCTATGACAGGGGCATCGATCAGCTGGCCAAGGAGGCTCGTCGTCT
CGAGGAGAGCGCCAGGGCCGACTCGGAGAGACGGTCTGTGTTGGAGGCGC
TGGGCGAACACAGAAATCTCGCCGACATCATCGCCGAGCAGGAGCACATC
GCCTCGCAGTACAACCGGAGCGCCGCCCCCAATGGCCCACTTCATCATGC
GCACCCTCTGTCACAAGCGCAAGCCTCCCCACACTCCCACGTCGCCGCCG
CCGCCGCCCAACCTGTGGAACCGCCGCTGCCAGCGTTGCTCCCACACGCT
CTTCCGGTTCCGCGCAATCTTCCGGTTCCGCGCAATCTTCCGGTTCCGCG
CGCTCTTCCCGTGCAGCGCGGCAACGGGGTGTACAATCGAAGCGCACCGC
CGCGTTTGGCCAACAGCATGTCGCTTCCTCCTCTGGCGCAGCTGTGCGAA
CAGCTGCGAGCGACACAGCCGCCGGCAGCGCCGCCGACGCGTGCCACACT
GCCGCGTCGTGCGCTTGCGGCAAATGAATACTCTTTCAACACCCAGATGT
TGGCACCGCTTGGCTTGCTGCCGAGCGCACTTGGCGCAAATGGAGGGGGC
TCCTTCAACGCCCAGATGCTGGCCCCCCTTGGCTTGGCACCTGCACTTGG
TGCAGATGGAGCTGGGTCGCTCAATGCCAGTATGCTCACTCCGATTGACT
TGTTCGGCGCCAATTCGGCCGATGAAACCGAAAGCGAGAAAGGCGAAGCC
TTCTCCGGCGACGAGTCTGATGAATCGCCTCAGGATGAAGATTTATCAGA
CGATACACAAGAGGAGGAAGAGCAGGAAGAGCTGAAAGAGCTGAAAGAGC
TGCCAAGCTTACAAATGACGCCGAAGCTCAGAGCGGGGTGTGGCAGGGAT
GGGGCGGAAGAAACAGGCACGCGGAGAACGCAGTCGCCTGCAGGGCGTAA
CGAGGGCGCCAAGGGAGATGGTCAATCGACTGTGGGGCGTGCGGCGCCGA
ATTCAGGAACGCGTGCGCACGCCGCCTCGATGAACATCCTCTACTTGCGG
CGTCCTGCTGAGAGGACGAGAGGCAGGAAGCGGTCCAGATCCAGGACCAC
CGAGCATAGTGGGGGGAGCTCGCGGCCTAGGGGGCACAAGAGACGGAGGA
CAGGCGATTCAGGACGGAGGTAGCGGCGAGAGCGCGAGAGTCGGGGGAGA
ACAGGGGGGGGGGGGGGGGTTTTATAAGCTGCTGCGGGTAGCAGCCAGTG
TCGCGCGATGTGGCACACATGTACAACTTTTACGCATGACGTCGGGCATT
TGAACTCCACTGCGGACGCCCACACCGGACGTGGGGCTACTTGGTTCAAC
CAACCAAGTTGGTTATCGATGGTGGCGCGACGGTGTATTTTTGCAGAGCA
CATGCGGCTCATTTTGTTTTACGCAAGTGGTAGCAAACACTAACATCTAA
AAGCATTTATCACTTTGATATGAATCAGCCCGACTCAGTGCAAGCTAGAT
AGTCTCTCGCGTGCGGCTCGCGACCCAACTTGGTTCATTTCGCGCTCGGA
CGAAGAAGCCTGCGTTGTTGGTGACAAGTGTTGTTTAGTTTAAATCTTTT
CGATCCTTTTAGTAACCAAAGAGCAACGCTGCCGGCTTGCCCTCATCCTC
ACAAGCTTGGTACCGCCACAACGCTCAGCTCTCCAGCTTCTAGCTTTGTT
GTGCCTGCTGTCGAGCAGGATCCGCTTTACACCCATGGACAACGAAGTCA
TTGTTTTGTCTGACAACTCAGACGACGATGTCATGGCCGTGCCAAACGCA
ACACCAACCGCAGCCCCGAACGCGCCACCGACCGCAGCACCAAACGCGTC
ATCAGATGCGCCACCAACGGCAGCGCCAGACGACGTTTCAAAGCCAGTAT
ACCCTCCAGGAAGAGTGATTGCCAAAATACAACCCACCGAGATATTACCA
CTGCCACCCGATGCATTCGAAGATGATGAAATACAAATCACAAGCGTCAC
TAACAACAAGACAAGGGAGGGAACAAAAGTGAGCACCGCTGCGTCGGAAA
GCCGTGCAGACCAGGAGTGCATTCCAATCGGTGAGCGACAGGGGATACGT
CCGAACCGTGATTATCCGCACTTTCGATTCACATGTGATACTTTTCCTTT
CAAGAAGGTGCGCGCACGAACAAAAGAACTGTTCTGCGACTTTTGCTATT
GTTACATCTGTGATGTGTTGGCTTCGGACTGCACCAAGTGGAGCGTGCAC
TGCAAAGTGCTTGATAATCAAAAGAGCAAACGAGAACGCGATGTGGTGCT
AACCGAGCGAAAAAGAAGACAACTCAGTAATGATGAAGCCCGATGTACAC
TGTTGAAACGCATCACTCGACCACAGCCTGTACATGACTTCGAATATGAG
CATTTGGTTGAACTACCGAACGATGAGGAAGAATTTGAAGATGATGGCTG
TCCGCATAGCGCCAGTGAAGACGAACAACCTTCCATGCCCATTGACTTTG
ATCATGGTCATTTGATGCACTCAATTCAACGCGTTCGCATCGCCGGTAAG
GGATCCAAGTTGGAGCGCATGGTCGACACAAATCCACACACTGAAACTTA
TGTCACCTTTCGCCAGGGCGTCTCTGCCTACGCTGATCTGCTGTGA back to topCoding sequence (CDS) from alignment at tig00004400_pilon:189799..193044- >Gchil2372.t1 ID=Gchil2372.t1|Name=Gchil2372.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2487bp|location=Sequence derived from alignment at tig00004400_pilon:189799..193044- (Gracilaria chilensis NLEC103_M9 male) ATGCCGCAAGTCATCGACCTCACCACTTCCGAATCGGAGGCGCCGCGCGT GCCGCGCGTGCGGCGCAGTCGTCCCCGCCCGGTGCCTAACGACCCCGACT TGTGCATTGTGTCGGAGAGCATTCGTCCGCTTGACTCGCCGTCGCCATCG CCGTCGCCGTCGCCGTCGCCGCAACCGCAGCCGTCCGTCGCCGCTTCGCA CCGCACCGAAGCGCCGCCGTCTACTTCTGCTTCCGCTTCCGCCTCCGCTT CCGCTTCCGCTTTCGCTTCCGCTTCCGCTTCCGCGCCCGCCGTTGCGCCT GCCGCCTCGCCCAAGTCGCCGGCCTCGTCCAAAAAGAGGAAGAGATGCGC CCGCGACGACTCCCCGCCGCAGGTGGTCACGCTCAAGAAGGGCATACAAC CGCTAGAGGACTACGCCCACCCTCGCTACGCCTGCTCCCGTCTGCCGTTC ACCGCGCAGTCCGCCCCAACACATTGCCCCAAGTGTTTTTGCTTTGTGTG CGATGTGCCCGCCGCGCAGTGCCAACAATGGCCCGACCACTGCCGCGCCA TGGACAAGCCCGAGTGGCGGCGCAAGAGAAGGAACGTCAGAAATGCCGCC GGTCTCTATGACAGGGGCATCGATCAGCTGGCCAAGGAGGCTCGTCGTCT CGAGGAGAGCGCCAGGGCCGACTCGGAGAGACGGTCTGTGTTGGAGGCGC TGGGCGAACACAGAAATCTCGCCGACATCATCGCCGAGCAGGAGCACATC GCCTCGCAGTACAACCGGAGCGCCGCCCCCAATGGCCCACTTCATCATGC GCACCCTCTGTCACAAGCGCAAGCCTCCCCACACTCCCACGTCGCCGCCG CCGCCGCCCAACCTGTGGAACCGCCGCTGCCAGCGTTGCTCCCACACGCT CTTCCGGTTCCGCGCAATCTTCCGGTTCCGCGCAATCTTCCGGTTCCGCG CGCTCTTCCCGTGCAGCGCGGCAACGGGGTGTACAATCGAAGCGCACCGC CGCGTTTGGCCAACAGCATGTCGCTTCCTCCTCTGGCGCAGCTGTGCGAA CAGCTGCGAGCGACACAGCCGCCGGCAGCGCCGCCGACGCGTGCCACACT GCCGCGTCGTGCGCTTGCGGCAAATGAATACTCTTTCAACACCCAGATGT TGGCACCGCTTGGCTTGCTGCCGAGCGCACTTGGCGCAAATGGAGGGGGC TCCTTCAACGCCCAGATGCTGGCCCCCCTTGGCTTGGCACCTGCACTTGG TGCAGATGGAGCTGGGTCGCTCAATGCCAGTATGCTCACTCCGATTGACT TGTTCGGCGCCAATTCGGCCGATGAAACCGAAAGCGAGAAAGGCGAAGCC TTCTCCGGCGACGAGTCTGATGAATCGCCTCAGGATGAAGATTTATCAGA CGATACACAAGAGGAGGAAGAGCAGGAAGAGCTGAAAGAGCTGAAAGAGC TGCCAAGCTTACAAATGACGCCGAAGCTCAGAGCGGGGTGTGGCAGGGAT GGGGCGGAAGAAACAGGCACGCGGAGAACGCAGTCGCCTGCAGGGCGTAA CGAGGGCGCCAAGGGAGATGGTCAATCGACTGTGGGGCGTGCGGCGCCGA ATTCAGGAACGCACGACGATGTCATGGCCGTGCCAAACGCAACACCAACC GCAGCCCCGAACGCGCCACCGACCGCAGCACCAAACGCGTCATCAGATGC GCCACCAACGGCAGCGCCAGACGACGTTTCAAAGCCAGTATACCCTCCAG GAAGAGTGATTGCCAAAATACAACCCACCGAGATATTACCACTGCCACCC GATGCATTCGAAGATGATGAAATACAAATCACAAGCGTCACTAACAACAA GACAAGGGAGGGAACAAAAGTGAGCACCGCTGCGTCGGAAAGCCGTGCAG ACCAGGAGTGCATTCCAATCGGTGAGCGACAGGGGATACGTCCGAACCGT GATTATCCGCACTTTCGATTCACATGTGATACTTTTCCTTTCAAGAAGGT GCGCGCACGAACAAAAGAACTGTTCTGCGACTTTTGCTATTGTTACATCT GTGATGTGTTGGCTTCGGACTGCACCAAGTGGAGCGTGCACTGCAAAGTG CTTGATAATCAAAAGAGCAAACGAGAACGCGATGTGGTGCTAACCGAGCG AAAAAGAAGACAACTCAGTAATGATGAAGCCCGATGTACACTGTTGAAAC GCATCACTCGACCACAGCCTGTACATGACTTCGAATATGAGCATTTGGTT GAACTACCGAACGATGAGGAAGAATTTGAAGATGATGGCTGTCCGCATAG CGCCAGTGAAGACGAACAACCTTCCATGCCCATTGACTTTGATCATGGTC ATTTGATGCACTCAATTCAACGCGTTCGCATCGCCGGTAAGGGATCCAAG TTGGAGCGCATGGTCGACACAAATCCACACACTGAAACTTATGTCACCTT TCGCCAGGGCGTCTCTGCCTACGCTGATCTGCTGTGA back to top
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