Gchil2304.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2304.t1
Unique NameGchil2304.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length454
Homology
BLAST of Gchil2304.t1 vs. uniprot
Match: A0A2V3J1R8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1R8_9FLOR)

HSP 1 Score: 266 bits (679), Expect = 1.780e-81
Identity = 166/396 (41.92%), Postives = 235/396 (59.34%), Query Frame = 0
Query:    1 MEVLLEPGQISSIINVITDALVAISGFGLISSLNAYGRWKLYKNGKADKDLHFHETTIIPAILNAFRLRKSSRMVALLLCIQAIICAIIISLKAVAPIGVSQSKKFRVSRNQTLKGDSLCNQIDPSYPLAQMGEAKRRILVHFESGGDVLSVGRTGKNSDALLLEDKNSSYGLPFVVNEFNKSIKIKVSAPIGGVN-ISLDVSQVVKKDPSS-GPTYQNEF-----AAVFNRLHYPDAWTQYTEGPLYIIY-----LFRGVARERYAFIKCSVPILQLQQGHSSLVTGACNVANIERDTIKSGILLTISPVPQLLRDLDQEYKTLSISNLGHRWIMLYDTAKILGLEPCGDSYIAYLPFSEVSEVSIIIVSALGSIAAACMVAAIFSFGLTRRTFD 384
            MEV L PG+ + IIN+ITDAL  I+ F LIS LNAYGRWKL++ GK   D+HFH  +   A L+  RLR+SS  V +LL IQ II A + +L ++APIG+S+SK   V R  T+ G++LC + +  Y    +G A  R++ HF +GG V+SVG+TG+N DA+LLE++ SS G   VV++++   +I VS   G ++  +L+++Q ++         Y N+F         N    P+      +GP Y+I      L      E+ AF +C+VP ++LQ G    V G C+VA IER   K+G   +       L+ LD  +K L +S LG R  M+ D A IL   PCGD+Y+AYLP SEVS VSI I+ +LG+I+    V AI SF +TR TF+
Sbjct:    1 MEVSLSPGKTAFIINIITDALALIASFSLISILNAYGRWKLHQKGKVSMDMHFHNMSFGGAFLSLVRLRQSSARVVILLIIQTIILAFLRTLMSLAPIGISESKNLSVHRYHTIPGEALCYR-EGLYNSEMIGMATERVIKHFNAGGKVISVGKTGRNHDAILLENERSSLGHAVVVDKWDMEARINVSD--GNISTFTLNLTQFLRNTTGYLHSVYSNDFFLTHSVVPMNTTPLPNNGA-IVDGPFYVIVCTHNPLVNENKMEKCAFSRCAVPHVELQPGEVVSVRGNCSVATIERQAFKAGAFRSYYGSASPLKYLDISFKGLDVSELGKRSQMVGDLAFILRSRPCGDTYVAYLPPSEVSWVSIAIICSLGTISLVVSVVAIMSFSITRNTFN 392          
BLAST of Gchil2304.t1 vs. uniprot
Match: A0A2V3IL84_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL84_9FLOR)

HSP 1 Score: 202 bits (513), Expect = 9.460e-58
Identity = 125/318 (39.31%), Postives = 177/318 (55.66%), Query Frame = 0
Query:  141 VHFESGGDVLSVGRTGKNSDALLLEDKNSSYGLPFVVNEFNKSIKIKVSAPIGGVNISLDVSQVVKKDPSSGPTYQNEFAAVFNRLHYPDAWTQYTEGPLYIIYLFRGVARERY---AFIKCSVPILQLQQGHSSLVTGACNVANIERDTIKSGILLTISPVPQLLRDLDQEYKTLSISNLGHRWIMLYDTAKILGLEPCGDSYIAYLPFSEVSEVSIIIVSALGSIAAACMVAAIFSFGLTRRTFDWNGSYERIINLAGNSDSIQLRSCWDISTNSKANVVIT--PTTGPEIGYTVQVVPKGFQCTPVPKAEVKLIK 453
            +HF +GG +L VGRTG+N DALL+ED+  S+G   ++ E     KI VS+P G   + ++    ++            ++ +     Y     Q TEGPLY +    G   E Y   AF KC+VP + L      LV G C+VA +ER T KSGI     P    LR LD  +  + +S LG   IM+ D A  L  +PCGD+Y+AYLP S +S  S++IV ALG  A A  VAAI S  +TR TF+WNGSY+R+++LA +S+ +++    D +  + A+VVI   PT   + G  V++VP      PVPKA  KL++
Sbjct:    1 MHFNTGGKILRVGRTGQNLDALLVEDEEYSHGHAHLLKESFIEAKINVSSPRGNYKVDINAWDFLENTTGYPEDLTAHYSTIVRNATYLPT-IQITEGPLYFVICIFGHGTENYMKCAFGKCAVPRVDLPYSRFRLVRGNCSVAFLERSTAKSGIFRGFEPEASSLRYLDLAFGHVDVSFLGQGSIMINDLAITLQSKPCGDTYVAYLPPSNISRTSVVIVCALGITALASCVAAIMSLFITRHTFNWNGSYQRVVSLAASSEQMRVFGRNDFAAVATADVVIEERPTHHGK-GLCVRIVPTDATSNPVPKASRKLLQ 316          
BLAST of Gchil2304.t1 vs. uniprot
Match: A0A2V3IYY8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYY8_9FLOR)

HSP 1 Score: 95.5 bits (236), Expect = 1.100e-19
Identity = 52/115 (45.22%), Postives = 75/115 (65.22%), Query Frame = 0
Query:  306 LDQEYKTLSISNLGHRWIMLYDTAKILGLEPCGDSYIAYLPFSEVSEVSIIIVSALGSIAAACMVAAIFSFGLTRRTFDWNGSYERIINLAGNSDSIQLRSCWDISTNSKANVVI 420
            LD+ +  L ++ LG R IM+ D ++IL    C ++Y+AYLP S+VS VSI I+ +LGSI+    VAAI SF +T+ T +WNGS +R+INLA +SD I L    D +     +VV+
Sbjct:    3 LDEAFNALDVAELGQRSIMVSDLSEILRSPKCSNTYVAYLPLSKVSWVSIAILCSLGSISVFWCVAAIISFFVTKDTINWNGSCDRVINLAASSDPIGLCDHKDFTAVGSTDVVM 117          
The following BLAST results are available for this feature:
BLAST of Gchil2304.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J1R8_9FLOR1.780e-8141.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IL84_9FLOR9.460e-5839.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IYY8_9FLOR1.100e-1945.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 355..378
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..354
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 379..453
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..74
NoneNo IPR availableTMHMMTMhelixcoord: 75..97
NoneNo IPR availableTMHMMTMhelixcoord: 355..377
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004419_piloncontigtig00004419_pilon:1512402..1513763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2304.t1Gchil2304.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004419_pilon 1512402..1513763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2304.t1 ID=Gchil2304.t1|Name=Gchil2304.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=454bp
MEVLLEPGQISSIINVITDALVAISGFGLISSLNAYGRWKLYKNGKADKD
LHFHETTIIPAILNAFRLRKSSRMVALLLCIQAIICAIIISLKAVAPIGV
SQSKKFRVSRNQTLKGDSLCNQIDPSYPLAQMGEAKRRILVHFESGGDVL
SVGRTGKNSDALLLEDKNSSYGLPFVVNEFNKSIKIKVSAPIGGVNISLD
VSQVVKKDPSSGPTYQNEFAAVFNRLHYPDAWTQYTEGPLYIIYLFRGVA
RERYAFIKCSVPILQLQQGHSSLVTGACNVANIERDTIKSGILLTISPVP
QLLRDLDQEYKTLSISNLGHRWIMLYDTAKILGLEPCGDSYIAYLPFSEV
SEVSIIIVSALGSIAAACMVAAIFSFGLTRRTFDWNGSYERIINLAGNSD
SIQLRSCWDISTNSKANVVITPTTGPEIGYTVQVVPKGFQCTPVPKAEVK
LIK*
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