Gchil2271.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2271.t1
Unique NameGchil2271.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length442
Homology
BLAST of Gchil2271.t1 vs. uniprot
Match: A0A2V3IME3_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME3_9FLOR)

HSP 1 Score: 327 bits (837), Expect = 7.400e-105
Identity = 177/412 (42.96%), Postives = 256/412 (62.14%), Query Frame = 0
Query:   31 YGPKCRDRRTFPYVSCEPQCAPYSENVHRLCQTKQQFGCLYRKCSQNNFQCSLTPETAAASECPNGDIQVRTVTLRPNFPVEFDLSVNVPAVDLDVVLLLDASESARARLNAVKSELLSFVRQLEGTAHIGVAIYGGEQSFDEKGIQVLSAAKEDVQSALTALENIPTFPDSPRTTLTALHSVQNSGAALSLRRWRTIVVLVGNTPGREPECGALFDRNSIPISLYSNSDGISVIPANLGEPGLDAILPPMQQCSNGFGPSEPQAVEAGQASKIAEKTQGEVINSVRADVLIDAVDRVRRRPNRTHQRKAGAQISISTASVEPVNRPYYPRRERVI-GCEDKVIVSSTGVPQFVSEPSRITGKVKLELPTGICQRGPFSCTIRVIDQVQGHEVMSHWSQPIVNEKKISIQAC 441
            +GP+CR +  FP+V+CE +C  Y  N    C  K QFGC Y+KCS ++++C+L P     + CPNG++ V+++ L  +F V+F+L++N+     DVVLL+D S S R  L A+K+EL SFVRQL G+A +GVA+YG E+S+DE G+ VLSA  + V  AL ALE+IP   D  RTT+TAL ++ +S A L+LR  + I+VL+G+ PGREP+C   ++R+ +      +S  ISV   +LG  GL++ LP    C NG    +P  +  GQA  I  +T GEV+  V A  L+ AVD VRRRP   + R  G+ I +S+AS      PY P  +R   GC +KV + ++G+P F+S P+ +T  V + LP G+C  GPF+C IRV++  +G E  S WS P  + + I I  C
Sbjct:   24 WGPQCRRKNVFPFVTCESKCFSYYPNFGSGCSQKAQFGCEYKKCSSSSYRCALNPAVEKDNPCPNGEVPVKSINLT-SF-VDFNLAINLRGYSTDVVLLIDTSSSTRPHLKAIKNELSSFVRQLNGSAKVGVAVYGSEESYDESGLSVLSAVTDYVDPALEALESIPETVDGTRTTITALKTLSSSVAGLNLRGNKRIIVLIGDRPGREPDCRNGYNRDMV----LPSSTMISV---SLGSDGLNSALPAPSACMNGSY-YDPSPIAVGQARDIVNRTNGEVVEIVTAASLLWAVDTVRRRPVYWYNRPPGSNIRVSSASFPLYRGPYTPPVQRYSNGCGNKVYLRTSGLPAFISAPAEVTASVHVALPKGVCIHGPFTCEIRVVEIRRGGEYPSSWSIPFEHFEVIKIHGC 425          
BLAST of Gchil2271.t1 vs. uniprot
Match: A0A2V3IEV7_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV7_9FLOR)

HSP 1 Score: 224 bits (570), Expect = 4.980e-66
Identity = 135/350 (38.57%), Postives = 194/350 (55.43%), Query Frame = 0
Query:  100 VRTVTLRPNFPVEFDLSVNVPAVDLDVVLLLDASESARARLNAVKSELLSFVRQLEGTAHIGVAIYGGEQSFDEKGIQVLSAAKEDVQSALTALENIPTFPDSPRTTLTALHSV---QNSGAALSLRRWRTIVVLVGNTPGREPEC--GALFDRNSIPISLYSNSDGISVIPANLGEPGLDAILPPMQQCSNGFGPSEPQAVEAGQASKIAEKTQGEVINSVRADVLIDAVDRVRRRP-NRTHQRKAGAQISISTASVEPVNRP--YYPRRERVIGCEDKVIVSSTGVPQFVSEPSRITGKVKLELPTGICQRGPFSCTIRVIDQVQGHEVMSHWSQPIVNEKKISIQAC 441
            V  VTLR +FP++  L +NVP    D+V+L+DAS+S RA+LN VK +L SFVR L    ++ VA YGGE    E G  V   A  DV  A  AL+NIP   D PRT++TA+ S+   Q+    L L   R I+VLVG+TPGREPEC  G   DR S       +S    V+  NL  PGL+A LP    C    G     A+  GQ +++A+ ++GE+I+ V +  L +++ ++R    N  H + +   +   T +      P  +  R     GC+D+VI+  + +P F   P ++TGK+ L LP GICQRGPF C + V ++++     SHWS P  +   I ++AC
Sbjct:    2 VNNVTLRHHFPIDISLDINVPGDTQDIVMLVDASQSTRAKLNNVKEQLKSFVRTLGDVGNVSVAFYGGESDMGETGYSVALKATSDVNRAAEALDNIPIVADGPRTSITAMWSIMQHQDGTIPLGLFANRRIIVLVGDTPGREPECRHGIKSDRMSF------SSQRTRVMVVNLASPGLNAALPAPAAC----GYITSAAIPEGQGTRLADTSEGELISQVTSSKLRESILKLRMNAANGLHGKGSHISVLSKTYTYTEYTCPSSFCARTITTKGCDDRVIIRKSNIPDFAHGPVQMTGKISLSLPAGICQRGPFYCEVEVKERLERFSY-SHWSLPQRHTHLIGVKAC 340          
BLAST of Gchil2271.t1 vs. uniprot
Match: A0A2V3IGT8_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGT8_9FLOR)

HSP 1 Score: 196 bits (498), Expect = 2.660e-54
Identity = 129/399 (32.33%), Postives = 198/399 (49.62%), Query Frame = 0
Query:   34 KCRDRRTFPYVSCEPQCAPYSENVHRLCQTKQQFGCLYRKCSQNNFQCSLTPETAAASECPNGDIQVRTVTLRPNFPVEFDLSVNVPAVDLDVVLLLDASESARARLNAVKSELLSFVRQLEGTAHIGVAIYGGEQSFDEKGIQVLSAAKEDVQSALTALENIPTFPDSPRT------TLTALHSVQNSGAALSLRRWRTIVVLVGNTPGREPECGALFDRNSIPISLYSNSDGISVIPANLGEPGLDAIL--PPMQQCSNGFGPSEPQAVEAGQASKIAEKTQGEVINSVRADVLIDAVDRVRRRPNRTHQRKAGAQISISTASVE--------PVNRPYYPRRERVIGCEDKVIVSS-TGVPQFVSEPSRITGKVKLELPTGICQRGPFSCTIRVID 415
            +CR    FP+VSC   C  +S      C  K QFGC  + C++N FQC++ P  +    CPN +I V  VTL P+ PVEF+L+ N+     DV+ L DAS S R+ L+A+K++L+ F+R +  T  +G+ +YG EQSF   G  VL       + A+ AL NIP  PD PRT      TL  L +V+        R    I +L+G+TPGRE  C A    +     +        ++ A++G PGL+A +  PP   C+    P     ++A QAS I+ +  G+V+  V  D L     ++R  P R +    G  ++++  +          PV  P         GC ++VI+S+    P  +  P++  G ++L L    C+ G F+C + + D
Sbjct:   21 RCRRNVVFPFVSCGNTCGWHSYQSIWKCCRKAQFGCRLQWCTRNGFQCAVDPSISPV--CPNNEIPVEEVTLIPHRPVEFNLAFNLSEYTRDVIFLFDASTSTRSSLDALKNDLIRFIRNVSSTYSVGIGLYGSEQSFGAAGYSVLQTVTPHSEEAVQALHNIPMLPDGPRTSMLALATLIGLRTVEGGIPNFGFRSQERIFLLIGDTPGREVPCDAPSFSDIRHDIINRRGPSNIILTASIGSPGLNAAISAPP---CNYHTIPEALNPIQAEQASDISIRG-GQVMTPVTFDTLYTTYHQIRSYPPRGYFPNWGRAVTVTQNTTSRGFGYFQMPVPIPQSD------GCNERVILSTPVSWPVPLQFPTKEVGTIQLALAPWACRNGSFTCEVVIKD 407          
BLAST of Gchil2271.t1 vs. uniprot
Match: A0A2V3IGI2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGI2_9FLOR)

HSP 1 Score: 191 bits (484), Expect = 1.930e-52
Identity = 139/388 (35.82%), Postives = 199/388 (51.29%), Query Frame = 0
Query:   34 KCRDRRTFPYVSCEPQCAPYSENVHRL-CQTKQQFGCLYRKCSQNNFQCSLTPETAAASECPNGDIQVRTVTLRPNFPVEFDLSVNVPAVDLDVVLLLDASESARARLNAVKSELLSFVRQLEGTA-HIGVAIYGGEQSFDEKGIQVLSAAKEDVQSALTAL---ENIPTFPDSPRTTLT-ALHSVQNSGAALSLRRWRTIVVLVGNTPGREPECGA-LFDRNSIPISLYSNSDGISVIPANLGEPGLDAILPPMQQCSNGFGPSEPQAVEAGQASKIAEKTQGEVINSVRADVLIDAVDRVRRRPNRTHQRKAGAQISISTASVEPVNRPYYPRRERVIGCEDKVIVSST-GVPQFVSEPSRITGKVKLELPTGICQRGPFSCTIRV 413
            +CR    FP+++    C           C    Q+G  +  C + +F CSL  E AA + CPN ++ V TV +  N P    L +NVP   LDV+LLLDA  S R R+ A+K +++SF+RQLE  A +I +++ G E+SFD++G  VL     +   A+ +L   E +P  PD PR +L   L S+ N+   +  R  + IVVLVG+T GREP C    FDR S P S +S     SV+  ++G+PGL+A LP    C+  F P   +AV A QAS IA  TQG  +    AD L+  V  V R       +  G  IS+     +P +     RR     C+ +V  +ST G   F++ P   T ++ + L    C  GPF C + V
Sbjct:   22 QCRQDFFFPHITSPFGCTGNFTGFQVSDCLVASQWGYEFSPCGEESFACSLKREIAANNSCPNAELPVSTVRVNLNRPTFVSLGINVPRPTLDVILLLDAVSSTRERIIALKPQIVSFIRQLEDVAENIHISVSGTEESFDQRGTSVLQRTTNNFAEAVQSLDEFERLPPIPDGPRASLRFLLPSITNT---VGFRSEQQIVVLVGDTSGREPTCVFDRFDRTSFP-SRFSGGQ-FSVVAVSIGDPGLNAPLPTQAPCTR-FTPFV-EAVTANQASTIANLTQGAFVEGFDADTLLQTVMNVSRNAPGNFGQPTGFDISVP----QPFSNF---RRPFPSVCDGRVQFNSTMGNRFFLAGPLETTVQLSISLANSGCMDGPFQCPVTV 395          
BLAST of Gchil2271.t1 vs. uniprot
Match: A0A2V3IDQ9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDQ9_9FLOR)

HSP 1 Score: 132 bits (333), Expect = 8.020e-31
Identity = 114/400 (28.50%), Postives = 174/400 (43.50%), Query Frame = 0
Query:   33 PKCRDRRTFPYVSCEPQCAPYSENVHRLCQTKQQFGCLYRKCSQNNFQCSLTPETAAASECPNGDIQVRTVTLRPNFPVEFDLSVNVPAVDLDVVLLLDASESARARLNAVKSELLSFVRQLEG--TAHIGVAIYGGEQSFDEKGIQVL--SAAKEDVQSALTALENIPTFPDS--PRTTLTALHSVQNSGAALSLR--RWRTIVVLVGNTPGREPECGAL-FDRNSIPISLYSNSDGISVIPANLGEPGLDAILPPMQQCS----------NGFGPSEPQAVEAGQASKIAEKTQGEVINSVRADVLIDAVDRVRRRPNRTHQRKAGAQISISTASVEPVNRPYYPRRERVIGCEDKVIVSSTGVPQFVSEPSRITGKVKLELPTGICQRGPFSCTIRV 413
            PKCR+   F +V CE      SE     C+  +Q GC+       +  C+L P+ A  + CPN +  V    L  + PV F +SVN+    L V+ L+DAS S R  L  V +E  +    +    +A I VA+Y GE SF   G   L   +   +V +   AL+ IP+      PRT L A+   + +   +  R    R IVV+ G+TPGR+P C    ++      S+++     ++I A++G+PGLD  L  + QC               P E + V AGQ S +   T+G ++  V A  L  A  RV   P R  +   G    ++                    C +++++ S  +P  V   S  T    + L    C  GPF C + +
Sbjct:   26 PKCREAGLFAHVLCEG----LSETQ---CEPAKQHGCI-----SLDGNCTLDPDLARINPCPNNEYPVNDFVLSLSNPVSFRMSVNLLDASLSVLFLVDASPSMRDHLPKVITEFSTLATAMTKKLSAIIAVAVYAGEASFSRYGPPYLPLQSMTSNVSAVRNALQFIPSLQMKTVPRTLLNAIDKARYA-QTIGWRGTNARRIVVVAGDTPGRDPTCTKSDYEPARTRFSIFNEFSETALIAASVGQPGLDGALAKLPQCPFSPSCSPVYCTPLPPDEGEQVAAGQLSALVNATKGLLLTGVDASALFRAALRVVNSPGRRFKAIDGVLYRLTAEYGYDT-------------CGNRIVIQSPSLPLRVPALSVTTVDFSVALSENGCDGGPFVCHLGI 399          
The following BLAST results are available for this feature:
BLAST of Gchil2271.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IME3_9FLOR7.400e-10542.96VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IEV7_9FLOR4.980e-6638.57VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGT8_9FLOR2.660e-5432.33VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGI2_9FLOR1.930e-5235.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IDQ9_9FLOR8.020e-3128.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 117..331
e-value: 1.7E-8
score: 36.5
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 121..240
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 125..215
e-value: 1.6E-5
score: 25.2
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 125..316
score: 9.830213
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..441
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004419_piloncontigtig00004419_pilon:493918..495243 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2271.t1Gchil2271.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004419_pilon 493918..495243 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2271.t1 ID=Gchil2271.t1|Name=Gchil2271.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=442bp
MSPSKTFLAVFAVLAFVSRSLGMLVDVDGPYGPKCRDRRTFPYVSCEPQC
APYSENVHRLCQTKQQFGCLYRKCSQNNFQCSLTPETAAASECPNGDIQV
RTVTLRPNFPVEFDLSVNVPAVDLDVVLLLDASESARARLNAVKSELLSF
VRQLEGTAHIGVAIYGGEQSFDEKGIQVLSAAKEDVQSALTALENIPTFP
DSPRTTLTALHSVQNSGAALSLRRWRTIVVLVGNTPGREPECGALFDRNS
IPISLYSNSDGISVIPANLGEPGLDAILPPMQQCSNGFGPSEPQAVEAGQ
ASKIAEKTQGEVINSVRADVLIDAVDRVRRRPNRTHQRKAGAQISISTAS
VEPVNRPYYPRRERVIGCEDKVIVSSTGVPQFVSEPSRITGKVKLELPTG
ICQRGPFSCTIRVIDQVQGHEVMSHWSQPIVNEKKISIQAC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf
IPR002035VWF_A