Gchil2152.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2152.t1
Unique NameGchil2152.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length480
Homology
BLAST of Gchil2152.t1 vs. uniprot
Match: A0A2V3J2F0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2F0_9FLOR)

HSP 1 Score: 98.2 bits (243), Expect = 3.130e-18
Identity = 125/510 (24.51%), Postives = 217/510 (42.55%), Query Frame = 0
Query:    5 PSWYLHSYKTALSILLAAAVHFKQALATQKANIFIDAQHRQDPLVQAVTLTTFNVLHL-----TPFKPQ--TVFHKGYLLSKWKSCSQQAKPKACIT-LPIHQD----RIAFLYTYKKERHAEYRLKSPQVSSRTNRSDSSVTTYR----------HAFGKAWFTLLFRCRRN--TIQQWNEVFDLTVPITDHYSIQTTLIKRCASGVSHPFLQVGFI--------QNDQLRLWDHNELDAIRVSASTAVTPLIIRLKNPAWALQHGKPSMKTTKQLLSISTRGVSSNGTFLQGDNK-MWLLYTCHQSGVASAYLKIDLGPWKALTMHFNKSCGGSVANGLNIGTTRKFK-DVIDNGITQPSF-----VLTPGNETSLQTLPASKRSLTVSVSNNGLDTLNMGRAHITLHNASVLEV------------RIRNWDTMALYHGHRRPLRLETKCKRNGTAVIQVSIPVLQHQAAEFWVRKLC-APL-----GKERTMVTTAAMLTVGVVVS 457
            P +    + T L++LL+ ++     LA   A  + DA  +++   +A  L T  +        T   P    VF +G +   WK  S Q    +  + LP HQD    R +F ++Y     A Y + SPQ +S    SD SV   +          H+     FT++  C+ +    +  N    +  P+ D  S   +  K C  GV H  L  G+         QN  ++         + V      T L +RL  PA + +    ++ T+   L+   +G    G   Q +   + +LY C   GV++  + I L P+++L   + K CGG    GL IGT    + DV++NG+T   +     + +   E  + ++ +S R     ++N G +++++    +T+  + V+              +++N   +A  H     LRL T CK+ G+++I V+IPV   +  EF + K C AP      G  RT  +   ++T+ +  S
Sbjct:    7 PPFSCALFPTLLTLLLSLSLG-TLTLAQTSAEQWPDADAQRNQTHKAFNLFTILLADEYEGVGTKLNPDYHIVFKEGTVHPHWKPVSNQTNSVSQPSQLPFHQDEYADRTSFEFSYAS--FASYEILSPQSTS----SDPSVARPKVIEFYDDDNEHSGS---FTIVHDCQIDPKAPRLRNVTISVVFPVVDSLSAVFSFQKTCGQGV-HQLLDFGYYEDPSNGPGQNPAVQFTPSQP--PLVVGPHITSTKLYLRLLPPASSQEFFHITVNTSSMGLNAVPKGPIFGGVLRQSETSFIHVLYECQIKGVSNVSISIPLLPFESLHASWVKDCGGGSVKGLTIGTESWERGDVVNNGVTSTEWEKALHITSNDAEGIVPSVNSSVRFKDFWITNEG-NSVHIDPVLVTIERSDVVSAFTSATNERGAVSQVQNGGVLA--HNDLLRLRLRTICKKRGSSLIVVTIPVKSFRNVEFGLLKHCRAPRRYKHSGFLRTAESVVTLVTLFIAFS 500          
The following BLAST results are available for this feature:
BLAST of Gchil2152.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2F0_9FLOR3.130e-1824.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 465..479
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 443..464
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..442
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availableTMHMMTMhelixcoord: 442..464

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000228_piloncontigtig00000228_pilon:61441..62880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2152.t1Gchil2152.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000228_pilon 61441..62880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2152.t1 ID=Gchil2152.t1|Name=Gchil2152.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=480bp
MGKCPSWYLHSYKTALSILLAAAVHFKQALATQKANIFIDAQHRQDPLVQ
AVTLTTFNVLHLTPFKPQTVFHKGYLLSKWKSCSQQAKPKACITLPIHQD
RIAFLYTYKKERHAEYRLKSPQVSSRTNRSDSSVTTYRHAFGKAWFTLLF
RCRRNTIQQWNEVFDLTVPITDHYSIQTTLIKRCASGVSHPFLQVGFIQN
DQLRLWDHNELDAIRVSASTAVTPLIIRLKNPAWALQHGKPSMKTTKQLL
SISTRGVSSNGTFLQGDNKMWLLYTCHQSGVASAYLKIDLGPWKALTMHF
NKSCGGSVANGLNIGTTRKFKDVIDNGITQPSFVLTPGNETSLQTLPASK
RSLTVSVSNNGLDTLNMGRAHITLHNASVLEVRIRNWDTMALYHGHRRPL
RLETKCKRNGTAVIQVSIPVLQHQAAEFWVRKLCAPLGKERTMVTTAAML
TVGVVVSLSAQRIWRKREVRGYRLVPLSS*
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