Gchil2063.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil2063.t1
Unique Name	Gchil2063.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	442

Homology

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BLAST of Gchil2063.t1 vs. uniprot
Match: A0A2V3IWN9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWN9_9FLOR)

HSP 1 Score: 362 bits (928), Expect = 9.610e-120
Identity = 170/348 (48.85%), Postives = 249/348 (71.55%), Query Frame = 0

Query:   92 LCKAEDTSPNSKRPTWGTCLAFILSQRHDMLLYFSPSRIWPDKVFKMPDSCYSRHIWLGVQPSATDTNDLGVRVSHFRKFSWFGRNCEEQMPCLGGLGPLPESLQMSALSNIVSAVQAFLEIEFIPQDAVNILVYDRSDTFRRRWNGAKDVYDKLKFDTRINVQLIHRMPGSFSKQVRLFAWANIVLAPHGGAMANTIFMQSGGDILEMRRNCEADTRFANFMPWDWTGWHAHLLGLNLIYIGCTTEKQKTEIPN-GIEQDKTKFTVNVTEVLRVIEGCIRRQIHRRDVAKRSRSLSEKSSEDEDEEMLYLVHKEFQNITMIEFLFLVSITSVIIIGSKLCSRRRQIT 438
            +C  +    + +RP WG CLAFIL+Q H   L+F  +RIWP +V   P +C+S+ IW+G+ P++  + D GVRVSHFRK SWFGRNCE Q PC+ GL  LP+S Q SALSNIVSAV  + E+++   D +N+L+YDR+DT RR+W GA++V++KL  D R++V+L+H+MP SF KQV+LFAWA+I L+PHG A+ANTIFMQS  D+LE+ +NC+AD++ A F PWDWTGWHAHLLGLNL+Y+ CTT +Q + + + G+    ++FTVNV++VL V+E C++RQ+HRR      +      +       L  V +E + +++ EFL L+ +++V+++G++  S R++ T
Sbjct:    1 MCGEDADYASPQRPPWGICLAFILAQWHSAQLHFEKTRIWPHQV-TAPGACHSKQIWMGILPASALSRDTGVRVSHFRKLSWFGRNCEVQYPCVSGLAHLPDSWQTSALSNIVSAVLDYTEVKYARSDVINVLIYDRNDTRRRKWMGAQEVFEKLGSDKRLHVKLLHQMPMSFFKQVKLFAWADIFLSPHGAAIANTIFMQSESDVLEIMKNCDADSKQARFAPWDWTGWHAHLLGLNLVYLECTTLQQASAVTSDGV----SRFTVNVSDVLTVVEHCVQRQLHRRKAKSVGQIAGIAPNPSSKGSNLIEVQQELRRLSVEEFLMLLMLSAVVVLGTRTASARKRRT 343

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BLAST of Gchil2063.t1 vs. uniprot
Match: A0A1X6P8T0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8T0_PORUM)

HSP 1 Score: 80.9 bits (198), Expect = 1.430e-12
Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 0

Query:  221 VNILVYDRSDTFRRRWNGAKDVYDKLKFDTRINVQLIHRM-PGSFSKQVRLFAWANIVLAPHGGAMANTIFMQSGGDILEMRRNC-EADTRFANFMPWDWTGWHAHLLGLNLIYIGC 335
            V +L+Y R D   R+W     +   L+ +  + V ++HR+ P SF+ Q   FA A++++APHG A AN +F+   G ++E+ R C +A        P  W+G  A  LGL+LIY+ C
Sbjct:  647 VRVLLYTRGDMTSRQWLSTGSLVAALRAERAVTVDVVHRLVPSSFAAQAATFAAADVLVAPHGAAAANALFLPPDGAVVEVWRCCWDAGVARRPTAPRPWSGALAAALGLDLIYVPC 763

The following BLAST results are available for this feature:

BLAST of Gchil2063.t1 vs. uniprot

BLAST of Gchil2063.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IWN9_9FLOR	9.610e-120	48.85	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A1X6P8T0_PORUM	1.430e-12	35.90	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007657	Glycosyltransferase 61	PFAM	PF04577	Glyco_transf_61	coord: 211..297 e-value: 2.0E-11 score: 44.1
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 24..410
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 411..431
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..23
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 432..441
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..18
None	No IPR available	TMHMM	TMhelix		coord: 409..431

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000019_pilon	contig	tig00000019_pilon:370465..371790 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2063.t1	Gchil2063.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000019_pilon 370465..371790 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil2063.t1 ID=Gchil2063.t1|Name=Gchil2063.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=442bp
MQIQRLVFVITFAGSLAFDFCHSDPRIQVYEDRPQSTSSQSCPTAIYLPV
LDRNPNHALHDRLWALSHYLQHCTDTRSTLVLNDHLLYNLSLCKAEDTSP
NSKRPTWGTCLAFILSQRHDMLLYFSPSRIWPDKVFKMPDSCYSRHIWLG
VQPSATDTNDLGVRVSHFRKFSWFGRNCEEQMPCLGGLGPLPESLQMSAL
SNIVSAVQAFLEIEFIPQDAVNILVYDRSDTFRRRWNGAKDVYDKLKFDT
RINVQLIHRMPGSFSKQVRLFAWANIVLAPHGGAMANTIFMQSGGDILEM
RRNCEADTRFANFMPWDWTGWHAHLLGLNLIYIGCTTEKQKTEIPNGIEQ
DKTKFTVNVTEVLRVIEGCIRRQIHRRDVAKRSRSLSEKSSEDEDEEMLY
LVHKEFQNITMIEFLFLVSITSVIIIGSKLCSRRRQITRRT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007657	Glycosyltransferase_61