Gchil2006.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2006.t1
Unique NameGchil2006.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length219
Homology
BLAST of Gchil2006.t1 vs. uniprot
Match: A0A2V3ILF4_9FLOR (Protein disulfide-isomerase tigA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILF4_9FLOR)

HSP 1 Score: 262 bits (670), Expect = 4.350e-86
Identity = 138/214 (64.49%), Postives = 162/214 (75.70%), Query Frame = 0
Query:    7 LTAIVLLLCVAVAAHEPA--AAVLELSFLSLDHLIKSSSKPLLLQFYSPTCGHCVRFEPAYERIARQLHMDANVARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSVEELIKFTQSNGTTSGEKVTAINGPLNPYWQLVHLLFRFVNFLQVEFKQYCRNGGNIPLLVFAVVTGVMCAFVVAIYLITLPPKPYPSRNQWPVPTHAHHD 218
            L  +V  LC  VAAH P   +AVLELS L LDH++ +++KPLLLQFYSPTC HCVRF PAYE++A  L  DA VARVDG+ HRALRLRF VMAFPSFFLIHAGSVFEFVGS S E+L+ F +S+G  SG+K++++ GPL+PYW+LVHLLFRFV FLQ     Y RNGGN+  LV AVV GV+ AFVV I+LIT PPKPYP R      T  HHD
Sbjct:    5 LALLVACLCSVVAAHPPQHHSAVLELSHLQLDHIVSTATKPLLLQFYSPTCIHCVRFAPAYEQLASDLTSDAFVARVDGINHRALRLRFHVMAFPSFFLIHAGSVFEFVGSASSEQLLNFVRSHGAISGKKLSSLAGPLSPYWKLVHLLFRFVYFLQRHVHMYQRNGGNMAFLVLAVVIGVLSAFVVIIHLITRPPKPYPQR------TRLHHD 212          
BLAST of Gchil2006.t1 vs. uniprot
Match: A0A7S2A7M5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7M5_TRICV)

HSP 1 Score: 96.3 bits (238), Expect = 1.880e-20
Identity = 52/138 (37.68%), Postives = 78/138 (56.52%), Query Frame = 0
Query:   27 VLELSFLSLDHLIKSSSKPLLLQFYSPTCGHCVRFEPAYERIARQLHM---------------DANVARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSVEELIKFTQSNGTTSGEKVTAINGPLNPYWQL 149
            V+EL+ ++ D  ++  +   L++FY+P CGHC RF P YE +AR+LH                D NVA+VDG + RAL  RF V  FPSF+L+    V+E+ G R++++++ F +  G    E V  +N P  P  QL
Sbjct:   83 VIELTAMNFDSSVRDGNV-WLVEFYAPWCGHCKRFAPTYEEVARKLHSLHKKPGYDVYDDGFKDVNVAKVDGSSDRALSSRFGVKGFPSFYLVDGWYVYEYDGRRNLDDMVSFARG-GYEDQEPVPFLNSPFGPMGQL 218          
BLAST of Gchil2006.t1 vs. uniprot
Match: A0A7S4JUI7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JUI7_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.410e-20
Identity = 52/141 (36.88%), Postives = 80/141 (56.74%), Query Frame = 0
Query:   20 AHEPAAAVLELSFLSLDHLIKSSSKPLLLQFYSPTCGHCVRFEPAYERIARQLHMD-----------ANVARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSVEELIKFTQSNGTTSGEKVTAINGPLNPYWQL 149
            A  P A V+EL+  + D  +K  S   L++FY+P CGHC RF P YE +A++LH               VA+VDG A RAL  RF V AFP+F+L+    V+++ G R++++L+ F + +   + E +  +N P  P  Q+
Sbjct:   40 ASPPPAKVIELNARNFDLSMKDGSV-WLVEFYAPWCGHCKRFAPTYEEVAKRLHTSPPGEGRPDGRRVMVAKVDGAADRALAARFSVHAFPTFYLVDGWDVYQYEGRRTLDDLVDFAEKD-YANHEPIPFLNSPFGPMGQV 178          
BLAST of Gchil2006.t1 vs. uniprot
Match: A0A7S2S4S3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S4S3_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.830e-18
Identity = 63/186 (33.87%), Postives = 92/186 (49.46%), Query Frame = 0
Query:   27 VLELSFLSLDHLIKSSSKPLLLQFYSPTCGHCVRFEPAYERIARQLHMDAN-------VARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSVEELIKFTQSNGTTSGEKVTAINGPLNPYWQLVHLLFRFVNFLQVEF------KQYCRNGGNIPLLVFAVVTGVMCAFVVAIYLITLP 199
            V++L   S D  I+  +   L++FY+P CGHC RF P YE +A+QLH + +       VA+VDG   RAL  RF V  FP+F+LI   +V E+ G R+ + L +F         E +  +N P  P  Q   LL R V    +++      + Y      I L  F +V G+    V+    +TLP
Sbjct:   33 VVDLDARSFDSSIRDGNA-WLIEFYAPWCGHCTRFAPTYEAVAKQLHENQSTSERKVMVAKVDGGGDRALASRFNVRGFPTFYLIDGWTVREYTGKRTQDALFQFATKT-YEEYEPIPFLNSPFGPMGQSRALLMR-VGTKTIDYHASMVKRGYPSIFAAITLAAFGIVFGLTAILVIG--FMTLP 213          
BLAST of Gchil2006.t1 vs. uniprot
Match: A0A6J1CIG7_MOMCH (Protein disulfide-isomerase n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1CIG7_MOMCH)

HSP 1 Score: 70.5 bits (171), Expect = 1.440e-10
Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 0
Query:   34 SLDHLIKSSSKPLLLQFYSPTCGHCVRFEPAYERIARQLHMDANV--ARVDGVAHRALRLRFRVMAFPSFFLIHA-GSVFEFVGSRSVEELIKFTQSNGTTSGE 134
            SL  ++  S K +LL+FYSP CGHC +  P YE +      D +V  A+ D  A+      F +  +P+ FL  A G + E+ G RS E++I F ++N    GE
Sbjct:  384 SLHDVVYKSGKNVLLEFYSPWCGHCKKLAPTYEEVGVSYEKDPDVIIAKFDAAANDIPESDFDIQGYPTVFLRTASGKLVEYSGDRSKEDIINFVETNRDKIGE 487          
BLAST of Gchil2006.t1 vs. uniprot
Match: U6JVK8_9EIME (Thioredoxin, putative n=1 Tax=Eimeria mitis TaxID=44415 RepID=U6JVK8_9EIME)

HSP 1 Score: 68.9 bits (167), Expect = 1.530e-10
Identity = 43/153 (28.10%), Postives = 72/153 (47.06%), Query Frame = 0
Query:   41 SSSKPLLLQFYSPTCGHCVRFEPAYERIARQLHMDANVARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSVEELIKFTQSNGT-TSGEKVTAINGPLNPY--------WQLVHLLFRFVNFLQVEFKQYCRNGGNIPLLVFAVVTG 184
            S++    ++FY+P CGHC +  PA+E +A++L    NVA +D   +     RF +  FP+      G ++++ GSR+V++L  F       T G+ +  +   L+           QL  +  +F   L + F   C  G  I  L  A+ TG
Sbjct:   77 STTGDWFVKFYAPWCGHCRKMAPAWEELAKKLKGQINVAHLDATTNPQTARRFSIRGFPTLLYFKNGQMYQYKGSRTVDDLYAFATGGWEKTPGKPIPPVLSWLDTMKDEFMLAIQQLRDVFIQFPVPLLILFSVGCIMGSMITCLGVALCTG 229          
BLAST of Gchil2006.t1 vs. uniprot
Match: UPI001E4A3BFC (thioredoxin domain-containing protein n=1 Tax=Pseudodesulfovibrio sp. SF6 TaxID=2810563 RepID=UPI001E4A3BFC)

HSP 1 Score: 66.6 bits (161), Expect = 1.980e-10
Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 0
Query:   29 ELSFLSLDHLIKSSSKPLLLQFYSPTCGHCVRFEPAYERIARQLHMDANVARVDGVAHRALRLRFRVMAFPSFFLIHAG-SVFEFVGSRSVEELIKFTQSNGT 130
            EL   + D  I  +  P+L+ FYSPTCG C+   P ++  A+ LH  A +A++D  A +A+  RF VMA P+  L   G  +    G+ S  +++ + +S  T
Sbjct:   43 ELVGTTFDRHIAKNKLPVLVDFYSPTCGPCLMMGPQFDEAAKTLHPQARLAKIDTSAEQAIASRFNVMAVPTLILFSNGREIARQPGAMSSGDIVNWVRSKIT 145          
BLAST of Gchil2006.t1 vs. uniprot
Match: A0A078F495_BRANA (Protein disulfide-isomerase n=9 Tax=Brassica TaxID=3705 RepID=A0A078F495_BRANA)

HSP 1 Score: 69.7 bits (169), Expect = 2.630e-10
Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 0
Query:   34 SLDHLIKSSSKPLLLQFYSPTCGHCVRFEPAYERIARQLHMDANV--ARVDGVAHRALRLRFRVMAFPSFFLIHA-GSVFEFVGSRSVEELIKFTQSNGTTSGEKVT 137
            SLD ++ SS K +LL+FY+P CGHC    P  + +A     D +V  A+ D  A+      F V  FP+ +L  A G+V  + G R+ E++I F   N  T+GE  T
Sbjct:  380 SLDEMVFSSGKNVLLEFYAPWCGHCQNLVPILDEVAVSYQSDPSVVIAKFDATANDFPHDTFDVKGFPTIYLRSANGNVVLYKGDRTKEDIISFIDKNKDTAGETKT 486          
BLAST of Gchil2006.t1 vs. uniprot
Match: A0A6L9LYR4_9DELT (Thioredoxin TrxC n=1 Tax=Pseudodesulfovibrio sp. JC047 TaxID=2683199 RepID=A0A6L9LYR4_9DELT)

HSP 1 Score: 66.2 bits (160), Expect = 2.700e-10
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 0
Query:   28 LELSFLSLDHLIKSSSKPLLLQFYSPTCGHCVRFEPAYERIARQLHMDANVARVDGVAHRALRLRFRVMAFPSFFLIHAG 107
            LEL   + D  I  +S P+L+ FYSPTCG C+   P +E  A+QLH    +A++D  A +A+  RF + A P+  L   G
Sbjct:   42 LELVGTTFDRHIAKTSVPVLVDFYSPTCGPCLMMGPQFEDAAKQLHPKVRLAKLDTAADQAIAARFGIQAVPTLILFKDG 121          
BLAST of Gchil2006.t1 vs. uniprot
Match: A0A022Q0D4_ERYGU (Protein disulfide-isomerase n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022Q0D4_ERYGU)

HSP 1 Score: 68.9 bits (167), Expect = 4.850e-10
Identity = 36/104 (34.62%), Postives = 59/104 (56.73%), Query Frame = 0
Query:   34 SLDHLIKSSSKPLLLQFYSPTCGHCVRFEPAYERIARQLHMDANV--ARVDGVAHRALRLRFRVMAFPS-FFLIHAGSVFEFVGSRSVEELIKFTQSNGTTSGE 134
            SL  ++ +S K +LL+FY+P CGHC +  P  + +A     D NV  A+ D  A+   +  F V  FP+ +F    GS+ ++ G R+ E++IKF ++N   + E
Sbjct:  380 SLQDVVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAISFESDPNVVIAKFDATANDVPKGDFEVQGFPTIYFRSSTGSLSQYEGDRTKEDIIKFIETNRDKTAE 483          
The following BLAST results are available for this feature:
BLAST of Gchil2006.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILF4_9FLOR4.350e-8664.49Protein disulfide-isomerase tigA n=1 Tax=Gracilari... [more]
A0A7S2A7M5_TRICV1.880e-2037.68Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4JUI7_9STRA2.410e-2036.88Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2S4S3_9STRA1.830e-1833.87Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A6J1CIG7_MOMCH1.440e-1036.54Protein disulfide-isomerase n=1 Tax=Momordica char... [more]
U6JVK8_9EIME1.530e-1028.10Thioredoxin, putative n=1 Tax=Eimeria mitis TaxID=... [more]
UPI001E4A3BFC1.980e-1033.98thioredoxin domain-containing protein n=1 Tax=Pseu... [more]
A0A078F495_BRANA2.630e-1037.38Protein disulfide-isomerase n=9 Tax=Brassica TaxID... [more]
A0A6L9LYR4_9DELT2.700e-1040.00Thioredoxin TrxC n=1 Tax=Pseudodesulfovibrio sp. J... [more]
A0A022Q0D4_ERYGU4.850e-1034.62Protein disulfide-isomerase n=1 Tax=Erythranthe gu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 19..138
e-value: 1.8E-23
score: 84.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 197..218
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 174..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..173
NoneNo IPR availableCDDcd02961PDI_a_familycoord: 28..124
e-value: 2.75406E-23
score: 88.0513
NoneNo IPR availableTMHMMTMhelixcoord: 174..196
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 35..125
e-value: 3.8E-16
score: 59.0
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 16..130
score: 10.867056
IPR044569Protein disulfide-isomerase A6-likePANTHERPTHR45815PROTEIN DISULFIDE-ISOMERASE A6coord: 2..128
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 47..65
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 20..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004439_piloncontigtig00004439_pilon:1686904..1687690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2006.t1Gchil2006.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004439_pilon 1686904..1687690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2006.t1 ID=Gchil2006.t1|Name=Gchil2006.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=219bp
MARYAYLTAIVLLLCVAVAAHEPAAAVLELSFLSLDHLIKSSSKPLLLQF
YSPTCGHCVRFEPAYERIARQLHMDANVARVDGVAHRALRLRFRVMAFPS
FFLIHAGSVFEFVGSRSVEELIKFTQSNGTTSGEKVTAINGPLNPYWQLV
HLLFRFVNFLQVEFKQYCRNGGNIPLLVFAVVTGVMCAFVVAIYLITLPP
KPYPSRNQWPVPTHAHHD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR044569PDIA6-like
IPR017937Thioredoxin_CS
IPR036249Thioredoxin-like_sf