Gchil2004.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2004.t1
Unique NameGchil2004.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length483
Homology
BLAST of Gchil2004.t1 vs. uniprot
Match: A0A2V3ILG6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG6_9FLOR)

HSP 1 Score: 252 bits (643), Expect = 3.370e-74
Identity = 162/479 (33.82%), Postives = 254/479 (53.03%), Query Frame = 0
Query:    1 MRLSNWRWFGPIPAAFVLQAVFGLQFANGVFASFLDDPVLTQALGLAALFVSLGITAFGVLLYYASDHSKYHA--VPRVVAVFGSFAVAAQLFVSYGLINHSRFIVYVASILQGTGAGCIYVVSIVVVQDWVPESPALVTGLSLLFGGAGSLFGIYAFQALVHTMGGAIPAMAVASLAAGLVSVTASMFIERPPDRWCPVAEIF--DPDTTMTLKDAHDARRVKPVDEQSACYSSIVDFGDDDLLHRKQKKCEAVNRLSCYDIMIDPAFALVFVSVFVAAGPGYGFVLSYPLMLHSLFNLSLIDANQMLCYATFFGVVGRLALGVAIDMLSSSSFSSSNGEQAPNIRGSKVTNIFILLLQTGGLALMPVAIRTKCAWLFHVAVFAVFVAFNGGAVVAACLARDVFAPENSTLAFALLGVAVGVARALFSIVLAACDGNSG-------------VGAYDWYIGWSIVVSVVGVAGSYLIE 462
            + L ++R+  P+PA F+LQA+FGL +A GVF + +  P  T A+GLA+ FVS+GIT  GV +   +  S  HA   P   A+ GS  ++ Q  ++  L   +  ++Y AS+L GTG GCIYV S+ V+Q WVPES   +TG+ +L G AGSLFGIY ++ALV  +G  IPAMA     +  +S  A+  +++PP  W P  ++     +    L   H A+R       SA + +++                     S  DI+ D +F ++ V+     GPG+G VL+Y  ML  +F  ++ +AN +  + TF G+ GRL  G+ +D L S   S      AP + G K TN+ +LL+Q    A +P  IR    + F  A   +++ F+GG VVAACL   VF   N++LAF+L+ +++G     FS V+A C  ++                 Y+ ++  +++ S+ G+  ++ I 
Sbjct:    7 LLLRDYRYVVPVPACFLLQALFGLLYAQGVFVALVHTPQYTLAIGLASFFVSVGITLSGVSMSKLASSSPSHAQSAPVYAALAGSVGLSGQTVLALALALDNVHLLYAASVLYGTGCGCIYVASVDVLQAWVPESRGFITGVGMLCGAAGSLFGIYIYRALVAALGAPIPAMAFVGAVSAALSFAAAPMLKKPPAGWHPARDLRAGGDEENAPLLITHAAQRALH-SPPSAPHPAVI---------------------SVRDILRDRSFYMLVVAFAATVGPGFGLVLAYQTMLIDMFGAAISEANNLFFWITFSGLAGRLLAGIGVDALESDVGS------APRLTGGKRTNMLLLLVQIAATASLPFFIRANMLYAFTAACALIYITFSGGPVVAACLVGAVFDQVNASLAFSLVAISIGAGDMFFSWVVAMCSESTAYPRVLHDRLPRFHASDYNLFLWCTVIWSLAGLVATHFIS 457          
The following BLAST results are available for this feature:
BLAST of Gchil2004.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILG6_9FLOR3.370e-7433.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 219..459
e-value: 8.4E-7
score: 30.0
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 2..197
e-value: 9.3E-7
score: 30.4
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 38..462
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 42..424
e-value: 6.6E-18
score: 64.7
NoneNo IPR availablePANTHERPTHR11360MONOCARBOXYLATE TRANSPORTERcoord: 6..429
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 327..346
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..284
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 347..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 462..482
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 408..430
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 373..396
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..188
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 161..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 368..372
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 431..441
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..263
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 442..461
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 304..326
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 397..407
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 285..303
NoneNo IPR availableTMHMMTMhelixcoord: 301..323
NoneNo IPR availableTMHMMTMhelixcoord: 372..394
NoneNo IPR availableTMHMMTMhelixcoord: 439..461
NoneNo IPR availableTMHMMTMhelixcoord: 407..429
NoneNo IPR availableTMHMMTMhelixcoord: 350..367
NoneNo IPR availableTMHMMTMhelixcoord: 103..125
NoneNo IPR availableTMHMMTMhelixcoord: 166..188
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 264..286
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004439_piloncontigtig00004439_pilon:1677806..1679254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2004.t1Gchil2004.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004439_pilon 1677806..1679254 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2004.t1 ID=Gchil2004.t1|Name=Gchil2004.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=483bp
MRLSNWRWFGPIPAAFVLQAVFGLQFANGVFASFLDDPVLTQALGLAALF
VSLGITAFGVLLYYASDHSKYHAVPRVVAVFGSFAVAAQLFVSYGLINHS
RFIVYVASILQGTGAGCIYVVSIVVVQDWVPESPALVTGLSLLFGGAGSL
FGIYAFQALVHTMGGAIPAMAVASLAAGLVSVTASMFIERPPDRWCPVAE
IFDPDTTMTLKDAHDARRVKPVDEQSACYSSIVDFGDDDLLHRKQKKCEA
VNRLSCYDIMIDPAFALVFVSVFVAAGPGYGFVLSYPLMLHSLFNLSLID
ANQMLCYATFFGVVGRLALGVAIDMLSSSSFSSSNGEQAPNIRGSKVTNI
FILLLQTGGLALMPVAIRTKCAWLFHVAVFAVFVAFNGGAVVAACLARDV
FAPENSTLAFALLGVAVGVARALFSIVLAACDGNSGVGAYDWYIGWSIVV
SVVGVAGSYLIEPAKCVNFDGANNRVFADMQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR011701MFS