Gchil1987.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1987.t1
Unique NameGchil1987.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length361
Homology
BLAST of Gchil1987.t1 vs. uniprot
Match: A0A0M3KHL2_ANISI (Ribonuclease P protein subunit p20 n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A0M3KHL2_ANISI)

HSP 1 Score: 61.2 bits (147), Expect = 4.670e-8
Identity = 33/82 (40.24%), Postives = 54/82 (65.85%), Query Frame = 0
Query:  110 ANRVTSLLQAHPAPVVLHAMGAAITKCCHLALAVQRNNANAVSIELTTSTQVVYDDYHPLTEGSEETTVSRNVSALHITLRR 191
            +NRV  +L +    VVLH +GAA+++  +LAL +QR  +N+V + + TST  V DD  PL +  + T+ +R++SA+HI + R
Sbjct:   37 SNRVQKILDSELDEVVLHGIGAAVSRTLNLALQIQRKLSNSVQLHIRTSTVKVTDDLFPLYDEVDFTSRNRSISAIHIRISR 118          
BLAST of Gchil1987.t1 vs. uniprot
Match: A0A6J0BGM0_NEOLC (ribonuclease P protein subunit p20 n=5 Tax=Diprioninae TaxID=410274 RepID=A0A6J0BGM0_NEOLC)

HSP 1 Score: 61.6 bits (148), Expect = 6.480e-8
Identity = 30/85 (35.29%), Postives = 53/85 (62.35%), Query Frame = 0
Query:  111 NRVTSLLQAHPAPVVLHAMGAAITKCCHLALAVQRNNANAVSIELTTSTQVVYDDYHPLTEGSEETTVSRNVSALHITLRRTKHF 195
            N+   LL +    +V+HA+GAA+++ C+LAL ++ N+   V +++ TST  + DD+ P+T+ ++     R  SA+HI + RT  F
Sbjct:   63 NKCEKLLDSGEQEIVIHALGAAVSRACNLALQLKENHHGTVDLDINTSTVDITDDFEPITDDADYEVNQRQNSAIHIRVFRTALF 147          
BLAST of Gchil1987.t1 vs. uniprot
Match: A0A0N4VEX4_ENTVE (Ribonuclease P protein subunit p20 n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4VEX4_ENTVE)

HSP 1 Score: 57.4 bits (137), Expect = 1.300e-6
Identity = 32/83 (38.55%), Postives = 52/83 (62.65%), Query Frame = 0
Query:  112 RVTSLLQAHPAPVVLHAMGAAITKCCHLALAVQRNNANAVSIELTTSTQVVYDDYHPLTEGSEETTVSRNVSALHITLRRTKH 194
            R+  LL      VVLH +GAA+++  +LAL +QR  A+ V +++ TS+ +V DD  PL +  +  T +R++SA+HI + R  H
Sbjct:   48 RIQKLLDEKFDEVVLHGLGAAVSRTINLALQLQRRLADTVKLDVRTSSVMVTDDLFPLYDEVDFATRNRSISAVHILISRRTH 130          
BLAST of Gchil1987.t1 vs. uniprot
Match: UPI0006263B91 (ribonuclease P protein subunit p20 n=1 Tax=Orussus abietinus TaxID=222816 RepID=UPI0006263B91)

HSP 1 Score: 57.4 bits (137), Expect = 1.960e-6
Identity = 27/81 (33.33%), Postives = 50/81 (61.73%), Query Frame = 0
Query:  111 NRVTSLLQAHPAPVVLHAMGAAITKCCHLALAVQRNNANAVSIELTTSTQVVYDDYHPLTEGSEETTVSRNVSALHITLRR 191
            ++   LL A  + +++H +G A+ + CHLAL ++ N+   V I++ TST  + D++ PLT+  +    +R+ SA+HI + R
Sbjct:   60 SKCEKLLDAGESEIIIHGLGTAVNRACHLALQLKENHHGTVDIDVNTSTVELIDEFEPLTDDVDYEVNNRHSSAIHIRVFR 140          
BLAST of Gchil1987.t1 vs. uniprot
Match: UPI00084087D3 (ribonuclease P protein subunit p20 n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI00084087D3)

HSP 1 Score: 56.6 bits (135), Expect = 4.230e-6
Identity = 26/72 (36.11%), Postives = 47/72 (65.28%), Query Frame = 0
Query:  116 LLQAHPAPVVLHAMGAAITKCCHLALAVQRNNANAVSIELTTSTQVVYDDYHPLTEGSEETTVSRNVSALHI 187
            LL    + V++H +GAA+T+ C+LAL ++  +   + +++ TST  + DD+ PL +  +  T++RN SA+HI
Sbjct:   69 LLNNGMSEVIIHGLGAAVTRACNLALQLREAHYGGIELDIKTSTVSIIDDFEPLNDNLDYETINRNNSAVHI 140          
The following BLAST results are available for this feature:
BLAST of Gchil1987.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0M3KHL2_ANISI4.670e-840.24Ribonuclease P protein subunit p20 n=1 Tax=Anisaki... [more]
A0A6J0BGM0_NEOLC6.480e-835.29ribonuclease P protein subunit p20 n=5 Tax=Diprion... [more]
A0A0N4VEX4_ENTVE1.300e-638.55Ribonuclease P protein subunit p20 n=1 Tax=Enterob... [more]
UPI0006263B911.960e-633.33ribonuclease P protein subunit p20 n=1 Tax=Orussus... [more]
UPI00084087D34.230e-636.11ribonuclease P protein subunit p20 n=1 Tax=Ceratin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014612Ribonucleases P/MRP protein subunit Rpp20/Pop7PFAMPF12328Rpp20coord: 74..187
e-value: 6.4E-6
score: 26.2
IPR036882Alba-like domain superfamilyGENE3D3.30.110.20coord: 75..189
e-value: 7.3E-13
score: 50.4
IPR036882Alba-like domain superfamilySUPERFAMILY82704AlbA-likecoord: 112..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004439_piloncontigtig00004439_pilon:1569051..1571111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1987.t1Gchil1987.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004439_pilon 1569051..1571111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1987.t1 ID=Gchil1987.t1|Name=Gchil1987.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=361bp
MDPNKSAPEYGAEQSPYAGMPSYIPHDPKARPNVYPRPAVDPEKIAIIPA
ANKPAQQPLDYSKYFRGESVQQQRRIRDNMAAQASASAAAAAAAASTAAA
ASAAAAASAANRVTSLLQAHPAPVVLHAMGAAITKCCHLALAVQRNNANA
VSIELTTSTQVVYDDYHPLTEGSEETTVSRNVSALHITLRRTKHFVSIAS
PHHNAAPEMSTWTPAAAPKLMYHSWVPPVDVDVPPDLRSVAALEAALQQR
RDQAKNLRVPNPMGLCIAAPAAAAAVSADDQLRDRASHVPNDDRMEDVDS
DAMSASDFDNMSHASLAEDPAVGADAHAHAQQHHSQLHADGDDDEEEDDD
DDDDDLARFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014612Pop7/Rpp20
IPR036882Alba-like_dom_sf