Gchil1985.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1985.t1
Unique NameGchil1985.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length79
Homology
BLAST of Gchil1985.t1 vs. uniprot
Match: A0A2V3IFY9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFY9_9FLOR)

HSP 1 Score: 138 bits (347), Expect = 3.320e-41
Identity = 61/76 (80.26%), Postives = 68/76 (89.47%), Query Frame = 0
Query:    3 GGASQKYPVPGEPYGGFKPTPPARWHSRLGYAFGVTMWLWVFYRAKQDLPHMLGFEKPWEHHHGDSHEHHDNESTH 78
            GG + +YPVPGEPYGGFKP PP RW SRLGYAFGVTMWLWVFYRAK DLPHMLGFEKPWEHHHG SH+ H++++TH
Sbjct:    2 GGETPRYPVPGEPYGGFKPIPPPRWQSRLGYAFGVTMWLWVFYRAKNDLPHMLGFEKPWEHHHG-SHDEHESDATH 76          
BLAST of Gchil1985.t1 vs. uniprot
Match: R7Q5C9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5C9_CHOCR)

HSP 1 Score: 110 bits (274), Expect = 4.680e-30
Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    3 GGASQKYPVPGEPYGGFKPTPPARWHSRLGYAFGVTMWLWVFYRAKQDLPHMLGFEKPWEHHHG---DSHE 70
            GG  +KYP PG+PYGGFKP PPA W SR+GY  GV+MWLW+FYR K+DLPH+LG++ PW+HH G   D HE
Sbjct:    2 GGPPEKYPQPGKPYGGFKPVPPAAWQSRVGYVMGVSMWLWIFYRGKKDLPHLLGWKHPWDHHGGHGGDGHE 72          
BLAST of Gchil1985.t1 vs. uniprot
Match: A0A1X6NLL5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLL5_PORUM)

HSP 1 Score: 84.0 bits (206), Expect = 9.990e-20
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0
Query:   14 EPYGGFKPTPPARWHSRLGYAFGVTMWLWVFYRAKQDLPHMLGFEKPWEHH-HGDSHE 70
             P+GG+ P    +W +R G A G  MWLW+FYRAK DLPHMLG+EKPW+HH HG  HE
Sbjct:   14 RPFGGWAPPAVPKWQTRTGTAMGAVMWLWIFYRAKNDLPHMLGWEKPWDHHAHGGDHE 71          
BLAST of Gchil1985.t1 vs. uniprot
Match: A0A167GNA3_CALVF (Uncharacterized protein n=2 Tax=Calocera TaxID=29888 RepID=A0A167GNA3_CALVF)

HSP 1 Score: 75.5 bits (184), Expect = 2.070e-16
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0
Query:   12 PGEPYGGFKPTPPARWHSRLGYAFGVTMWLWVFYRAKQDLPHMLGFEKPWEHHHGDSHEHH 72
            PG  Y GF P PP+R+H  L  A G +MW +VFYRA+QD P +LG+  PWE HH D H+ H
Sbjct:    6 PGTSYAGFHPHPPSRFHVYLAKALGASMWFFVFYRARQDGPRVLGWRHPWEGHHADGHDEH 66          
BLAST of Gchil1985.t1 vs. uniprot
Match: A0A8H7Q033_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q033_9FUNG)

HSP 1 Score: 65.1 bits (157), Expect = 1.980e-12
Identity = 29/56 (51.79%), Postives = 35/56 (62.50%), Query Frame = 0
Query:   18 GFKPTPPARWHSRLGYAFGVTMWLWVFYRAKQDLPHMLGFEKPWEHHHGDSH-EHH 72
            GF P     WH     A G +MW W+ YRAKQD+P +LG+  PW+ HHGD H EHH
Sbjct:    4 GFHPHLAGAWHRYGSKALGASMWFWMMYRAKQDMPVLLGWRHPWDGHHGDEHAEHH 59          
BLAST of Gchil1985.t1 vs. uniprot
Match: A0A7S2KLZ2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KLZ2_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.590e-12
Identity = 27/53 (50.94%), Postives = 34/53 (64.15%), Query Frame = 0
Query:   17 GGFKPTPPARWHSRLGYAFGVTMWLWVFYRAKQDLPHMLGFEKPWEHHHGDSH 69
            G   P   + WH++ G A G  MW+W+FYRAKQDLP +LG   PW+H  GD H
Sbjct:   30 GSHPPFTVSEWHTKGGEAIGFVMWMWIFYRAKQDLPVVLGLRHPWDHVEGDDH 82          
BLAST of Gchil1985.t1 vs. uniprot
Match: UPI001CC7D429 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 n=2 Tax=Proteaceae TaxID=4328 RepID=UPI001CC7D429)

HSP 1 Score: 63.9 bits (154), Expect = 8.180e-12
Identity = 32/60 (53.33%), Postives = 35/60 (58.33%), Query Frame = 0
Query:   16 YGGFKPTPPARWHSRLGYAFGVTMWLWVFYRAKQDLPHMLGFEKPWEHH--HGDSHEHHD 73
            Y GF    P RWH+  G      MW WVFYRAKQD P +LG+  PWE H  HG  HE HD
Sbjct:   14 YKGFTMHRPKRWHTVTGKGLCAIMWFWVFYRAKQDGPVVLGWRHPWEGHDSHGHGHESHD 73          
BLAST of Gchil1985.t1 vs. uniprot
Match: A0A7S3L8G8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L8G8_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 8.410e-12
Identity = 33/60 (55.00%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   12 PGEPYGGFKPTPPARWHSRLGYAFGVTMWLWVFYRAKQDLPHMLGFEKPWEHHHGDSHEH 71
            P    GG K    +  H+R G AFGV  WLWVF+RA+QDLP M GF  PWEH  GD H H
Sbjct:   26 PSRGMGGGKYLYVSETHTRWGEAFGVVTWLWVFHRARQDLPVMYGFRHPWEH--GDDHGH 83          
BLAST of Gchil1985.t1 vs. uniprot
Match: I1LPI3_SOYBN (Uncharacterized protein n=6 Tax=Fabaceae TaxID=3803 RepID=I1LPI3_SOYBN)

HSP 1 Score: 62.8 bits (151), Expect = 1.960e-11
Identity = 32/67 (47.76%), Postives = 35/67 (52.24%), Query Frame = 0
Query:    1 MGGGASQKYPVPGEPYGGFKPTPPARWHSRLGYAFGVTMWLWVFYRAKQDLPHMLGFEKPWEHHHGD 67
            MGGG        G  Y G     P RWH+  G      MW WVFYRAKQD P +LG+  PWE HH D
Sbjct:    1 MGGGQGH-----GTTYKGVTIHQPKRWHTITGKGLCAVMWFWVFYRAKQDGPVVLGWRHPWEGHHDD 62          
BLAST of Gchil1985.t1 vs. uniprot
Match: M9M208_PSEA3 (Uncharacterized protein n=2 Tax=Pseudozyma antarctica TaxID=84753 RepID=M9M208_PSEA3)

HSP 1 Score: 65.1 bits (157), Expect = 2.340e-11
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   14 EPYGGFKPTPPA---RWHSRLGYAFGVTMWLWVFYRAKQDLPHMLGFEKPWE---HHHGD 67
            +P  GF P PPA   RW ++L    G TMW W+FYRAKQD P +LG + PW+   HHHGD
Sbjct:  104 KPMPGFAPHPPAFKHRWGAKL---LGATMWFWIFYRAKQDGPVLLGLKHPWDGHDHHHGD 160          
The following BLAST results are available for this feature:
BLAST of Gchil1985.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFY9_9FLOR3.320e-4180.26Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5C9_CHOCR4.680e-3064.79Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NLL5_PORUM9.990e-2060.34Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A167GNA3_CALVF2.070e-1654.10Uncharacterized protein n=2 Tax=Calocera TaxID=298... [more]
A0A8H7Q033_9FUNG1.980e-1251.79Uncharacterized protein n=1 Tax=Umbelopsis vinacea... [more]
A0A7S2KLZ2_9STRA3.590e-1250.94Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
UPI001CC7D4298.180e-1253.33NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A7S3L8G8_9STRA8.410e-1255.00Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
I1LPI3_SOYBN1.960e-1147.76Uncharacterized protein n=6 Tax=Fabaceae TaxID=380... [more]
M9M208_PSEA32.340e-1153.33Uncharacterized protein n=2 Tax=Pseudozyma antarct... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..78
NoneNo IPR availableTMHMMTMhelixcoord: 27..44
IPR044980NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, plant/fungiPANTHERPTHR36987NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 2-LIKEcoord: 12..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004439_piloncontigtig00004439_pilon:1565327..1565663 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1985.t1Gchil1985.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004439_pilon 1565327..1565663 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1985.t1 ID=Gchil1985.t1|Name=Gchil1985.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=79bp
MGGGASQKYPVPGEPYGGFKPTPPARWHSRLGYAFGVTMWLWVFYRAKQD
LPHMLGFEKPWEHHHGDSHEHHDNESTH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044980NDUFB2_plant/fungi