Gchil1984.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1984.t1
Unique NameGchil1984.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length260
Homology
BLAST of Gchil1984.t1 vs. uniprot
Match: A0A5J6RLB9_GRALE (Phycocyanobilin lyase n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A5J6RLB9_GRALE)

HSP 1 Score: 349 bits (896), Expect = 2.870e-119
Identity = 157/212 (74.06%), Postives = 180/212 (84.91%), Query Frame = 0
Query:   40 TPGTGINARRLAKWLAADWSNKSQAMDNPQFWAHIHVCFRPLPWQFLHGYSLYCESAYDFNLGAPYKTSVVRIENDGKGQLELASYKIKQAEEFWMGAYEPQLLQSLTSDLLMRLPDACNTLYEWDEQKGVYMASSRPGKGCRIRRGGTERETYLDSQIMLSEDCYAAWDVGRDPQSDERVWGTPAGPFVFYVVSRLDHLVPDEQSALVVGP 251
            TP TG NARRLAKWLAADW+N+ QAM++PQFWAH+HVCFRPL W FL GYS YCESAYD+NLGAPYKTSVVRIENDG G LELASYKIKQ +E+WMGAYEPQLL+ LT+D L+RLP+ACNT + WDE K +Y ASSRPGKGCRI+R   E+ETYLDS+I L++  Y+AWDVGRDP++DE VWG  AGPF F VVSRLDHLVPDEQS  +  P
Sbjct:   34 TPATGTNARRLAKWLAADWANQPQAMEDPQFWAHVHVCFRPLRWHFLGGYSFYCESAYDYNLGAPYKTSVVRIENDGHGHLELASYKIKQPDEYWMGAYEPQLLEQLTTDQLLRLPEACNTAFVWDESKRMYTASSRPGKGCRIQRRAKEKETYLDSKITLTDHSYSAWDVGRDPETDELVWGAAAGPFDFQVVSRLDHLVPDEQSLAISAP 245          
BLAST of Gchil1984.t1 vs. uniprot
Match: R7Q5L5_CHOCR (Phycocyanobilin:Cys-153 beta-phycocyanin lyase, CpcT n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5L5_CHOCR)

HSP 1 Score: 321 bits (822), Expect = 5.540e-108
Identity = 142/220 (64.55%), Postives = 175/220 (79.55%), Query Frame = 0
Query:   32 ATTPPLSGTPGTGINARRLAKWLAADWSNKSQAMDNPQFWAHIHVCFRPLPWQFLHGYSLYCESAYDFNLGAPYKTSVVRIENDGKGQLELASYKIKQAEEFWMGAYEPQLLQSLTSDLLMRLPDACNTLYEWDEQKGVYMASSRPGKGCRIRRGGTERETYLDSQIMLSEDCYAAWDVGRDPQSDERVWGTPAGPFVFYVVSRLDHLVPDEQSALVVGP 251
            AT  P +GT  TG NARRLA+WLAADW NK Q+ +NP FWAHI VCFRPLPW  L  Y+LYCESAYDFNLGAPYK+SVV++ ++G G LEL SYK+K  EEFWM A+EP+LL+ LT+D L+++P+ACNT+YEW   K  Y A SRPGKGCRI RGG E+ETYLDS+IML+E  Y AWD+G DP++DERVWGT AGPFVF  ++ LD+LVP+E +++   P
Sbjct:   28 ATASPAAGTIATGANARRLARWLAADWDNKPQSYENPVFWAHIRVCFRPLPWSLLDSYTLYCESAYDFNLGAPYKSSVVQVVHNGAGHLELVSYKLKDPEEFWMAAHEPELLEPLTADQLLQMPEACNTVYEWSPAKNAYAAYSRPGKGCRICRGGKEKETYLDSKIMLTEAQYVAWDLGLDPETDERVWGTAAGPFVFSPLANLDYLVPEEPASVASSP 247          
BLAST of Gchil1984.t1 vs. uniprot
Match: A0A1X6NL70_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL70_PORUM)

HSP 1 Score: 238 bits (608), Expect = 3.720e-75
Identity = 114/209 (54.55%), Postives = 144/209 (68.90%), Query Frame = 0
Query:   46 NARRLAKWLAADWSNKSQAMDNPQFWAHIHVCFRPLPWQFLHGYSLYCESAYDFNLGAPYKTSVVRIENDGKGQ-LELASYKIKQAEEFWMGAYEPQLLQSLTSDLLMRLPDACNTLYEWDEQKGVYMASSRPGKGCRIRRGGTERETYLDSQIMLSEDCYAAWDVGRDPQSDERVWGTPAGPFVFYVVSRLDHLVPDEQSALVVGPEA 253
            +A    +W+AADWSNK+QA++NP FWAHIHV FRPLPW  L G S Y ESAYD+ LG PYKTSVV++     G+ LE  +YKIK+A+EFW+G +EP+LL  LT+D L+++P  CNT+Y WD  + VY A++RPGK C I R G    TYLDS  +LS + Y+ WD+GRDP++DERVWG  AGPF F    R    VP        GPEA
Sbjct:   74 DAVHFGRWIAADWSNKAQALENPPFWAHIHVVFRPLPWSLLDGISFYAESAYDYMLGNPYKTSVVKVVPTPDGRALEFENYKIKEADEFWLGGHEPELLDGLTADRLIKMPACCNTVYTWDPAERVYRAATRPGKECIIVRQGAT--TYLDSTAVLSAEGYSPWDLGRDPETDERVWGGAAGPFDFVPEKRFADDVP-------TGPEA 273          
BLAST of Gchil1984.t1 vs. uniprot
Match: M2YA83_GALSU (CpcT/CpeT protein family member n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2YA83_GALSU)

HSP 1 Score: 199 bits (507), Expect = 3.380e-60
Identity = 92/196 (46.94%), Postives = 132/196 (67.35%), Query Frame = 0
Query:   45 INARRLAKWLAADWSNKSQAMDNPQFWAHIHVCFRPLPWQFLHGYSLYCESAYDFNLGAPYKTSVVRIENDGKGQLELASYKIKQAEEFWMGAYEPQLLQSLTSDLLMRLPDACNTLYEWDEQKGVYMASSRPGKGCRIRRGGTERETYLDSQIMLSEDCYAAWDVGRDPQSDERVWGTPAGPFVFYVVSRLDHLV 240
            +   RLA++LAADWSN++QA++NP FW+H+ V +RPLP++ L G+SLY ES Y   L  PY+T V RI     G+LEL  YKI+  EEF+ G+   + L+SLT D L++LP+ CNT+  WDE K ++   + PGK C + R G  +ETYL + + +S++   +WD GR P++D+ +WG  AGPF FY V+R  H V
Sbjct:   56 VEEARLARFLAADWSNENQAIENPPFWSHMRVSYRPLPFELLEGFSLYSESCYQAFLKQPYRTGVYRILARNDGKLELELYKIEGEEEFYQGSRNIEKLRSLTRDRLVKLPNCCNTILSWDESKQMFSGETVPGKQCIVSRKG--KETYLHNSVTVSKEKLTSWDTGRCPKTDKLLWGAIAGPFEFYPVARFSHEV 249          
BLAST of Gchil1984.t1 vs. uniprot
Match: M1VHY4_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VHY4_CYAM1)

HSP 1 Score: 181 bits (458), Expect = 1.150e-52
Identity = 94/237 (39.66%), Postives = 139/237 (58.65%), Query Frame = 0
Query:   18 RARARAPLRRRPYCATTPPLSGTPGTGINARRLAKWLAADWSNKSQAMDNPQFWAHIHVCFRPLPWQFLHGYSLYCESAYDFNLGAPYKTSVVRIENDGKGQLELASYKIKQAEEFWMGAYEPQLLQSLT-------SDLLMRLPDACNTLYEWDEQKGVYMASSRPGKGCRIRRGGTERETYLDSQIMLSEDCYAAWDVGRDPQSDERVWGTPAGPFVFYVVSRLDHLVPDEQSAL 247
            RA +RA  RR    A+   L   P T  +   LA+WLA +W N  Q + NP FWAHI V +RPLPW+FL G++ Y ES Y +    PY+ ++++I  +  G LE  SYK++  E+F+  A++   L  L        ++  ++LP+ACN ++EW E + +Y   +RPG  C +RRG  +R++YLD+Q+ LSE    A D+GR PQ+ E++WG  AGPF F V       VP   +A+
Sbjct:   32 RAWSRASTRRAQCEASLVALK--PYTSYH---LARWLAKEWDNYDQHLANPPFWAHIRVSYRPLPWEFLEGHAFYVESIYTYAPKLPYRATIIKITRNSDGALETESYKVEGVEQFYTAAFDRSKLAELVRQAHPRHTNRCVKLPEACNAVFEWVEAEQLYRCKTRPGCKCMVRRG--DRDSYLDAQMTLSESRCTALDIGRCPQTHEQLWGAVAGPFDFVVRKSWSDEVPLPPAAM 261          
BLAST of Gchil1984.t1 vs. uniprot
Match: A0A5J4Z5S5_PORPP (Chromophore lyase CpcT/CpeT n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5S5_PORPP)

HSP 1 Score: 178 bits (451), Expect = 1.680e-51
Identity = 95/202 (47.03%), Postives = 117/202 (57.92%), Query Frame = 0
Query:   49 RLAKWLAADWSNKSQAMDNPQFWAHIHVCFRPLPWQFLHGY------SLYCESAYDFNLGAPYKTSVVRIENDGK--GQLELASYKIKQAEEF-WMGAYEPQLLQSLTSDLLMRLPDACNTLYEWDEQKGVYMASSRPGKGCRIRRGGTERETYLDSQIMLSEDCYAAWDVGRDPQSDERVWGTPAGPFVFYVVSRLDHLVP 241
            +L   LA DWSNK QA +NP  WAHIHVCFRPLP  F          S Y ESAYD+ +  PYK SVVRI    K  G LEL SYKI +  E  + G+ +  LL   T D L +LP+ CN +YEWD  + +Y   +RPGK C++ +GG     YL S+  L+ED Y +WD GRD  +DE +WG   G F FY      H VP
Sbjct:   73 KLGCCLAKDWSNKQQAAENPPLWAHIHVCFRPLPKTFFASQGIPECISFYTESAYDYMISRPYKNSVVRIAPGTKANGTLELFSYKITENPELLFYGSRDRSLLDDFTCDHLAQLPEGCNLVYEWDAVERMYRGYTRPGKQCKMPKGG-----YLCSEATLTEDHYTSWDTGRDFDTDEILWGAAGGAFDFYPEESFAHEVP 269          
BLAST of Gchil1984.t1 vs. uniprot
Match: J7GA94_9CRYP (CpeT-like protein n=2 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7GA94_9CRYP)

HSP 1 Score: 171 bits (432), Expect = 2.400e-49
Identity = 78/183 (42.62%), Postives = 121/183 (66.12%), Query Frame = 0
Query:   53 WLAADWSNKSQAMDNPQFWAHIHVCFRPLPWQFLHGYSLYCESAYDFNLGAPYKTSVVRIENDGKGQLELASYKIKQAEEFWMGAYEPQLLQSLTSDLLMRLPDACNTLYEWDEQKGVYMASSRPGKGCRIRRGGTERETYLDSQIMLSEDCYAAWDVGRDPQSDERVWGTPAGPFVFYVVSR 235
            +++ +WSNK QA   P  W+ I VC+RPL   FL G+S Y ESAYD++L  PYK  V+ +E +    LEL ++KI  +E+FW GAY+P LL+ LT D L++LP  CNT +++D +K +++  ++PGK C I R      T+LDS  +L ++ Y++ D+GRD +++ ++WG+  GPF F  V +
Sbjct:   37 YISGEWSNKEQASKFPSLWSRIQVCYRPLDVNFLKGHSFYVESAYDYSLDQPYKNGVLLVE-EKDDILELCNFKIIGSEDFWYGAYDPTLLKDLTVDRLIKLPIECNTEFQYDTEKDLFIGKTKPGKKCIIPR--KNNTTFLDSTFLLEKNKYSSLDIGRDVETEAQIWGSTEGPFRFDRVKK 216          
BLAST of Gchil1984.t1 vs. uniprot
Match: A0A6H1U367_9CYAN (Chromophore lyase CpcT/CpeT n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1U367_9CYAN)

HSP 1 Score: 166 bits (421), Expect = 6.300e-48
Identity = 82/181 (45.30%), Postives = 121/181 (66.85%), Query Frame = 0
Query:   50 LAKWLAADWSNKSQAMDNPQFWAHIHVCFRPLPWQFLHGYSLYCESAYDFNLGAPYKTSVVRIENDGKGQLELASYKIKQAEEFWMGAYEPQLLQSLTSDLLMRLPDACNTLYEWDEQKGVYMASSRPGKGCRIRRGGTERETYLDSQIMLSEDCYAAWDVGRDPQSDERVWGTPAGPFVF 230
            LA+W+AAD+SN+ QA++NP F+AHI VC RPLPW+ L G SLY E AYD+ LG PY+  V+++   G  ++++ +YKI + E+F+  A E Q LQ LT + L ++P +   + EW  +   +  +  PGK C + R G  + TYLDSQ  ++ + + + D GRDP++DE VWG+ AGPFVF
Sbjct:   10 LARWMAADFSNQEQAIENPPFFAHIRVCMRPLPWELLDGLSLYLEQAYDYMLGQPYRVRVLKLIPTGD-RIQIENYKIDEQEQFFGAAREVQRLQELTRERLEKIPGS-TFIAEWTGEG--FKGAIEPGKKCIVVRKG--KTTYLDSQFEITPEVFISHDRGRDPETDEHVWGSVAGPFVF 184          
BLAST of Gchil1984.t1 vs. uniprot
Match: UPI001ABA8043 (chromophore lyase CpcT/CpeT n=1 Tax=Aetokthonos hydrillicola TaxID=1550245 RepID=UPI001ABA8043)

HSP 1 Score: 165 bits (418), Expect = 1.840e-47
Identity = 79/181 (43.65%), Postives = 118/181 (65.19%), Query Frame = 0
Query:   50 LAKWLAADWSNKSQAMDNPQFWAHIHVCFRPLPWQFLHGYSLYCESAYDFNLGAPYKTSVVRIENDGKGQLELASYKIKQAEEFWMGAYEPQLLQSLTSDLLMRLPDACNTLYEWDEQKGVYMASSRPGKGCRIRRGGTERETYLDSQIMLSEDCYAAWDVGRDPQSDERVWGTPAGPFVF 230
            LA+W+A+D+SN+ QA +NP F+AHI VC RPLP + L G SLY E AYD+ L  PY+  V+++ + G   +E+ +Y +K+ +EF+  + +PQ L++LT D L +LP  C  + EW  Q   +     PGK C + R G  ++TYLDS+  + E+ + + D GRDP++DE +WG  AGPF F
Sbjct:   10 LARWMASDFSNQEQAFENPPFFAHIRVCMRPLPLEVLSGVSLYLEQAYDYELNHPYRVRVLKLVDAGD-HIEIENYSVKEEQEFYGASRDPQRLKALTGDRLEKLP-GCTFIVEWTGQS--FKGKVEPGKSCFVVRKG--QKTYLDSEFEIDEEKFVSHDRGRDPETDEHLWGAIAGPFQF 184          
BLAST of Gchil1984.t1 vs. uniprot
Match: UPI0015BC066D (chromophore lyase CpcT/CpeT n=1 Tax=Nostoc sp. TCL26-01 TaxID=2576904 RepID=UPI0015BC066D)

HSP 1 Score: 164 bits (416), Expect = 3.450e-47
Identity = 77/181 (42.54%), Postives = 118/181 (65.19%), Query Frame = 0
Query:   50 LAKWLAADWSNKSQAMDNPQFWAHIHVCFRPLPWQFLHGYSLYCESAYDFNLGAPYKTSVVRIENDGKGQLELASYKIKQAEEFWMGAYEPQLLQSLTSDLLMRLPDACNTLYEWDEQKGVYMASSRPGKGCRIRRGGTERETYLDSQIMLSEDCYAAWDVGRDPQSDERVWGTPAGPFVF 230
            LA+W+A+D+SN++QA +NP F+AHI VC RPLPW+ L G   + E AYD+ L  PY+  V+++      ++ + +Y +KQ E F+  + +PQLL++L+SD L +LP  CN + EW      +     PGKGC + R G  ++TYLDS+  + E+ + + D GRD ++DE +WG+ AGPF F
Sbjct:   10 LARWMASDFSNQAQAFENPPFYAHIRVCMRPLPWEVLSGVGFFVEQAYDYMLNEPYRLRVLKLMTIAD-RIHIENYTVKQEENFYGASRKPQLLKTLSSDALEKLP-GCNMIVEWTGNS--FQGKVEPGKGCIVFRKG--QKTYLDSEFEIDEEKFISLDRGRDLETDEHIWGSVAGPFYF 184          
The following BLAST results are available for this feature:
BLAST of Gchil1984.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J6RLB9_GRALE2.870e-11974.06Phycocyanobilin lyase n=2 Tax=Gracilariopsis TaxID... [more]
R7Q5L5_CHOCR5.540e-10864.55Phycocyanobilin:Cys-153 beta-phycocyanin lyase, Cp... [more]
A0A1X6NL70_PORUM3.720e-7554.55Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2YA83_GALSU3.380e-6046.94CpcT/CpeT protein family member n=1 Tax=Galdieria ... [more]
M1VHY4_CYAM11.150e-5239.66Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A5J4Z5S5_PORPP1.680e-5147.03Chromophore lyase CpcT/CpeT n=1 Tax=Porphyridium p... [more]
J7GA94_9CRYP2.400e-4942.62CpeT-like protein n=2 Tax=Chroomonas mesostigmatic... [more]
A0A6H1U367_9CYAN6.300e-4845.30Chromophore lyase CpcT/CpeT n=3 Tax=Cyanobacteria ... [more]
UPI001ABA80431.840e-4743.65chromophore lyase CpcT/CpeT n=1 Tax=Aetokthonos hy... [more]
UPI0015BC066D3.450e-4742.54chromophore lyase CpcT/CpeT n=1 Tax=Nostoc sp. TCL... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010404Chromophore lyase CpcT/CpeTPFAMPF06206CpeTcoord: 50..230
e-value: 3.2E-44
score: 151.0
IPR010404Chromophore lyase CpcT/CpeTPANTHERPTHR35137CHROMOPHORE LYASE CRL, CHLOROPLASTICcoord: 46..232
IPR010404Chromophore lyase CpcT/CpeTHAMAPMF_01460Chrphore_lyase_CpxTcoord: 43..236
score: 28.902576
IPR010404Chromophore lyase CpcT/CpeTCDDcd16338CpcTcoord: 48..230
e-value: 2.35141E-58
score: 181.743
IPR038672Chromophore lyase CpcT/CpeT superfamilyGENE3D2.40.128.590CpcT/CpeT domaincoord: 46..243
e-value: 5.8E-49
score: 168.6
NoneNo IPR availablePANTHERPTHR35137:SF1CHROMOPHORE LYASE CRL, CHLOROPLASTICcoord: 46..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004439_piloncontigtig00004439_pilon:1564519..1565298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1984.t1Gchil1984.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004439_pilon 1564519..1565298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1984.t1 ID=Gchil1984.t1|Name=Gchil1984.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=260bp
MIASQPAFTSVPLPRGARARARAPLRRRPYCATTPPLSGTPGTGINARRL
AKWLAADWSNKSQAMDNPQFWAHIHVCFRPLPWQFLHGYSLYCESAYDFN
LGAPYKTSVVRIENDGKGQLELASYKIKQAEEFWMGAYEPQLLQSLTSDL
LMRLPDACNTLYEWDEQKGVYMASSRPGKGCRIRRGGTERETYLDSQIML
SEDCYAAWDVGRDPQSDERVWGTPAGPFVFYVVSRLDHLVPDEQSALVVG
PEASPRGGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010404CpcT/CpeT
IPR038672CpcT/CpeT_sf