Gchil1937.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil1937.t1 vs. uniprot
Match: A0A2V3IEY3_9FLOR (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEY3_9FLOR) HSP 1 Score: 203 bits (517), Expect = 3.350e-58 Identity = 135/378 (35.71%), Postives = 193/378 (51.06%), Query Frame = 0
Query: 2 CGTPLRPPM-LRKHLQ-RCPAAARAAAVAARPWFVPNVNDAPPDXXXXXXXXXXXXXXXXXTLVAPVRAARLRALGLLEHALRTDAAERQAAA--DTATVRALWGDTRDSSLRLQPRHFAQMSALTALSLHATQPHQHATPFIVELGAGRAYLSLFAAHMLRLRGLRPRIAAIDRRAPRFRADRTLRAWTTGRLVSDFARFTTELSHVELALVPGVLDASHVLLLGKHVCGDGTDISLAAATRLAR-VAPHTS----VVSLVLAPCCRALCSARSCVARAWWRPRRALPLFAQLCRLSARSLHVADHNHHVHPAAXXXXXXXXXXXXXXXXXXXXXXXRVAIDSARVRWLRRNGWRAHLYRYTQHSPEDLCIVATWSP 370
CGT LR L+KH+ RCP R W+ + N PP PV A L L+ AL R AA + + W D RDSS+++QP+HF Q+++L AL+L + P Q P ++ELGAGRAY ++FAA++L LR P + DR R++ADRTLRAW + ++ F R TT+L+ +++ +P + + V +LGKH+CGD +D+++ ATRLAR + H + V++LVLA CCRALC+ R+ +P + FA + A L N R+ IDSARV+W+ NGW+A L YT+ SPE+ CIVATW+P
Sbjct: 49 CGTRLRDAAALKKHVTARCPVTRRRRVAQQANWYSASTNLPPPSTANNI----------------PVARALPLVLHTLQTALPAPRKMRAPAALPELRLISDAWSDQRDSSVKMQPKHFTQIASLCALALSSHTPSQPHQPAVIELGAGRAYTAMFAANVLSLRDDPPHVLVTDRHTTRWKADRTLRAWQSTGKIASFTRCTTDLADLDMRRLPFLQTCNRVYILGKHLCGDASDLAIYGATRLARHLHQHANDTPAVITLVLACCCRALCTDRTYTFDQCLKPHISPSEFAAITPCCALGLDEKRRN----------------------KPHLGNQCRLLIDSARVQWMNANGWQAALCTYTKVSPENTCIVATWNP 388
BLAST of Gchil1937.t1 vs. uniprot
Match: R7QPM9_CHOCR (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPM9_CHOCR) HSP 1 Score: 145 bits (366), Expect = 2.920e-36 Identity = 117/367 (31.88%), Postives = 155/367 (42.23%), Query Frame = 0
Query: 11 LRKHLQRCPAAARAAAVAARPWFVPNVNDAPPDXXXXXXXXXXXXXXXXXTLVAPVRAARLRALG---LLEHALRTDAAERQ-AAADTATVRALWGDTRDSSLRLQPRHFAQMSALTALSLHATQPHQHATPFIVELGAGRAYLSLFAAHMLRLRGLRPRIAAIDRRAPRFRADRTLRAWTTGR--LVSDFARFTTELSHVELALVPGVLDASHVLLLGKHVCGDGTDISLAAATRLARVAPH-TSVVSLVLAPCCRALC--SARSCVARAWWRPRRALPLFAQLCRLSARSLHVADHNHHVHPAAXXXXXXXXXXXXXXXXXXXXXXXRVAIDSARVRWLRRNGWRAHLYRYTQHSPEDLCIVATW 368
L KHL CPAA R +PW VP N RL + G L + T +R + A + A W D+R+S ++L+P+HFAQ L A LH + A ++ELGAGRAY SL+ AH+L RGL A+DR R +ADRT+R W + F R +++ + V + A+ V L+GKHVCG D SL AAT AR V L+ A CCR LC + W + +CRL+ L + R+ +D RVRWLRR GW A+ YT SPE+ CI A W
Sbjct: 40 LSKHLPICPAARRIRKEREQPWCVPACNIYRQSVSYKQTLYSKSPLQLDEIEHVMKTVQRLLSTGKDSLAPPWVPTLPVQRSFLLEEDADIAAEWADSRNSQMKLEPKHFAQFGPLAASLLHHPPTDKLA---VLELGAGRAYTSLYVAHVLHKRGLPASFVAVDRAGGRHKADRTIRNWVDNADSPLRTFRRIKCDVADFRIREVDEIRTATDVRLIGKHVCGAALDASLNAATNFAREERKGAGEVRLIFACCCRRLCRWDWLGEAQKIWLDWGVDDKFYEVICRLAQWGLDQKQAQEYAE---------------------IGKKCRLLLDMGRVRWLRRQGWDAYCGEYTTASPENRCIAAVW 382
BLAST of Gchil1937.t1 vs. uniprot
Match: A9T567_PHYPA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T567_PHYPA) HSP 1 Score: 59.3 bits (142), Expect = 5.830e-6 Identity = 44/142 (30.99%), Postives = 72/142 (50.70%), Query Frame = 0
Query: 140 IVELGAGRAYLSLFAAHMLRLRGLRPRIAAIDRRAPRFRADRTLRAWTTGRLVSDFARFTTELSHVELALVPGVLDASHVLLLGKHVCGDGTDISLAAATRL------ARVAPHTSVVSLVLAPCCRALCSARSCVARAWWR 275
IVELGAGR YLS + ++ ++RRA +F+ADRT+R + G ++ R ++ + L V +L HV+ + KH+CG TD+SL + A+ V + +A CC LC +S V + +++
Sbjct: 247 IVELGAGRGYLSQMLCDCYTVH----KVVMVERRAYKFKADRTIRH-SNGLILE---RLRLDIEDLNLNQVS-LLQDCHVVAISKHLCGPATDLSLRCCLKTIPNQKDAQSQVKPVVDGIAIATCCHHLCQWKSYVNKKYFK 379 The following BLAST results are available for this feature:
BLAST of Gchil1937.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil1937.t1 ID=Gchil1937.t1|Name=Gchil1937.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=385bpback to top |