Gchil1936.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil1936.t1 vs. uniprot
Match: A0A2V3IES9_9FLOR (Pentatricopeptide repeat-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IES9_9FLOR) HSP 1 Score: 213 bits (541), Expect = 2.410e-55 Identity = 129/206 (62.62%), Postives = 142/206 (68.93%), Query Frame = 0
Query: 16 ALVRSHAAAQPAAQPPPRPAFPTAARALDRAVAAAWGAPVTLHPVQSIWASTGVWTADDPKRRRRDA-RTVPPADAVLCPTAAAATAAHPDRPAAPSVVCAVXXXXXXXXXXXXXXAAAPAAHLP---TSDPHVVRQLENCLRRRKVDRARDILFENAPRRVFRTRHYNSLLDALVKANRLHDAEMLFAEFDRNGLLRDVASFSIM 217
ALVR+ AAAQ PR + TAARALDRAVAAAWGAPV+LHPVQSIWA+TGVWTADDPKRRRRD R VPPA+AVLCPT +AAH P + + A H P +SDP +VR LEN LRRRK+DRARDILFEN VF TRHYNSLLDA VKANRL DAE+LFAEF RN L DVAS+SIM
Sbjct: 68 ALVRNTAAAQXXXXXXPRAPYATAARALDRAVAAAWGAPVSLHPVQSIWANTGVWTADDPKRRRRDPHRPVPPAEAVLCPTVEPPSAAHSAPPLSTLI--------PPSAPTPLRTHVNSAQHTPPAKSSDPDLVRLLENSLRRRKLDRARDILFENFGTAVFHTRHYNSLLDAFVKANRLPDAELLFAEFGRNSLTPDVASYSIM 265
BLAST of Gchil1936.t1 vs. uniprot
Match: R7QMM7_CHOCR (PPR_long domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMM7_CHOCR) HSP 1 Score: 96.3 bits (238), Expect = 7.650e-17 Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 0
Query: 139 PTSDPHVVRQLENCLRRRKVDRARDILFENAPRRVFRTRHYNSLLDALVKANRLHDAEMLFAEFDRNGLLRDVASFSIMI 218
P VVRQLENC+RRRK+D+ARDIL +A RVF TRHYN+LL AL K+NR+ +AE LF +F +GL DVAS SIMI
Sbjct: 198 PQDQVDVVRQLENCIRRRKLDKARDILLGHATTRVFGTRHYNALLAALAKSNRVDEAERLFCQFANSGLAHDVASHSIMI 277
BLAST of Gchil1936.t1 vs. uniprot
Match: A0A1X6NU58_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU58_PORUM) HSP 1 Score: 69.7 bits (169), Expect = 1.190e-8 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 0
Query: 145 VVRQLENCLRRRKVDRARDILFENAPRRVFRTRHYNSLLDALVKANRLHDAEMLFAEFDRN-GLLRDVASFSIMICAYGK 223
++R+LE CLR+RK+DRA I+ E + RH N++LDAL K+ R+ +A+ LF +FD L RDVA+ SIM+ YGK
Sbjct: 373 LLRRLETCLRKRKLDRALAIVREGVTAHLLGVRHANAVLDALGKSGRVAEAQKLFEQFDHPLALRRDVATHSIMVSTYGK 452
BLAST of Gchil1936.t1 vs. uniprot
Match: A0A5J4YX80_PORPP (Pentatricopeptide repeat-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX80_PORPP) HSP 1 Score: 64.7 bits (156), Expect = 5.090e-7 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 0
Query: 133 APAAHLP-TSDPHVVRQLENCLRRRKVDRARDILFENAPRRVFRTRHYNSLLDALVKANRLHDAEMLFAEFDRNGLLRDVASFSIMICAYGK 223
A +AH+P + + +LE+ LR R+V A +L E RVF TRHYN++LDAL K ++ +AE LF+ DVAS+SIMI Y K
Sbjct: 242 ATSAHVPKATQRRLAARLESALRERRVADACALLHEYGSMRVFSTRHYNAVLDALCKGQKVAEAERLFSSLSSP----DVASYSIMISMYAK 329 The following BLAST results are available for this feature:
BLAST of Gchil1936.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil1936.t1 ID=Gchil1936.t1|Name=Gchil1936.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=724bpback to top |