Gchil1906.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1906.t2
Unique NameGchil1906.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length467
Homology
BLAST of Gchil1906.t2 vs. uniprot
Match: A0A2V3ILG0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG0_9FLOR)

HSP 1 Score: 445 bits (1145), Expect = 2.050e-150
Identity = 239/434 (55.07%), Postives = 296/434 (68.20%), Query Frame = 0
Query:   35 ARDELLRHLLPVPPSFTLITSTSCTECVSHHLLFEDTARHPSVQNLRPLSITLHPSPSSSPPNDIRLTLEQETEKGTQLFFLSFANAVLVHALTSSSWLSPPKKGKRVRPRTSFVIGILPNDEYSSP-SIDSWLFPMRNPERDPAASSPGDFLLPGESAAVMLYGAVCGMAATMIGNDVKTVSEMHLFVVPKKVLTVLHRFAQAASNILSGGEHLQQLLDEGEQQVEDDIYTLRRHALANNLPCGCVMFPHASNPSKSVPKCVPPPAIHVRVLRAMQLGSKEVEQWWRTHG-NICEVNYLRQSYLHHLRGADLNVSIRAHLSYLQLFHAHRPSNALYALHDQLNQTPTRDWELKEAFEWLAKAFRGSEGRAKERMCSDDNEKQHEVFERELAYQVFGRLALFRTRNEVVRKFVSRLETIAGPTRRDTKGVVEEF 466
            AR+ LL+HLLP  P+ TL+ S+S  ECV+HHLLF  T  H S+Q+L P  +TLH  PS+SPP DI   L+      TQL F+SFA+A  V +L++   L P KKG+R     SFV+ +LPN++      +   L  + + E + + S  GDFLLP ESAAVMLYG VCGMAA +   +      +  FV+P KVL VL RF  AAS   +  + LQQLLDE   +VEDD++TL RHALA+NLPC CV+FP+  NPSKSVPKC PPPA+H RVLRA+ L    VE+WW +   N CE++YL  SYLHHLRGA    S+ AHLSY QL H+HRPS AL+ LH Q+   P  DWE+KEA EWLAK FR SE   ++R+C +D + Q  VFERELA+QVFGRLALFR RNEVVRKFV+ LE  AGPTRR  KGV+EEF
Sbjct:   35 ARNALLKHLLPKLPNLTLLRSSSSAECVAHHLLFGKTYSHFSLQHLHPQFVTLHAVPSASPPVDIEPILKHIQASKTQLVFISFASAPFVRSLSAFLELRP-KKGRRASSNISFVVALLPNEKPPPRLQVQHSLLRIDDSEYESSFSGSGDFLLPSESAAVMLYGVVCGMAAALRDEEPHNNPSLQPFVMPMKVLAVLRRFTHAASRTTTDEKELQQLLDEERHKVEDDLFTLSRHALAHNLPCACVVFPYVGNPSKSVPKCTPPPALHARVLRALGLAPHSVEEWWCSPSTNPCELHYLGHSYLHHLRGAKATASVSAHLSYPQLLHSHRPSVALHLLHAQMCALPLWDWEMKEAIEWLAKTFRASEVCIEKRLCIEDADNQQAVFERELAFQVFGRLALFRNRNEVVRKFVAGLEISAGPTRRQEKGVLEEF 467          
BLAST of Gchil1906.t2 vs. uniprot
Match: A0A2V3IU40_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU40_9FLOR)

HSP 1 Score: 105 bits (262), Expect = 1.000e-23
Identity = 54/98 (55.10%), Postives = 69/98 (70.41%), Query Frame = 0
Query:  221 FVVPKKVLTVLHRFAQAASNILSGGEHLQQLLDEGEQQVEDDIYTLRRHALANNLPCGCVMFPHASNPSKSVPKCVPPPAIHVRVLRAMQLGSKEVEQ 318
            FVV  +VLT L RF  AASN ++  + LQQLLD+  Q+VED  +TL RHALA++L CGC++ P+  NPSKSVPKC  P A+H RVLRA+ L     E+
Sbjct:   19 FVVTIEVLTGLRRFTHAASNTMTDEKELQQLLDKQRQKVEDGPFTLSRHALAHDLVCGCMVVPYFDNPSKSVPKCTTPSAMHARVLRAIGLDPNGAEE 116          
The following BLAST results are available for this feature:
BLAST of Gchil1906.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ILG0_9FLOR2.050e-15055.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IU40_9FLOR1.000e-2355.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004439_piloncontigtig00004439_pilon:1091157..1092557 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1906.t2Gchil1906.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00004439_pilon 1091157..1092557 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1906.t2 ID=Gchil1906.t2|Name=Gchil1906.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=467bp
MGATNFPARKNPRQESHSNNTSFAVNLPQRSSTEARDELLRHLLPVPPSF
TLITSTSCTECVSHHLLFEDTARHPSVQNLRPLSITLHPSPSSSPPNDIR
LTLEQETEKGTQLFFLSFANAVLVHALTSSSWLSPPKKGKRVRPRTSFVI
GILPNDEYSSPSIDSWLFPMRNPERDPAASSPGDFLLPGESAAVMLYGAV
CGMAATMIGNDVKTVSEMHLFVVPKKVLTVLHRFAQAASNILSGGEHLQQ
LLDEGEQQVEDDIYTLRRHALANNLPCGCVMFPHASNPSKSVPKCVPPPA
IHVRVLRAMQLGSKEVEQWWRTHGNICEVNYLRQSYLHHLRGADLNVSIR
AHLSYLQLFHAHRPSNALYALHDQLNQTPTRDWELKEAFEWLAKAFRGSE
GRAKERMCSDDNEKQHEVFERELAYQVFGRLALFRTRNEVVRKFVSRLET
IAGPTRRDTKGVVEEF*
back to top