Gchil1806.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1806.t1
Unique NameGchil1806.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length106
Homology
BLAST of Gchil1806.t1 vs. uniprot
Match: A0A2V3IGY7_9FLOR (NADH-u_ox-rdase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGY7_9FLOR)

HSP 1 Score: 171 bits (434), Expect = 1.290e-53
Identity = 82/104 (78.85%), Postives = 91/104 (87.50%), Query Frame = 0
Query:    1 MAHPINDPTFPVIDSDPSFGKVMSSLRARDWQNAALATFVSLPFGYAAGRPVVMRPSMYMAGVIGASFGLFLGFQNSFTRLTGYKENAVEIAKYGSKGTVSKSS 104
            MAHPINDP FPVID DPSFGKVMS+ R  DWQNA LAT +S+PFGYAAGRPV+MRPSMYMAG+IGASFGLFLGFQNSF RLTGYKENA E AK+ S+ +VS +S
Sbjct:    1 MAHPINDPKFPVIDRDPSFGKVMSAFRTSDWQNATLATVLSVPFGYAAGRPVLMRPSMYMAGIIGASFGLFLGFQNSFARLTGYKENAAEAAKFASEKSVSGTS 104          
BLAST of Gchil1806.t1 vs. uniprot
Match: R7Q7T4_CHOCR (NADH-ubiquinone oxidoreductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7T4_CHOCR)

HSP 1 Score: 142 bits (359), Expect = 2.610e-41
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 0
Query:    1 MAHPINDPTFPVIDSDPSFGKVMSSLRARDWQNAALATFVSLPFGYAAGRPVVMRPSMYMAGVIGASFGLFLGFQNSFTRLTGYKENAVEIAKY 94
            M +PIN PT  VI  DPSFG+VMS+ RA DWQN ALAT +S+PFGY AGRP+VMRPSMY A  IGA FGL LGFQ+SF RLTGYKENA+E+AKY
Sbjct:   68 MTYPINPPTHQVITRDPSFGQVMSAFRAGDWQNLALATGISMPFGYWAGRPIVMRPSMYAAATIGALFGLSLGFQSSFARLTGYKENALEVAKY 161          
BLAST of Gchil1806.t1 vs. uniprot
Match: A0A6V2QQX1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2QQX1_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.140e-14
Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 0
Query:    4 PINDPTFPVIDSDPSFGKVMSSLRARDWQNAALATFVSLPFGYAAGRPVVMRPSMYMAGVIGASFGLFLGFQNSFTRLTGYKENAVEIAKYG 95
            P +DP FPV+++DPS    ++SLR RD+      T  S  +GY  G+P+    +   A  IG +F  F+  Q++ +RL GYKEN VE+ KYG
Sbjct:    2 PYSDPKFPVVNNDPSVDDCINSLRKRDYMALFGLTGASWGYGYMVGKPL-RGATASTAAAIGFTFASFVVLQDTRSRLLGYKENGVEVKKYG 92          
BLAST of Gchil1806.t1 vs. uniprot
Match: A0A0L0D2G3_THETB (NADH-u_ox-rdase domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D2G3_THETB)

HSP 1 Score: 58.9 bits (141), Expect = 3.450e-9
Identity = 32/88 (36.36%), Postives = 53/88 (60.23%), Query Frame = 0
Query:   10 FPVIDSDPSFGKVMSSLRARDWQNAALATFVSLPFGYAAGRPVVMRPSMYMAGVIGASFGLFLGFQNSFTRLTGYKENAVEIAKYGSK 97
            +PV+++ P+  + +++    D    AL T +SLPFG+A G+P+ M+ +M MAG IG   G    +QN+  RL G  EN  E+ ++ S+
Sbjct:   11 YPVVNAAPNVAETVANFSMGDVSKWALMTGLSLPFGWAIGKPIRMQ-TMVMAGSIGFVGGFMWAYQNAAGRLMGTFENKSEVKRHYSQ 97          
BLAST of Gchil1806.t1 vs. uniprot
Match: B8BVH7_THAPS (NADH-u_ox-rdase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVH7_THAPS)

HSP 1 Score: 59.7 bits (143), Expect = 3.550e-9
Identity = 36/94 (38.30%), Postives = 48/94 (51.06%), Query Frame = 0
Query:    4 PINDPTFPVIDSDPSFGKVMSSLRARDWQNAALATFVSLPFGYAAGRPVVMR-PSMYMA-GVIGASFGLFLGFQNSFTRLTGYKENAVEIAKYG 95
            P  DP F V++  P   + + SLR  D+  A   T  S  +GY  G+P  M   S  MA G+  A   +    QN  +RL GY+EN VE+ KYG
Sbjct:    2 PYGDPKFTVVNPSPDVDQTLRSLRTSDYLLATFITSASWAYGYTMGKPTRMACASTAMALGMTAAGMAVL---QNGRSRLRGYRENEVEVKKYG 92          
BLAST of Gchil1806.t1 vs. uniprot
Match: A0A6G0WJZ9_9STRA (NADH-u_ox-rdase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJZ9_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.540e-8
Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 0
Query:    7 DPTFPVIDSDPSFGKVMSSLRARDWQNAALATFVSLPFGYAAGRPVVMRPSMYMAGVIGASFGLFLGFQNSFTRLTGYKE 86
            +P +PV    PSF     +  A D+   A  T VS+  G+A+G+PV + P+    G++G + G    F+NS +RL GYKE
Sbjct:    9 EPKYPVKMKYPSFNDTTDNFNASDYLTIAAFTAVSVAVGFASGKPVRV-PAAVTTGILGYAGGYLYAFENSASRLQGYKE 87          
BLAST of Gchil1806.t1 vs. uniprot
Match: A0A485LKP6_9STRA (Aste57867_22386 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKP6_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 3.880e-6
Identity = 31/88 (35.23%), Postives = 45/88 (51.14%), Query Frame = 0
Query:    1 MAHPIND--PTFPVIDSDPSFGKVMSSLRARDWQNAALATFVSLPFGYAAGRPVVMRPSMYMAGVIGASFGLFLGFQNSFTRLTGYKE 86
            MA PI+   P +PV    PSF     +  A D+      + VS   G+A G+PV + P+    G +G+  G    FQNS +RL G++E
Sbjct:    1 MATPIDPRLPKYPVKMKYPSFNDTTDNFNASDYLTIITFSAVSFAAGFALGKPVRV-PASIATGALGSVGGYLYAFQNSASRLQGFRE 87          
BLAST of Gchil1806.t1 vs. uniprot
Match: A0A146I4X4_9AGAR (Uncharacterized protein n=2 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146I4X4_9AGAR)

HSP 1 Score: 52.4 bits (124), Expect = 5.240e-6
Identity = 30/97 (30.93%), Postives = 46/97 (47.42%), Query Frame = 0
Query:   10 FPVIDSDPSFGKVMSSLRARDWQNAALATFVSLPFGYAAGRPVV-------------MRPSMYMAGVIGASFGLFLGFQNSFTRLTGYKENAVEIAK 93
            +P+ID+DP+ G+V++ +R  D+   A         GY AG P +             MRP MY   V+G   G F+ +  S  R  G+ EN  E+ +
Sbjct:   17 YPLIDTDPTAGRVLAYMRPSDYAQWA---------GYTAGTPALLYAWEKIDRTGGRMRPYMYTGAVLGCVAGFFVAYSRSTKRFWGWTENEREVKR 104          
The following BLAST results are available for this feature:
BLAST of Gchil1806.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IGY7_9FLOR1.290e-5378.85NADH-u_ox-rdase domain-containing protein n=1 Tax=... [more]
R7Q7T4_CHOCR2.610e-4172.34NADH-ubiquinone oxidoreductase n=1 Tax=Chondrus cr... [more]
A0A6V2QQX1_9STRA4.140e-1441.30Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A0L0D2G3_THETB3.450e-936.36NADH-u_ox-rdase domain-containing protein n=1 Tax=... [more]
B8BVH7_THAPS3.550e-938.30NADH-u_ox-rdase domain-containing protein n=1 Tax=... [more]
A0A6G0WJZ9_9STRA1.540e-837.50NADH-u_ox-rdase domain-containing protein n=1 Tax=... [more]
A0A485LKP6_9STRA3.880e-635.23Aste57867_22386 protein n=1 Tax=Aphanomyces stella... [more]
A0A146I4X4_9AGAR5.240e-630.93Uncharacterized protein n=2 Tax=Mycena chlorophos ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019721NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminalPFAMPF10785NADH-u_ox-rdasecoord: 8..86
e-value: 8.6E-20
score: 71.2
NoneNo IPR availablePANTHERPTHR34062:SF1OXIDOREDUCTASE 21 KDA SUBUNIT, PUTATIVE (AFU_ORTHOLOGUE AFUA_4G04750)-RELATEDcoord: 6..100
NoneNo IPR availablePANTHERPTHR34062OXIDOREDUCTASE 21 KDA SUBUNIT, PUTATIVE (AFU_ORTHOLOGUE AFUA_4G04750)-RELATEDcoord: 6..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..105
NoneNo IPR availableTMHMMTMhelixcoord: 52..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:2594111..2594531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1806.t1Gchil1806.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 2594111..2594531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1806.t1 ID=Gchil1806.t1|Name=Gchil1806.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=106bp
MAHPINDPTFPVIDSDPSFGKVMSSLRARDWQNAALATFVSLPFGYAAGR
PVVMRPSMYMAGVIGASFGLFLGFQNSFTRLTGYKENAVEIAKYGSKGTV
SKSSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019721NADH-UbQ_OxRdtase_su21_N