Gchil1784.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1784.t1
Unique NameGchil1784.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length295
Homology
BLAST of Gchil1784.t1 vs. uniprot
Match: A0A2V3J5B2_9FLOR (Melanoma-associated antigen 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5B2_9FLOR)

HSP 1 Score: 380 bits (977), Expect = 3.270e-130
Identity = 196/296 (66.22%), Postives = 235/296 (79.39%), Query Frame = 0
Query:    1 MGRK--RSLSNRTSQSQNNVDDGEVLDVNSSSAADSGYVPLTDTQQDELAKRISRMLLWRQHRKRPVRRADLSSYALKLLPHVRGRP--FSKAFNRARDMMRQNLALEVKEIQKLTKRKVGGQSRSV--ATASQAYGYGYGAKGYILVSNATKP-RLEVPDILCEIGFLTLIAALIALQPGCRIEEDTLHHMLSKLGVHVREKQGHKQLNNGNVKDLLEVKFIDMWYLEKEKEDNVTYYLLGPRLRAELSDDDLLEFIHAVYKDGPSGHGLLDENGRNEIKARLNDAWGPEGPPDE 289
            MGR+  R+ SNRTSQSQN ++D E+ D + +S A+SG+  L++ QQDEL KRI R L     RKRPV+R +L+S+  K +P++R  P  F+ A  +AR   R NL +E+KEIQKLTKRK+GG SRS    +ASQ    GYGAKGY+L +      R E P++LCEIGFLTL+AALIALQPGCRIEEDTL H L++LGV+VREKQGHKQLN GNVK+LLE KFIDMWYLE+EKEDN+TYYLLGPRLRAE SD+DLLEFIHAVYKDGPSGHGLLDE GRNEIKARL+ AWGP+GPP+E
Sbjct:    1 MGRRGSRTQSNRTSQSQNVMNDEEMADFDRASQAESGFAALSEAQQDELVKRILRFLXXXXXRKRPVKRTELNSFVFKNIPNIRSTPRVFNGALEKARHFFRTNLGVEIKEIQKLTKRKIGGHSRSTIGTSASQGNSLGYGAKGYVLTTTLPNAHRHETPELLCEIGFLTLVAALIALQPGCRIEEDTLRHTLARLGVYVREKQGHKQLNGGNVKELLENKFIDMWYLEREKEDNITYYLLGPRLRAEFSDEDLLEFIHAVYKDGPSGHGLLDETGRNEIKARLDAAWGPDGPPEE 296          
BLAST of Gchil1784.t1 vs. uniprot
Match: R7QHC7_CHOCR (MAGE domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHC7_CHOCR)

HSP 1 Score: 194 bits (493), Expect = 7.790e-57
Identity = 110/258 (42.64%), Postives = 153/258 (59.30%), Query Frame = 0
Query:   28 SSSAADSGYVPLTDTQQDELAKRISRMLLWRQHRKRPVRRADLSSYALKLLPHVRGRP--FSKAFNRARDMMRQNLALEVKEIQKLTKRKVGGQSRSVATASQAYGYGYGAKGYILVSNATKP-RLEVPDILCEIGFLTLIAALIALQPGCRIEEDTLHHMLSKLGVHVREKQGHKQLNNGNVKDLLEVKFIDMWYLEKEKEDNVTYYLLGPRLRAELSDDDLLEFIHAVYKDGPSGHGLLDENGRNEIKARLNDAWG 282
            SSS  D G+  L + QQDEL KR+ R+++ R   KRPV+R +LS +    +  VR +   F   FN A+  +R    +++  IQ+  K      SR+    +Q+   G   KGYILVS      R E        GFL ++A +I L+PGCRIE+  L+  L ++GVHV EK GH+QLN GNVK+LLE   +  WYLE+EKED   Y++LGPR RAE+  +DL+EF+ AVY    S  G LDE  ++E++ RL+D  G
Sbjct:   43 SSSLPDGGFSALAEEQQDELVKRVIRLMICRNAEKRPVKREELSRHMFANMAPVRSKSKVFQGTFNVAQQKLRSIFGMQMVLIQRQVKANQSASSRTQTQLTQSGPVG--TKGYILVSVLPPELRAEERKDRAGFGFLMVVAGMILLEPGCRIEQGALYRALGRVGVHVTEKNGHRQLNGGNVKELLESTLLRQWYLEREKEDQTFYFMLGPRFRAEIGPEDLVEFVGAVYNLSDSKTGGLDETSKSELRKRLDDTSG 298          
BLAST of Gchil1784.t1 vs. uniprot
Match: A0A1X6P3K6_PORUM (MAGE domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3K6_PORUM)

HSP 1 Score: 99.8 bits (247), Expect = 7.560e-21
Identity = 86/258 (33.33%), Postives = 118/258 (45.74%), Query Frame = 0
Query:   28 SSSAADSGYVPLTDTQQDELAKRISRMLLWRQHRKRPVRRADLSSYALKLLPHVRGRPFSKAFNRARDMMRQNLALEVKEIQKLTKRKVGGQSRSVATASQAYGYGYGAKGYILVSNATKPRLEVP---DILCEIGFLTLIAALIALQPGCRIEEDTLHHMLSKLGVHVREKQG------HKQLNNGNVKDLLEVKFIDMWYLEKEKEDNVTYYLLGPRLRAELSDDDLLEFIHAVYKDGPSGHGLLDENGRNEIKAR 276
            SS A    +  L+   QD+L  RI R +L R   + PVRR +LS      +P  R +   +     + + +  L LE  EI +    + G               G     YIL+S   K     P   D    +GFLTL+AALI L+PGCR+ E  L   L+KLG+             H+QL  G+V+ L+        YLE+EKE +    LLGPRLRAELS +DLL F+   +         LD   R+E+  R
Sbjct:   39 SSQAEGKAFNDLSGEDQDKLVGRIVRRMLVRNVSRVPVRREELSKALGNDIPRKR-KLLQEVIESTKRVFKAELGLEFVEIHRRIAHR-GXXXXXXXXXXXXAAMGSSTTAYILISALPKDLRPEPMSEDDTAMLGFLTLLAALILLEPGCRLSEADLFMSLAKLGLGTAAGATAATPVVHQQL--GDVRVLVTKTLPSQGYLEREKEGDSAVLLLGPRLRAELSLEDLLTFVEMAFGSD------LDATTRSELTQR 286          
The following BLAST results are available for this feature:
BLAST of Gchil1784.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J5B2_9FLOR3.270e-13066.22Melanoma-associated antigen 8 n=1 Tax=Gracilariops... [more]
R7QHC7_CHOCR7.790e-5742.64MAGE domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A1X6P3K6_PORUM7.560e-2133.33MAGE domain-containing protein (Fragment) n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002190MAGE homology domainSMARTSM01373MAGE_2coord: 51..247
e-value: 2.8E-8
score: 35.8
IPR002190MAGE homology domainPFAMPF01454MAGEcoord: 53..243
e-value: 7.1E-20
score: 71.6
IPR041899MAGE homology domain, winged helix WH2 motifGENE3D1.10.10.1210MAGE homology domain, winged helix WH2 motifcoord: 149..267
e-value: 3.4E-16
score: 61.0
IPR041898MAGE homology domain, winged helix WH1 motifGENE3D1.10.10.1200MAGE homology domain, winged helix WH1 motifcoord: 38..146
e-value: 2.6E-7
score: 32.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..294
NoneNo IPR availablePANTHERPTHR11736:SF14MAGE PROTEINcoord: 20..263
IPR037445Melanoma-associated antigenPANTHERPTHR11736MELANOMA-ASSOCIATED ANTIGEN MAGE ANTIGENcoord: 20..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:2425744..2426628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1784.t1Gchil1784.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 2425744..2426628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1784.t1 ID=Gchil1784.t1|Name=Gchil1784.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=295bp
MGRKRSLSNRTSQSQNNVDDGEVLDVNSSSAADSGYVPLTDTQQDELAKR
ISRMLLWRQHRKRPVRRADLSSYALKLLPHVRGRPFSKAFNRARDMMRQN
LALEVKEIQKLTKRKVGGQSRSVATASQAYGYGYGAKGYILVSNATKPRL
EVPDILCEIGFLTLIAALIALQPGCRIEEDTLHHMLSKLGVHVREKQGHK
QLNNGNVKDLLEVKFIDMWYLEKEKEDNVTYYLLGPRLRAELSDDDLLEF
IHAVYKDGPSGHGLLDENGRNEIKARLNDAWGPEGPPDEREEHN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002190MHD_dom
IPR041899MAGE_WH2
IPR041898MAGE_WH1
IPR037445MAGE