Gchil1718.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1718.t1
Unique NameGchil1718.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length188
Homology
BLAST of Gchil1718.t1 vs. uniprot
Match: A0A2V3IW20_9FLOR (54S ribosomal protein L51, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW20_9FLOR)

HSP 1 Score: 284 bits (727), Expect = 1.180e-95
Identity = 135/187 (72.19%), Postives = 163/187 (87.17%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVRDFVEHGLVSFARKNPHIQFQTEIKGGHPCVFCKYVTGYERQRTLKNISAEEVGETLQLLRDTLGRRVPAHNQLGTGVVEKRAVSVQGVWRNRADLNPPETAETLELREKRRQEYSVDSIIEKYGVTGLVKITQSLLENRERMRLAALAAMPKKERVMPTE 187
            MARNG+WELREVLLRYCA+SGSSRGVR+FVEH L+SFA KN  IQFQT+I+GGHPCV+ KYVTGYERQR+LKN+SAEEVG+  QLLRDTLGRRVPAHN+ GTGVVEK  VSVQGVWRNR +   PET E LELR++R ++YSV+ +++++G+ G V++TQ LLE RE++ LAALA MPKKERV+PTE
Sbjct:    1 MARNGIWELREVLLRYCASSGSSRGVREFVEHDLISFAAKNSQIQFQTKIQGGHPCVYAKYVTGYERQRSLKNMSAEEVGQIFQLLRDTLGRRVPAHNEFGTGVVEKTGVSVQGVWRNRPEFALPETNEMLELRKRRHRDYSVERVVDEFGLEGFVRMTQKLLEQREKVHLAALAEMPKKERVVPTE 187          
BLAST of Gchil1718.t1 vs. uniprot
Match: R7QME5_CHOCR (L51_S25_CI-B8 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QME5_CHOCR)

HSP 1 Score: 229 bits (585), Expect = 4.820e-74
Identity = 111/187 (59.36%), Postives = 139/187 (74.33%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVRDFVEHGLVSFARKNPHIQFQTEIKGGHPCVFCKYVTGYERQRTLKNISAEEVGETLQLLRDTLGRRVPAHNQLGTGVVEKRAVSVQGVWRNRADLNPPETAETLELREKRRQEYSVDSIIEKYGVTGLVKITQSLLENRERMRLAALAAMPKKERVMPTE 187
            MAR GVWEL EV++RYCA+SGSSRG+R+FV   L  FA +NP I F+TEI+GGHPCVF KY+TGYER  TLKN+S E++G+    LR+TLGR+VP HN++  GVVEK   SVQG WRN A L   E  E  +LRE+RRQEY + S+I+  GVTG+V+ITQ LLE +E  + AAL A PK E++  TE
Sbjct:    1 MARRGVWELNEVIVRYCASSGSSRGIREFVAKDLADFAERNPQITFKTEIRGGHPCVFGKYITGYERSITLKNLSPEKIGDVFTYLRNTLGRKVPKHNEISIGVVEKNQESVQGFWRNSATLLEKELPEVTQLRERRRQEYGLQSMIDDVGVTGIVRITQKLLERQEMAKQAALDAEPKVEKIRATE 187          
BLAST of Gchil1718.t1 vs. uniprot
Match: A0A1X6P6K6_PORUM (L51_S25_CI-B8 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6K6_PORUM)

HSP 1 Score: 128 bits (322), Expect = 7.780e-34
Identity = 70/172 (40.70%), Postives = 99/172 (57.56%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVRDFVEHGLVSFARKNPHIQFQTEIKGGHPCVFCKYVTGYERQRTLKNISAEEVGETLQLLRDTLGRRVPAHNQLGTGVVEKRAVSVQGVWRNRAD--LNPPETAETLELREKRRQEYSVDSIIEKYGVTGLVKITQSLLENRERMR 170
            MAR GV+ELR+VLLRY    GSS GVR FVE  L+ +AR +P ++ +T++  GHP V  +YVTGYERQ  LKN+S  +V      LR+TLGR VP H ++ +GV   R  S+QG+W   A     PP   E              D+++++ G+ G +++   L   +E  R
Sbjct:    1 MARRGVFELRQVLLRYELAGGSSAGVRSFVEADLIPWARDHPFVRVETQVHRGHPNVIGQYVTGYERQLGLKNLSRVDVAARFAYLRNTLGRVVPLHRRVRSGVTSSRNRSIQGMWHTPAGDPRVPPLPVEVAARARVAAVGLDADTLVQELGLEGFLRLLDRLAAEKEAAR 172          
BLAST of Gchil1718.t1 vs. uniprot
Match: A0A5J4YV13_PORPP (54S ribosomal protein L51, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YV13_PORPP)

HSP 1 Score: 110 bits (276), Expect = 6.110e-27
Identity = 58/130 (44.62%), Postives = 80/130 (61.54%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVRDFVEHGLVSFARKNPHIQFQTEIK-GGHPCVFCKYVTGYERQRTLKNISAEEVGETLQLLRDTLGRRVPAHNQLGTGVVEKRAVSVQGVWRN-RADLNPPETA 128
            MAR GVW+L  VL+RYC N GSSRGVRD++   LV +A+ NP    +T+++ G HP V   Y   Y R   LKN+  E+V E L  LR+TLG +VP H ++  G+ E   +   G+ R+ RAD++ P  A
Sbjct:    1 MARRGVWDLERVLIRYCTNGGSSRGVRDYIRMELVDWAKANPSFNIETKVRIGAHPRVLGVYRNRYMRVLNLKNMDLEQVKEQLAYLRNTLGHKVPRHKRIIKGIFESDGIIHTGMQRSVRADVDNPALA 130          
BLAST of Gchil1718.t1 vs. uniprot
Match: A0A7S1CP68_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CP68_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.050e-23
Identity = 55/117 (47.01%), Postives = 69/117 (58.97%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVRDFVEHGLVSFARKNPHIQFQTEIKGG-HPCVFCKYVTGYERQRTLKNISAEEVGETLQLLRDTLGRRVPAHNQLGTGVVEKRAVSVQGVW 116
            M   GVW+L+E+ LRYC +SGSS GVR+F+  GLV FAR NP +  +T ++   HP     Y+ G  +   LKN  AE VG  LQ LRD  GR+V  H+      V   A SVQGVW
Sbjct:    9 MCTRGVWQLKELTLRYCRSSGSSAGVREFMRDGLVEFARTNPQLTVRTVVRPNRHPNAIGDYLNGNTKVTDLKNKDAEAVGAVLQRLRDDGGRKVQRHHV----PVRSSAPSVQGVW 121          
BLAST of Gchil1718.t1 vs. uniprot
Match: A0A024G7B8_9STRA (L51_S25_CI-B8 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G7B8_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.850e-19
Identity = 50/128 (39.06%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVRDFVEHG-LVSFARKNPHIQFQTEIKGG-HPCVFCKYVTGYERQRTLKNISAEEVGETLQLLRDTLGRRVPAHNQLGTGVVEKRAVSVQGVWRNRADLNPPE 126
            MA  G+W+L+EV +RYC +SGSSR VRDF+ +   + F ++NP + F+TE+K G HP +   YVT  ++   +KN   + +   LQ LRD+ GR++    ++   V+ K   S+QG+W+   D+  PE
Sbjct:    1 MATRGIWQLKEVTIRYCQHSGSSRHVRDFLSNKQFLEFVKENPQVSFRTELKPGRHPVLIGDYVTNQQKVCDVKNKEQKVIMLQLQRLRDSSGRKM---TKMKRPVITK-CPSIQGIWQQ--DMQFPE 122          
BLAST of Gchil1718.t1 vs. uniprot
Match: F0WUQ8_9STRA (Uncharacterized protein AlNc14C277G10065 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WUQ8_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.850e-19
Identity = 48/128 (37.50%), Postives = 80/128 (62.50%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVRDFVEHG-LVSFARKNPHIQFQTEIKGG-HPCVFCKYVTGYERQRTLKNISAEEVGETLQLLRDTLGRRVPAHNQLGTGVVEKRAVSVQGVWRNRADLNPPE 126
            MA  G+W+L+E+ +RYC +SGSSR +RDF+ +   + F ++NP + F+TE+K G HP +   YVT  ++   +KN   + +   LQ LRD+ GR++    ++   ++ KR  S+QG+W+   D+  PE
Sbjct:    1 MATRGIWQLKELTIRYCQHSGSSRYIRDFLNNKKFIDFVKENPQVAFRTELKPGRHPVLIGDYVTNEQKVCDVKNKEEKWIMLQLQRLRDSSGRKM---TRMKRPIISKRP-SIQGIWQQ--DMRFPE 122          
BLAST of Gchil1718.t1 vs. uniprot
Match: A0A0P1AJE9_PLAHL (Mitochondrial/chloroplast ribosomal protein 36a n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJE9_PLAHL)

HSP 1 Score: 87.4 bits (215), Expect = 7.510e-19
Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVRDFV-EHGLVSFARKNPHIQFQTEIKGG-HPCVFCKYVTGYERQRTLKNISAEEVGETLQLLRDTLGRRVPAHNQLGTGVVEKRAVSVQGVWRNRADLNPPE 126
            MA  GVW+L++V +RYC +SGSSR VR  + +     F  +NP + F+TE+KG  HP +  +YVT   +   +KN     + + LQ LRD+ GR++     +   V+ KR +SVQG+W+    LN PE
Sbjct:    1 MATKGVWQLKQVTIRYCQHSGSSRYVRQLLSDDRFHKFVEENPQVHFKTELKGARHPILVGEYVTNQRKVSDIKNQDINFIMKQLQRLRDSSGRKM---THIKKPVISKR-ISVQGIWQ--PTLNFPE 122          
BLAST of Gchil1718.t1 vs. uniprot
Match: A0A225WRY3_9STRA (L51_S25_CI-B8 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WRY3_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.170e-17
Identity = 47/128 (36.72%), Postives = 76/128 (59.38%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVRDFV-EHGLVSFARKNPHIQFQTEIKGG-HPCVFCKYVTGYERQRTLKNISAEEVGETLQLLRDTLGRRVPAHNQLGTGVVEKRAVSVQGVWRNRADLNPPE 126
            MA  GVW+L++V +RYC + GSSR VR  + +   + F  +NP +QF+TE+KG  HP +   YVT   +   +KN     + + L+ LR++ GR++     +   V+ KR  ++QG+W+   DL+ PE
Sbjct:    1 MATRGVWQLKQVTIRYCQHGGSSRYVRQLLGDERFIKFVEENPQVQFETELKGARHPVLIGDYVTNERKVSDIKNQDVPFIMKQLERLRNSSGRKM---THIKKPVITKRQ-TIQGIWQ--PDLDFPE 122          
BLAST of Gchil1718.t1 vs. uniprot
Match: A0A5A8CBI6_CAFRO (L51_S25_CI-B8 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CBI6_CAFRO)

HSP 1 Score: 83.2 bits (204), Expect = 3.020e-17
Identity = 44/117 (37.61%), Postives = 66/117 (56.41%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVRDFVEHGLVSFARKNPHIQFQTEIKGGHPCVFC-KYVTGYERQRTLKNISAEEVGETLQLLRDTLGRRVPAHNQLGTGVVEKRAVSVQGVW 116
            M   GVW+L+++ +R+CA+SG S G R+F+   L +FA  NP ++   E +   P +   KYV G ERQ  + N+SA EV      LRD  GR+V    +     V+  + S+QG+W
Sbjct:    1 MCSKGVWQLKQLTVRFCAHSGGSAGTREFLRTELAAFAEANPQLEVAAEGRSNRPALLRGKYVCGSERQVEVSNMSASEVLAAASALRDQTGRKVTRVREN----VKSSSPSIQGMW 113          
The following BLAST results are available for this feature:
BLAST of Gchil1718.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IW20_9FLOR1.180e-9572.1954S ribosomal protein L51, mitochondrial n=1 Tax=G... [more]
R7QME5_CHOCR4.820e-7459.36L51_S25_CI-B8 domain-containing protein n=1 Tax=Ch... [more]
A0A1X6P6K6_PORUM7.780e-3440.70L51_S25_CI-B8 domain-containing protein n=1 Tax=Po... [more]
A0A5J4YV13_PORPP6.110e-2744.6254S ribosomal protein L51, mitochondrial n=1 Tax=P... [more]
A0A7S1CP68_9STRA1.050e-2347.01Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A024G7B8_9STRA1.850e-1939.06L51_S25_CI-B8 domain-containing protein n=1 Tax=Al... [more]
F0WUQ8_9STRA1.850e-1937.50Uncharacterized protein AlNc14C277G10065 n=1 Tax=A... [more]
A0A0P1AJE9_PLAHL7.510e-1939.84Mitochondrial/chloroplast ribosomal protein 36a n=... [more]
A0A225WRY3_9STRA1.170e-1736.72L51_S25_CI-B8 domain-containing protein n=1 Tax=Ph... [more]
A0A5A8CBI6_CAFRO3.020e-1737.61L51_S25_CI-B8 domain-containing protein n=2 Tax=Ca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 18..90
e-value: 6.2E-18
score: 75.6
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 26..73
e-value: 5.8E-8
score: 32.5
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..143
e-value: 8.5E-33
score: 115.2
IPR03992739S ribosomal protein L43/54S ribosomal protein L51PANTHERPTHR2139639S RIBOSOMAL PROTEIN L43coord: 1..118
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 9..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1974297..1974989 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1718.t1Gchil1718.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1974297..1974989 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1718.t1 ID=Gchil1718.t1|Name=Gchil1718.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=188bp
MARNGVWELREVLLRYCANSGSSRGVRDFVEHGLVSFARKNPHIQFQTEI
KGGHPCVFCKYVTGYERQRTLKNISAEEVGETLQLLRDTLGRRVPAHNQL
GTGVVEKRAVSVQGVWRNRADLNPPETAETLELREKRRQEYSVDSIIEKY
GVTGLVKITQSLLENRERMRLAALAAMPKKERVMPTE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007741Ribosome/NADH_DH
IPR039927MRPL43/MRPL51
IPR036249Thioredoxin-like_sf