Gchil1709.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1709.t1
Unique NameGchil1709.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length88
Homology
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BLAST of Gchil1709.t1 vs. uniprot
Match: A0A2V3IW08_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW08_9FLOR)

HSP 1 Score: 89.4 bits (220), Expect = 1.230e-21
Identity = 58/87 (66.67%), Postives = 61/87 (70.11%), Query Frame = 0 
Query:    1 MTLCPYKWFLYIASVWAVLYVMVEAWMHMRNATKQVDEYQQQTELEXXXXXXXXXXXXXXXXXESRDVAYEPLLMRASLSTSLVSTR 87
            MTLCPYKWFLYIASVWAVLYVM+E WMHMR ATK VD      E E  XXXXXXXX       ES  V +EPL MR SL TSL+S R
Sbjct:    1 MTLCPYKWFLYIASVWAVLYVMLETWMHMRAATKAVDPQSSYVEDEEDXXXXXXXX-------ESHSVIHEPLHMRRSLQTSLLSNR 80
The following BLAST results are available for this feature:
BLAST of Gchil1709.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IW08_9FLOR1.230e-2166.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 10..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1943383..1943646 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1709.t1Gchil1709.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1943383..1943646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1709.t1 ID=Gchil1709.t1|Name=Gchil1709.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=88bp
MTLCPYKWFLYIASVWAVLYVMVEAWMHMRNATKQVDEYQQQTELEDDDD
SDEEEEEEEEEEKESRDVAYEPLLMRASLSTSLVSTR*
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