Gchil1702.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1702.t1
Unique NameGchil1702.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length197
Homology
BLAST of Gchil1702.t1 vs. uniprot
Match: A0A2V3IYP9_9FLOR (Nudix hydrolase 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYP9_9FLOR)

HSP 1 Score: 296 bits (759), Expect = 3.520e-100
Identity = 135/192 (70.31%), Postives = 164/192 (85.42%), Query Frame = 0
Query:    5 SSEEHFDVLNEKGSPLGFSKARSLVHRDGDWHRSTHVWLLSTRGEVLVQMRSALKDTFPGRWDVSAAGHISAGGDSLPSAIRELEEELGIHLQEGEEVEFLTSVKASATGRTDRHGPYVDNEIQDIYVYRPKETVPPNRMILQREEVDKVEYWPWSEYRERCLNNDEILVPRSEMYKQKAFPMLEEAIAKSS 196
            S+EEHFDVLNE GSP GF+KARSLVHRDGDWHRSTH+W+ S  GEVLVQ+R+A KDTFPGRWDVSAAGHISAG +SLPSA RELEEELG+ L++ E +  LT+VKASA G T +HGPY DNEIQDIYVY+PK T+P + M+LQ +EVD+VEYWPW +YRERC+ +D++LVPRS MYKQ AFP+L++  + S+
Sbjct:    9 STEEHFDVLNEDGSPKGFAKARSLVHRDGDWHRSTHIWVFSNEGEVLVQLRAAGKDTFPGRWDVSAAGHISAGDNSLPSATRELEEELGVKLEDSENLHLLTTVKASAVGSTKKHGPYKDNEIQDIYVYKPKTTIPVDLMVLQSDEVDRVEYWPWQDYRERCMGDDQLLVPRSPMYKQIAFPLLDKVASGST 200          
BLAST of Gchil1702.t1 vs. uniprot
Match: A0A7S0ZG27_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZG27_9RHOD)

HSP 1 Score: 172 bits (436), Expect = 6.000e-51
Identity = 93/194 (47.94%), Postives = 125/194 (64.43%), Query Frame = 0
Query:    4 TSSEEHFDVLNEKGSPLGFSKARSLVHRDGD---WHRSTHVWLLS---TRGEV--LVQMRSALKDTFPGRWDVSAAGHISAGGDSLPSAIRELEEELGIHLQEGEEVEFLTSVKASATGRTDRHGPYVDNEIQDIYVYRPKETVPPNRMILQREEVDKVEYWPWSEYRERCLNNDEILVPRSEMYKQKAFPMLE 189
            + +EE FD+LNE GS LG SK RSLVHRDGD   WHRS H+WL S   T  E+  L+QMRS  KDTFP  WDVS+AGH+ +G  S  +AIRELEEELG+ + E + +EF+ SVK+S  G +   G ++DNEIQD+Y          + + LQ  EV  V+Y P +EY+    + ++  VPR + Y+++ F  LE
Sbjct:   12 SDNEEKFDLLNEDGSMLGVSKRRSLVHRDGDCGDWHRSVHIWLFSVDKTSKEISILLQMRSPGKDTFPNCWDVSSAGHVGSGDVSFSTAIRELEEELGLSVNENQ-LEFVFSVKSSNRGYSPAQGAFIDNEIQDVYALYTPTQYDKSDLKLQESEVSNVKYIPLAEYKSALQSKNDSYVPRPDAYQEQLFEFLE 204          
BLAST of Gchil1702.t1 vs. uniprot
Match: A0A5J4YWH2_PORPP (Nudix hydrolase 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWH2_PORPP)

HSP 1 Score: 159 bits (401), Expect = 1.130e-45
Identity = 84/203 (41.38%), Postives = 119/203 (58.62%), Query Frame = 0
Query:    7 EEHFDVLNEKGSPLGFSKARSLVHRDGDWHRSTHVWLLSTR-GEVLVQMRSALKDTFPGRWDVSAAGHISAGGDSLPSAIRELEEELGIHLQE------------------GEEVEFLTSVKASATGRTDRHGPYVDNEIQDIYVYRPKETVPPNRMILQREEVDKVEYWPWSEYRERCLNNDEILVPRSEMYKQKAFPMLEE 190
            EE FDVLN  GSP      RS+VH +G WHRS HVW++  + G +L+QMR+  KDTFP R DVSAAGHI+AG  S  +A+RELEEELG+ L +                   + +  L + ++   G T  HG +VD E+QD+Y+   +E +  +++ LQ+ EV  V + PW++YR+     DE  VPR   Y ++ F +L E
Sbjct:    3 EEEFDVLNRDGSPALQRLPRSVVHAEGHWHRSVHVWIVDEKEGTLLLQMRAPDKDTFPNRLDVSAAGHIAAGEGSWDTALRELEEELGVELDDRGASVKVYSREESALLHVAQPLRLLFTAESENQGETPAHGKFVDRELQDVYLLVTREALDLSKLKLQQSEVLGVRFLPWTQYRDALCAGDEAFVPRPAEYARRFFKILHE 205          
BLAST of Gchil1702.t1 vs. uniprot
Match: UPI0006AB5BE7 (nudix hydrolase 3-like n=1 Tax=Brassica napus TaxID=3708 RepID=UPI0006AB5BE7)

HSP 1 Score: 149 bits (377), Expect = 1.320e-39
Identity = 77/171 (45.03%), Postives = 107/171 (62.57%), Query Frame = 0
Query:    6 SEEHFDVLNEKGSPLGFSKARSLVHRDGDWHRSTHVWL-LSTRGEVLVQMRSALKDTFPGRWDVSAAGHISAGGDSLPSAIRELEEELGIHLQEGEEVEFLTSVKASATGRTDRHGPYVDNEIQDIYVYRPKETVPPNRMILQREEVDKVEYWPWSEYRERCLNNDEILVP 175
            +EEHFDVL + G   G SK RS +HRDGD+HR+ HVW+ + +  E+L+Q+RS  KD++PG+WD+S+AGHISAG  SL SA RELEEELGI L      +    ++   T     +G +++NE  D+Y+      +P +   LQ+EEV  V+Y P+ EYR      D   VP
Sbjct:    2 AEEHFDVLTKSGEKTGVSKPRSEIHRDGDYHRAVHVWIFVESTQELLLQLRSDDKDSWPGQWDISSAGHISAGDPSLLSAQRELEEELGIKLPTDAFEKIFVFLQECVTN----NGKFINNEFNDVYLVTVLHPIPLDAFTLQKEEVSAVKYIPYEEYRNLLAKEDPAYVP 168          
BLAST of Gchil1702.t1 vs. uniprot
Match: A0A1J3D7B6_NOCCA (Nudix hydrolase 3 n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D7B6_NOCCA)

HSP 1 Score: 141 bits (356), Expect = 1.120e-38
Identity = 72/171 (42.11%), Postives = 104/171 (60.82%), Query Frame = 0
Query:    6 SEEHFDVLNEKGSPLGFSKARSLVHRDGDWHRSTHVWL-LSTRGEVLVQMRSALKDTFPGRWDVSAAGHISAGGDSLPSAIRELEEELGIHLQEGEEVEFLTSVKASATGRTDRHGPYVDNEIQDIYVYRPKETVPPNRMILQREEVDKVEYWPWSEYRERCLNNDEILVP 175
            +EEHFDVL + G   G +K R  +HRDGD+HR+ HVW+ + +  E+L+Q+RS  KD++PG+WD+S+AGHISAG  SL SA REL+EELG+ L +    +    ++   T      G +++NE  D+Y+      +P     LQ EEV  V+Y P+ +YR      D   VP
Sbjct:   18 AEEHFDVLTKSGEKTGVTKPRGEIHRDGDYHRAVHVWIFVESTQELLLQLRSDDKDSWPGQWDISSAGHISAGDPSLVSAQRELQEELGVKLPKDAFEKIFVFLQECVTN----DGKFINNEFNDVYLVTILHPIPLEAFTLQVEEVSAVKYIPYQDYRNFLAKEDPAYVP 184          
BLAST of Gchil1702.t1 vs. uniprot
Match: A0A0D3CVR6_BRAOL (Nudix hydrolase domain-containing protein n=26 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3CVR6_BRAOL)

HSP 1 Score: 149 bits (375), Expect = 4.230e-38
Identity = 75/171 (43.86%), Postives = 108/171 (63.16%), Query Frame = 0
Query:    6 SEEHFDVLNEKGSPLGFSKARSLVHRDGDWHRSTHVWL-LSTRGEVLVQMRSALKDTFPGRWDVSAAGHISAGGDSLPSAIRELEEELGIHLQEGEEVEFLTSVKASATGRTDRHGPYVDNEIQDIYVYRPKETVPPNRMILQREEVDKVEYWPWSEYRERCLNNDEILVP 175
            +EEHFDVL + G   G SK RS +HRDGD+HR+ HVW+ + +  E+L+Q+RS  KD++PG+WD+S+AGHISAG  S+ SA RE+EEELGI L +    +    ++   T     +G +++NE  D+Y+      +P +   LQ+EEV  V+Y P+ EYR      D   VP
Sbjct:    2 AEEHFDVLTKSGEKTGVSKPRSEIHRDGDYHRAVHVWIFVESTQELLLQLRSDDKDSWPGQWDISSAGHISAGDPSIISAQREMEEELGIKLPKDAFEKIFVFLQECVTN----NGKFINNEFNDVYLVTVLHPIPLDAFTLQKEEVSAVKYIPYEEYRNLLAKEDPAYVP 168          
BLAST of Gchil1702.t1 vs. uniprot
Match: A0A5B8MII3_9CHLO (NUDIX hydrolase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MII3_9CHLO)

HSP 1 Score: 139 bits (349), Expect = 4.890e-38
Identity = 77/170 (45.29%), Postives = 109/170 (64.12%), Query Frame = 0
Query:    4 TSSEEHFDVLNEKGSPLGFSKARSLVHRDGDWHRSTHVWLLS-TRGEVLVQMRSALKDTFPGRWDVSAAGHISAGGDSLPSAIRELEEELGIHLQEGEEVEFLTSVKASATGRTDRHGP-YVDNEIQDIYVYRPKETVPPNRMILQREEVDKVEYWPWSEYRERCLNNDE 171
            T+ EE FD+++EK  PLG +KARSLVHRDGDWH++ HVW++     EV++Q R   KD++PG WD+S+AGHISAGG+ L SA RE+EEELG+ L + E   +L   K    G+   HG  +V+NE   +Y+   KE +P     LQ+EEV  +++    E  E+    D+
Sbjct:    8 TAREELFDLVDEKCKPLGITKARSLVHRDGDWHQAVHVWVMIWDTWEVVMQQRVLEKDSWPGMWDISSAGHISAGGEPLESAQREVEEELGLKLPK-EAFRYLFLHKQEFEGKF--HGKKFVNNEFNHVYLVTLKERLPREAFKLQKEEVRDMKFIGLQELGEKIKRGDK 174          
BLAST of Gchil1702.t1 vs. uniprot
Match: UPI000E6FEA66 (nudix hydrolase 3-like n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FEA66)

HSP 1 Score: 142 bits (359), Expect = 8.270e-38
Identity = 76/171 (44.44%), Postives = 104/171 (60.82%), Query Frame = 0
Query:    7 EEHFDVLNEKGSPLGFSKARSLVHRDGDWHRSTHVWLLS-TRGEVLVQMRSALKDTFPGRWDVSAAGHISAGGDSLPSAIRELEEELGIHL-QEGEEVEFLTSVKASATGRTDRHGPYVDNEIQDIYVYRPKETVPPNRMILQREEVDKVEYWPWSEYRERCLNNDEILVP 175
            EEHFDVL + G   G +K RS VHRDGD+HR+ HVW+ + T GE+LVQ R+  KD++PG WD+S+AGHISAG  SL SA REL+EELG+ L  +  E+ F+   +A        +G +++NE  D+Y+    + +P     LQ  EV  V+Y  W EY+      D    P
Sbjct:    5 EEHFDVLTKTGEKTGITKPRSHVHRDGDYHRAVHVWIYAETTGELLVQRRADNKDSYPGLWDISSAGHISAGDSSLISARRELQEELGVTLPNDAFELIFVFLHEA-----VTNNGNFINNEFNDVYLVTTIDPIPLEAFTLQETEVSAVKYIKWEEYKSLLAKEDPDYCP 170          
BLAST of Gchil1702.t1 vs. uniprot
Match: A0A847NT70_9MOLU (NUDIX domain-containing protein n=1 Tax=Mollicutes bacterium TaxID=37628 RepID=A0A847NT70_9MOLU)

HSP 1 Score: 137 bits (344), Expect = 1.900e-37
Identity = 68/185 (36.76%), Postives = 120/185 (64.86%), Query Frame = 0
Query:    6 SEEHFDVLNEKGSPLGFSKARSLVHRDGDWHRSTHVWLLSTRGEVLVQMRSALKDTFPGRWDVSAAGHISAGGDSLPSAIRELEEELGIHLQEGEEVEFLTSVKASATGRTDRHGPYVDNEIQDIYVYRPKETVPPNRMILQREEVDKVEYWPWSEYRERCLNNDEILVPRSEMYKQKAFPMLEE 190
            S+E+FD+L+E G+  G +K RS VHRDGDWH++ H+W+L++ G+VL+Q R A KD+ P   D+S+AGH+SAG DSL  AIREL+EEL + ++  E+++F+ ++K S+         +++NE  D+Y+    +++   R   Q  E+ ++ + P+ +++E  +N    L+  ++ + +  F M +E
Sbjct:    2 SKEYFDILDENGNKTGKTKLRSEVHRDGDWHKAVHIWILNSNGDVLLQRRCATKDSNPNMLDISSAGHLSAGDDSLTGAIRELKEELNLDVKP-EDLQFIKTLKRSSKYTET----FINNEFDDLYILITDKSIEDMRY--QESEISEIFFVPYKKFKEMVINEQPDLLRHNDEF-EIIFNMFDE 178          
BLAST of Gchil1702.t1 vs. uniprot
Match: NUDT3_ARATH (Nudix hydrolase 3 n=8 Tax=Camelineae TaxID=980083 RepID=NUDT3_ARATH)

HSP 1 Score: 147 bits (370), Expect = 2.020e-37
Identity = 76/171 (44.44%), Postives = 105/171 (61.40%), Query Frame = 0
Query:    6 SEEHFDVLNEKGSPLGFSKARSLVHRDGDWHRSTHVWL-LSTRGEVLVQMRSALKDTFPGRWDVSAAGHISAGGDSLPSAIRELEEELGIHLQEGEEVEFLTSVKASATGRTDRHGPYVDNEIQDIYVYRPKETVPPNRMILQREEVDKVEYWPWSEYRERCLNNDEILVP 175
            +EEHFDVL + G   G SK R  VHRDGD+HR+ HVW+ + T  ++L+Q+RS  KD++PG+WD+S+AGHISAG  SL SA RELEEELG+ L +    +    ++   T      G +++NE  D+Y+      +P     LQ+EEV  V+Y P+ EYR      D   VP
Sbjct:    2 AEEHFDVLTKSGEKTGVSKPRGEVHRDGDYHRAVHVWIFVETTQQLLLQLRSDDKDSWPGQWDISSAGHISAGDTSLLSAQRELEEELGVKLPKDAFEKIFVFLQECVTN----DGKFINNEFNDVYLVTILHPIPLEAFTLQKEEVSAVKYVPYEEYRNFLSKEDPAYVP 168          
The following BLAST results are available for this feature:
BLAST of Gchil1702.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYP9_9FLOR3.520e-10070.31Nudix hydrolase 3 n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A7S0ZG27_9RHOD6.000e-5147.94Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YWH2_PORPP1.130e-4541.38Nudix hydrolase 3 n=1 Tax=Porphyridium purpureum T... [more]
UPI0006AB5BE71.320e-3945.03nudix hydrolase 3-like n=1 Tax=Brassica napus TaxI... [more]
A0A1J3D7B6_NOCCA1.120e-3842.11Nudix hydrolase 3 n=2 Tax=Noccaea caerulescens Tax... [more]
A0A0D3CVR6_BRAOL4.230e-3843.86Nudix hydrolase domain-containing protein n=26 Tax... [more]
A0A5B8MII3_9CHLO4.890e-3845.29NUDIX hydrolase n=2 Tax=Chloropicon primus TaxID=1... [more]
UPI000E6FEA668.270e-3844.44nudix hydrolase 3-like n=1 Tax=Papaver somniferum ... [more]
A0A847NT70_9MOLU1.900e-3736.76NUDIX domain-containing protein n=1 Tax=Mollicutes... [more]
NUDT3_ARATH2.020e-3744.44Nudix hydrolase 3 n=8 Tax=Camelineae TaxID=980083 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 36..162
e-value: 3.7E-16
score: 59.3
IPR000086NUDIX hydrolase domainPROSITEPS51462NUDIXcoord: 34..179
score: 16.00812
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 4..194
e-value: 1.3E-39
score: 138.1
NoneNo IPR availablePIRSRPIRSR017340-1PIRSR017340-1coord: 4..98
e-value: 9.5E-22
score: 75.6
NoneNo IPR availablePANTHERPTHR10885:SF11ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASEcoord: 4..174
NoneNo IPR availablePANTHERPTHR10885ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASEcoord: 4..174
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 8..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1838159..1838839 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1702.t1Gchil1702.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1838159..1838839 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1702.t1 ID=Gchil1702.t1|Name=Gchil1702.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=197bp
MAHTSSEEHFDVLNEKGSPLGFSKARSLVHRDGDWHRSTHVWLLSTRGEV
LVQMRSALKDTFPGRWDVSAAGHISAGGDSLPSAIRELEEELGIHLQEGE
EVEFLTSVKASATGRTDRHGPYVDNEIQDIYVYRPKETVPPNRMILQREE
VDKVEYWPWSEYRERCLNNDEILVPRSEMYKQKAFPMLEEAIAKSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase-like_dom_sf