Gchil1698.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1698.t1
Unique NameGchil1698.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length203
Homology
BLAST of Gchil1698.t1 vs. uniprot
Match: A0A2V3IVZ9_9FLOR (Transmembrane emp24 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVZ9_9FLOR)

HSP 1 Score: 373 bits (958), Expect = 5.760e-130
Identity = 180/202 (89.11%), Postives = 193/202 (95.54%), Query Frame = 0
Query:    1 MKSSFLFGSILLAIVLCARPVSALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVNLHVNAPSGREIQKFDAQSEGRVDFVATEDGEHSFCFKNAYTETEVSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARIDLEAFKAREHHHRETADKNRRRVTLWAVIECVLILAVAGVQIMRIRNFFEHKRMV 202
            MK+S +F  ILLA+ LC+ P SALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYV LHVNAPSGREIQKF+AQSEGRV+FVATEDGEHSFCFKNAYTETEVSFW+NTETDSALSDVA+EEHVNDMVYSVEKLNSLVSAAR+DLEAFKAREHHHR+TADKNRRRVT WA++EC+LIL VAGVQIMRIRNFFEHKRMV
Sbjct:   27 MKASHIFTLILLALSLCSTPSSALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEFVATEDGEHSFCFKNAYTETEVSFWINTETDSALSDVAKEEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRDTADKNRRRVTFWAIVECLLILGVAGVQIMRIRNFFEHKRMV 228          
BLAST of Gchil1698.t1 vs. uniprot
Match: R7QQB3_CHOCR (Member of emp24/gp25L/p24 family/GOLD family n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQB3_CHOCR)

HSP 1 Score: 336 bits (862), Expect = 9.790e-116
Identity = 163/192 (84.90%), Postives = 180/192 (93.75%), Query Frame = 0
Query:   12 LAIVLCARPVS-ALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVNLHVNAPSGREIQKFDAQSEGRVDFVATEDGEHSFCFKNAYTETEVSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARIDLEAFKAREHHHRETADKNRRRVTLWAVIECVLILAVAGVQIMRIRNFFEHKRMV 202
            LA+VL     S ALNFKI+PKETLCFHEITHKGNKVLAFFDVLSWGYGAYV LHV +PSGREI+K++A+SEGRV+F+ATEDGEH+FCFKNA TETEVSFW+NTE+DSALSDVA+EEHVNDMVYSVEKLNSLVSAAR+DLEAFKAREHHHR+TADKNRRRVT WA +EC LILAVAGVQIMRIRNFFE+KRMV
Sbjct:   11 LALVLAGFSSSDALNFKIAPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVYLHVTSPSGREIKKYEAESEGRVEFIATEDGEHNFCFKNAQTETEVSFWINTESDSALSDVAKEEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRKTADKNRRRVTFWAFVECFLILAVAGVQIMRIRNFFEYKRMV 202          
BLAST of Gchil1698.t1 vs. uniprot
Match: A0A1X6NKS8_PORUM (GOLD domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKS8_PORUM)

HSP 1 Score: 287 bits (735), Expect = 3.360e-96
Identity = 132/180 (73.33%), Postives = 159/180 (88.33%), Query Frame = 0
Query:   23 ALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVNLHVNAPSGREIQKFDAQSEGRVDFVATEDGEHSFCFKNAYTETEVSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARIDLEAFKAREHHHRETADKNRRRVTLWAVIECVLILAVAGVQIMRIRNFFEHKRMV 202
            ALNFKI PK+ LCFHEITHKGNKVLAFFDV+SWGYGAYV L V APSG+++Q F ++SEGRVDF A EDGE +FCFKNAY+ETEVSFW+NTETD  L+DVA+EEHV+D+VYSVE+LNS+V+AA++DLE+FK+RE  HR+TA  NRRRVT WAV EC+L+LAVA  Q++RIRNFFE KR+V
Sbjct:   36 ALNFKIQPKDELCFHEITHKGNKVLAFFDVVSWGYGAYVTLEVTAPSGKQLQSFVSESEGRVDFTAAEDGEFNFCFKNAYSETEVSFWINTETDVGLADVAKEEHVSDLVYSVERLNSMVNAAKVDLESFKSREARHRQTAHSNRRRVTFWAVTECLLVLAVAVAQVVRIRNFFEFKRIV 215          
BLAST of Gchil1698.t1 vs. uniprot
Match: A0A7S0XJF6_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XJF6_9RHOD)

HSP 1 Score: 261 bits (668), Expect = 5.240e-86
Identity = 126/189 (66.67%), Postives = 149/189 (78.84%), Query Frame = 0
Query:   14 IVLCARPVSALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVNLHVNAPSGREIQKFDAQSEGRVDFVATEDGEHSFCFKNAYTETEVSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARIDLEAFKAREHHHRETADKNRRRVTLWAVIECVLILAVAGVQIMRIRNFFEHKRMV 202
            +VL  R    L+F+++  + LCFHEITHK NKVLAFFDV+SWGYGAYV + V  P+   I+ FDA+SEGRV+F A  DGE+SFCF N YT TEVSFWVN E D  L+DV +EEHVNDMVYSVE+LNSLVSAA+IDL +FKARE  HR+TA+ NRRRVT WA IECVLI+ VAGVQI RIR  FE+KR +
Sbjct:   27 VVLSVREADGLSFELTAGKELCFHEITHKSNKVLAFFDVVSWGYGAYVYVKVKDPNLNVIKSFDAESEGRVEFTAEADGEYSFCFHNPYTATEVSFWVNIENDFGLADVIKEEHVNDMVYSVERLNSLVSAAKIDLSSFKAREARHRQTAESNRRRVTAWAAIECVLIVLVAGVQIYRIRKLFENKRSI 215          
BLAST of Gchil1698.t1 vs. uniprot
Match: A0A5J4Z3J5_PORPP (Transmembrane emp24 domain-containing protein p24beta3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3J5_PORPP)

HSP 1 Score: 254 bits (649), Expect = 3.000e-83
Identity = 120/183 (65.57%), Postives = 149/183 (81.42%), Query Frame = 0
Query:   19 RPVSALNFKISP-KETLCFHEITHKGNKVLAFFDVLSWGYGAYVNLHVNAPSGREIQKFDAQSEGRVDFVATEDGEHSFCFKNAYTETEVSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARIDLEAFKAREHHHRETADKNRRRVTLWAVIECVLILAVAGVQIMRIRNFFEHKR 200
            R VS L+F I P ++ LCF+E+THK NKVLAFFDV+SWGYGAYV L V +P G  I+KF+A+SEGR+DFVA EDGE++FCF N+Y  TEVSFWVN E D  LS V +EEHVNDMVY+VE+LNSLVSAA+IDL +FKARE  HR+TA+ NRRRV  W+++EC LI+AVA  Q++RIR  FE++R
Sbjct:   22 RVVSGLSFSIEPGQKPLCFYELTHKQNKVLAFFDVVSWGYGAYVYLEVKSPRGMIIKKFEAESEGRIDFVAEEDGEYTFCFSNSYAATEVSFWVNIENDFGLSQVIKEEHVNDMVYAVERLNSLVSAAKIDLASFKAREARHRKTAESNRRRVMYWSLVECALIVAVAAAQVVRIRKLFENRR 204          
BLAST of Gchil1698.t1 vs. uniprot
Match: A0A136J6H6_9PEZI (Emp24/gp25L/p24 family/GOLD n=2 Tax=Microdochium TaxID=67608 RepID=A0A136J6H6_9PEZI)

HSP 1 Score: 98.6 bits (244), Expect = 4.220e-22
Identity = 63/208 (30.29%), Postives = 105/208 (50.48%), Query Frame = 0
Query:    1 MKSSFLFGSI-LLAIVLCARPVSALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVNLHVNAPSGREIQKFDAQSEGRVDFVATEDGEHSFCFKN---AYTETEVSFWVNTETDSALSDVARE----EHVNDMVYSVEKLNSLVSAARIDLEAFKAREHHHRETADKNRRRVTLWAVIECVLILAVAGVQIMRIRNFFEHKR 200
            MK SF   S+ LLA ++ A   +AL +K+SP E  CF+  T K    +AF+  +  G    VN  V  P GR I   + + +G   F A + GE+ FCF N    YTE  V F +  E +      A++    E    +  S+ K++  +S      + F+ RE+ +  T      R+  +++I+C++++A+ G+Q+  +R FF+  R
Sbjct:    1 MKPSF--ASVGLLAWLVSAVSATALTYKLSPHEEACFYASTEKTGTKMAFYFAVQSGGSFDVNYEVTGPGGRIILDGEKERQGDFVFTANDAGEYKFCFANDMSTYTEKFVDFEIAVEDEVRAKLPAKQGTSPEQTTQLEESIYKISGQLSTITRSQKYFRTRENRNFATVRSTEGRIFKFSLIQCIMVVAMGGLQVFVVRFFFQGAR 206          
BLAST of Gchil1698.t1 vs. uniprot
Match: A0A6G1I492_9PEZI (GOLD domain-containing protein n=1 Tax=Trichodelitschia bisporula TaxID=703511 RepID=A0A6G1I492_9PEZI)

HSP 1 Score: 92.8 bits (229), Expect = 6.850e-20
Identity = 62/208 (29.81%), Postives = 108/208 (51.92%), Query Frame = 0
Query:    1 MKSSFLFGSILLAIVLCARPVSALNFKISPKETLCFH-EITHKGNKVLAFFDVLSWGYGAYVNLHVNAPSGREIQKFDAQSEGRVDFVATEDGEHSFCFKN---AYTETEVSFWVNTETDSALSDVARE----EHVNDMVYSVEKLNSLVSAARIDLEAFKAREHHHRETADKNRRRVTLWAVIECVLILAVAGVQIMRIRNFFEHKR 200
            M+SS L   I  A+       +AL +K+ P E  CF+ ++T +G KV  +F V S G    V+  V  PS R I +   + +G   F A + GE+ FCF N    + +  V F +  E +S     +++    E  + +  S+ KL+S +S    + + F+ RE+ +  T     RR+  +++IE ++++A+AG+Q+  +R FF+  R
Sbjct:    1 MRSSILAAGIA-ALYAVTASATALTYKLQPNEKSCFYTQVTQRGAKVAFYFAVQSGG-SFDVDYSVVGPSARIIMEGSKERQGDFVFTANDVGEYRFCFNNEMSTFADKTVDFEIAVENESRAQIPSKQGSSPEQTSVLEESIIKLSSQLSTIHRNQKYFRTRENRNFSTVRSTERRIFNFSIIESLMMVAMAGLQVFIVRFFFQGAR 206          
BLAST of Gchil1698.t1 vs. uniprot
Match: A0A2S7QB75_9HELO (Pre-mRNA-processing protein 45 n=1 Tax=Rutstroemia sp. NJR-2017a BBW TaxID=2070414 RepID=A0A2S7QB75_9HELO)

HSP 1 Score: 96.3 bits (238), Expect = 1.410e-19
Identity = 62/207 (29.95%), Postives = 107/207 (51.69%), Query Frame = 0
Query:    1 MKSSFLFGSILLAIVLCARPV---SALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVNLHVNAPSGREIQKFDAQSEGRVDFVATEDGEHSFCFKN---AYTETEVSFWVNTETDSALSDVARE----EHVNDMVYSVEKLNSLVSAARIDLEAFKAREHHHRETADKNRRRVTLWAVIECVLILAVAGVQIMRIRNFFE 197
            MKSS L+GS+L     C  P+   +AL +K+S  E  CF+    K    +AF+  +  G    V+  V  P+ R I K + + +G   F ATE GE+ FCF N    + E  V F +  E +   S  +++    E  + +  S+ KL+  +S    + + F+ RE+ +  T     RR+  +++IE ++++ +AG+Q+  +R FF+
Sbjct:   24 MKSSLLWGSLLA----CLSPLVSATALTYKLSANEKACFYSYVDKPGAKVAFYFAVQAGGSFDVDYEVVGPNERTIMKEEKERQGDFVFTATEVGEYRFCFNNQMSTFAEKFVDFEIAVENEVRASIPSKQGTTPEQTSALEESIFKLSGQLSTITRNQKYFRTRENRNFSTVRSTERRIFNFSIIESLMMICMAGLQVFIVRFFFQ 226          
BLAST of Gchil1698.t1 vs. uniprot
Match: A0A2S4PLH2_9PEZI (Erp2 (Fragment) n=1 Tax=Erysiphe pulchra TaxID=225359 RepID=A0A2S4PLH2_9PEZI)

HSP 1 Score: 89.7 bits (221), Expect = 8.800e-19
Identity = 59/202 (29.21%), Postives = 109/202 (53.96%), Query Frame = 0
Query:    7 FGSILLAIVLCARPVS---ALNFKISPKETLCFHE-ITHKGNKVLAFFDVLSWGYGAYVNLHVNAPSGREIQKFDAQSEGRVDFVATEDGEHSFCFKN---AYTETEVSFWVNTETDSALSDVARE----EHVNDMVYSVEKLNSLVSAARIDLEAFKAREHHHRETADKNRRRVTLWAVIECVLILAVAGVQIMRIRNFFE 197
            F ++L+ +++   P++   AL +KI+  E  CF+  + +KG KV  +F V S G    ++  VN P+ + I     + +G   F A E G++ FCF N    +TE  V F +  E +   + ++++    E  + +  SV KL+S +S    + + F+ RE+ +  T     RR+  ++V+E +LI+ +AG+Q+  +R FF+
Sbjct:    3 FFNVLIGLLIYLAPLTYATALTYKIAGNENACFYATVKNKGAKVAFYFAVQSGG-SFDIDYDVNGPNKKVILTGAKERQGDFVFTANEIGDYEFCFSNRISTFTEKVVDFEIAVENEERAAMISQQNSPPEQTSALEESVIKLSSQLSTIARNQKYFRTRENRNFSTVRSTERRIFNFSVMESLLIICMAGLQVFIVRFFFQ 203          
BLAST of Gchil1698.t1 vs. uniprot
Match: A0A384JMX2_BOTFB (GOLD domain-containing protein n=17 Tax=Helotiales TaxID=5178 RepID=A0A384JMX2_BOTFB)

HSP 1 Score: 87.8 bits (216), Expect = 5.530e-18
Identity = 55/194 (28.35%), Postives = 98/194 (50.52%), Query Frame = 0
Query:   17 CARPV---SALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVNLHVNAPSGREIQKFDAQSEGRVDFVATEDGEHSFCFKN---AYTETEVSFWVNTETDSALSDVARE----EHVNDMVYSVEKLNSLVSAARIDLEAFKAREHHHRETADKNRRRVTLWAVIECVLILAVAGVQIMRIRNFFEHKR 200
            C  P+   +AL +K+S  E  CF+    K    +AF+  +  G    V+  V  P+ R I K + + +G   F ATE GE+ FCF N    ++E  V F +  E +   S  +++    E  + +  S+ KL+  +S    + + F+ RE+ +  T     RR+  ++VIE ++++ +A +Q+  +R FF+  R
Sbjct:   13 CISPLVSATALTYKLSANEKACFYSNVDKQGAKIAFYFAVQAGGSFDVDYEVVGPNERIIMKEEKERQGDFVFTATEVGEYRFCFNNQMSTFSEKFVDFEIAVENEPRASIPSKQGTTPEQTSALEESIFKLSGQLSTITRNQKYFRTRENRNFSTVRSTERRIFNFSVIESLMMMCMAALQVFIVRFFFQGAR 206          
The following BLAST results are available for this feature:
BLAST of Gchil1698.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVZ9_9FLOR5.760e-13089.11Transmembrane emp24 domain-containing protein n=1 ... [more]
R7QQB3_CHOCR9.790e-11684.90Member of emp24/gp25L/p24 family/GOLD family n=1 T... [more]
A0A1X6NKS8_PORUM3.360e-9673.33GOLD domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S0XJF6_9RHOD5.240e-8666.67Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4Z3J5_PORPP3.000e-8365.57Transmembrane emp24 domain-containing protein p24b... [more]
A0A136J6H6_9PEZI4.220e-2230.29Emp24/gp25L/p24 family/GOLD n=2 Tax=Microdochium T... [more]
A0A6G1I492_9PEZI6.850e-2029.81GOLD domain-containing protein n=1 Tax=Trichodelit... [more]
A0A2S7QB75_9HELO1.410e-1929.95Pre-mRNA-processing protein 45 n=1 Tax=Rutstroemia... [more]
A0A2S4PLH2_9PEZI8.800e-1929.21Erp2 (Fragment) n=1 Tax=Erysiphe pulchra TaxID=225... [more]
A0A384JMX2_BOTFB5.530e-1828.35GOLD domain-containing protein n=17 Tax=Helotiales... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 23..197
e-value: 3.5E-38
score: 142.8
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 23..197
e-value: 3.0E-36
score: 125.1
IPR009038GOLD domainPROSITEPS50866GOLDcoord: 33..113
score: 13.775075
NoneNo IPR availablePANTHERPTHR22811:SF31RE49489Pcoord: 9..197
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 191..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..190
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 170..192
IPR015720Transmembrane emp24 domain-containing proteinPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 9..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1825324..1826281 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1698.t1Gchil1698.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1825324..1826281 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1698.t1 ID=Gchil1698.t1|Name=Gchil1698.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=203bp
MKSSFLFGSILLAIVLCARPVSALNFKISPKETLCFHEITHKGNKVLAFF
DVLSWGYGAYVNLHVNAPSGREIQKFDAQSEGRVDFVATEDGEHSFCFKN
AYTETEVSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARIDLE
AFKAREHHHRETADKNRRRVTLWAVIECVLILAVAGVQIMRIRNFFEHKR
MV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom
IPR015720Emp24-like