Gchil1646.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1646.t1
Unique NameGchil1646.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length186
Homology
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BLAST of Gchil1646.t1 vs. uniprot
Match: A0A2V3IFH4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFH4_9FLOR)

HSP 1 Score: 259 bits (661), Expect = 1.260e-85
Identity = 135/188 (71.81%), Postives = 152/188 (80.85%), Query Frame = 0 
Query:    1 MSFLKCCVGADPRPPPENVRPVSSSXXXXXXXXXXX-YATGASGNKKK-MKHPTEVFFDPTKPDGQLSSVTDPPTSNRDHSDPKKKKEHKDRSAHQKESKKAAPANDRAELELPDNNGLTRGQNFMKVEKWLRSSCKHEQIDITPKQITNIEDGPTDAPDAAAEPPSEKDRLP-HAMVNHHPTTNPSR 185
            MSFL+CCVGADPRPPP+NVRPVS+S            Y +  S NKKK MK PTEVFFDPTKPDGQLSSVTDPP SNRD SDPKK+KEHKDRS+ Q+E++K     DR +L+LPDNNGLTRGQNFMKVEKWLRSSCKH+Q+DITPK ITNIEDGPT   D++AEPPSEKDRLP H + NHH +T PSR
Sbjct:    1 MSFLRCCVGADPRPPPDNVRPVSASHRRTNPAAAASAYPSDPSVNKKKKMKLPTEVFFDPTKPDGQLSSVTDPPNSNRDCSDPKKRKEHKDRSSQQREARKHNSTKDRTDLQLPDNNGLTRGQNFMKVEKWLRSSCKHQQVDITPKTITNIEDGPTLNRDSSAEPPSEKDRLPQHPIANHHQSTAPSR 188
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BLAST of Gchil1646.t1 vs. uniprot
Match: R7Q3R2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3R2_CHOCR)

HSP 1 Score: 186 bits (472), Expect = 8.400e-57
Identity = 104/180 (57.78%), Postives = 123/180 (68.33%), Query Frame = 0 
Query:    1 MSFLKCCVGADPRPPPENVRPVSSSXXXXXXXXXXXYA------TGASGNKKKMKHPTEVFFDPTKPDGQLSSVTDPPTSNRDHSDPKKKKEHKDRSA---HQKESKKAAPANDRAELELPDNNGLTRGQNFMKVEKWLRSSCKHEQIDITPKQITNIEDGPTDAPDAAAEPPSEKDRLP 171
            MSFL+CC+G D RPPPE +RPV +S                   T A     K+K P EVFFDPTKPDGQLSSVTDPP S RD S+  KKK+ K+RS      +E++K A A+D+A+L  PDNNGLTRGQNFMKVEKWLR++  ++QIDITP  ITNIED P    DAA +PPSEKDRLP
Sbjct:    1 MSFLRCCIGGDSRPPPEQIRPVGASAPPSRRGHARPPPIPQPGHTPAQDVSSKLKLPNEVFFDPTKPDGQLSSVTDPPNSARDFSEMNKKKDPKERSRPGRQHRETRKDAAADDKADLNAPDNNGLTRGQNFMKVEKWLRNASMYQQIDITPGPITNIEDTPPQISDAA-DPPSEKDRLP 179
The following BLAST results are available for this feature:
BLAST of Gchil1646.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IFH4_9FLOR1.260e-8571.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q3R2_CHOCR8.400e-5757.78Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1398829..1399510 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1646.t1Gchil1646.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1398829..1399510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1646.t1 ID=Gchil1646.t1|Name=Gchil1646.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=186bp
MSFLKCCVGADPRPPPENVRPVSSSHRRSAAAAAAAYATGASGNKKKMKH
PTEVFFDPTKPDGQLSSVTDPPTSNRDHSDPKKKKEHKDRSAHQKESKKA
APANDRAELELPDNNGLTRGQNFMKVEKWLRSSCKHEQIDITPKQITNIE
DGPTDAPDAAAEPPSEKDRLPHAMVNHHPTTNPSR*
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