Gchil1620.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1620.t1
Unique NameGchil1620.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length402
Homology
The following BLAST results are available for this feature:
BLAST of Gchil1620.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..302
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..401

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1215566..1216771 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1620.t1Gchil1620.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1215566..1216771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1620.t1 ID=Gchil1620.t1|Name=Gchil1620.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=402bp
MSSVRHSALLASPGLLSAHALLTLDSVSPCHEDASQAASARDTQRRISFG
AVTDQLIHRNDSQLRSHSPCPKKRTPSISVRNRGPTSDALPEPHPQLSQE
PTQNRIIPEESQRKVSSESDQWHVLPEPSQQPSPEAPHQLSDSCSPLFPP
SQRALLTAKHSPSQPTPPTSHRPSPDQPLQFSRTPTPSAKSPLCSKMRFR
RFATSLSMGNSACSWAGELGSPSSAALSIFRKPEHRLIEQPLQLRGISPP
RCKPRAPSPTISEPSPVQQPKQTPEQLKRDPIPTQDTEELALQSGTEKAG
DIEHTVEDVLSEENRVKEMTNSTDEVHHDTQVDIRMRSMCNNEIMDVCSS
TQSPCSAGLKEKNKTEGENTKAQDDAVYCRSVLVSIPSGVLRSVDYNESP
Q*
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