Gchil1606.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1606.t1
Unique NameGchil1606.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length204
Homology
BLAST of Gchil1606.t1 vs. uniprot
Match: A0A2V3IFK5_9FLOR (Staphylococcal-like nuclease CAN1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK5_9FLOR)

HSP 1 Score: 326 bits (836), Expect = 1.280e-111
Identity = 162/208 (77.88%), Postives = 181/208 (87.02%), Query Frame = 0
Query:    1 MGSCLSLCFPSEKPPQQQSQ-----QSPLSYAAAVAQTAVHTVSELIQQPQHAVPT-GAEGKQVIRGAYVFKMPDGDTFNCDYTDGSGEKATARVRVMAIDCPETKQNFGQQATQIGQQMLLRTNVTLYVHTTDRYGRLVADVITKDGVNYGEYMLEQGAAWHYKAYDKRQHLAHIEEEAKNANIGLWSFARPLEPWEYRRRKRNNNK 202
            MGSCLSLCFPSEKP QQQ+Q     QS LSYAAAVAQTA   V+++I+ PQ   P  GAEG +VIR AYVFKMPDGDTF CDYTD +GEK TARVR+MAIDCPETKQNFG+QA++IGQQ+LLRTNVTLYVHTTDRYGR+VADVIT+DG NYGEYML+QGAAWHYKAYDKRQ+LA +EE+AK A +GLWSF RPLEPWEYRRRKR NNK
Sbjct:    1 MGSCLSLCFPSEKP-QQQAQHEPPAQSTLSYAAAVAQTAAQAVADVIKTPQQPQPPPGAEGMRVIRNAYVFKMPDGDTFTCDYTDTNGEKQTARVRIMAIDCPETKQNFGKQASEIGQQVLLRTNVTLYVHTTDRYGRVVADVITQDGRNYGEYMLQQGAAWHYKAYDKRQNLADLEEQAKQARVGLWSFPRPLEPWEYRRRKRQNNK 207          
BLAST of Gchil1606.t1 vs. uniprot
Match: UPI001E1D38D5 (uncharacterized endonuclease-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D38D5)

HSP 1 Score: 159 bits (403), Expect = 5.180e-46
Identity = 92/198 (46.46%), Postives = 115/198 (58.08%), Query Frame = 0
Query:    1 MGSCLSLCFPSEKPPQQQSQQSPLSYAAAVAQTAVHTVSELIQQPQHA-VP-TGAEGKQ-VIRGAYVFKMPDGDTFNCDYTDGSGEKATARVRVMAIDCPETKQNFGQQATQIGQQMLLRTNVTLYVHTTDRYGRLVADVITKDGVNYGEYMLEQGAAWHYKAYDKRQHLAHIEEEAKNANIGLWSFARPLEPWEYRR 195
            MG+CL     SE P  Q    +     A   Q   H     + +P HA VP + A G Q  I  A V ++PDGDTF  +Y    G    ARVR+M IDCPE  Q FG +A  IG+ M+    VTL VHTTD+YGRLVAD+ T+ G +YG+ ML  GAAWHY  YD RQ LA + ++AK A  GLW++  P  PW+YRR
Sbjct:    1 MGACLGKLL-SELPDGQGHATATHPQQAYSGQ---HQPHGALDKPSHAGVPQSSAHGVQYTIEDARVVRVPDGDTFYVEYAGPDGRLVEARVRLMGIDCPEKAQEFGLEARNIGRGMVQGRTVTLLVHTTDQYGRLVADIHTEAGQDYGQEMLRAGAAWHYTHYDNRQELASLMQDAKAARRGLWAYPNPQPPWDYRR 194          
BLAST of Gchil1606.t1 vs. uniprot
Match: A0A8F9RFT3_9FLAO (Thermonuclease family protein n=1 Tax=Flavobacterium sp. WSW3-B6 TaxID=2856519 RepID=A0A8F9RFT3_9FLAO)

HSP 1 Score: 112 bits (279), Expect = 2.230e-27
Identity = 59/140 (42.14%), Postives = 83/140 (59.29%), Query Frame = 0
Query:   64 VFKMPDGDTFNCDYTDGSGEKATARVRVMAIDCPETKQNFGQQATQIGQQMLLRTNVTLYVH-TTDRYGRLVADVITKDGVNYGEYMLEQGAAWHYKAYDKRQHLAHIEEEAKNANIGLWSFARPLEPWEYRRRKRNNNK 202
            V  + DGDTF+  Y +G  E    RVR+  IDCPE KQ FG+ A +    +     VT+      DRYGR+V  VITK+G+N  E +++ G AWHYK Y     LA +E +A+   +GLWS   P+ PW+YR+ +RN ++
Sbjct:   67 VVGISDGDTFDVLY-EGYAE----RVRLAEIDCPEKKQAFGKAAKKYASDLCFGKIVTVASGGKRDRYGRVVGTVITKEGINVNEALIQAGLAWHYKDYSDSDALAEMENKARVEKVGLWSAKNPVAPWQYRKNRRNRSR 201          
BLAST of Gchil1606.t1 vs. uniprot
Match: UPI001F2F1B6D (thermonuclease family protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=UPI001F2F1B6D)

HSP 1 Score: 110 bits (274), Expect = 1.150e-26
Identity = 58/136 (42.65%), Postives = 79/136 (58.09%), Query Frame = 0
Query:   64 VFKMPDGDTFNCDYTDGSGEKATARVRVMAIDCPETKQNFGQQATQIGQQMLLRTNVTLYVH-TTDRYGRLVADVITKDGVNYGEYMLEQGAAWHYKAYDKRQHLAHIEEEAKNANIGLWSFARPLEPWEYRRRKR 198
            V  + DGDTF   Y DG  E    R+R+  IDCPE+KQ FG  A +    +     VT+      DRYGR+V  VIT +G+N  E +++ G AWHYK Y   + LA +E+EA+   +GLW+  RP  PW +R+R R
Sbjct:   66 VVSIKDGDTFEVLY-DGLAE----RIRLAEIDCPESKQAFGNVAKKYASDLCFGQTVTVESGGKRDRYGRVVGTVITDNGINVNESLVKAGLAWHYKDYSDSEELAQMEQEARANKVGLWADKRPTAPWNWRKRNR 196          
BLAST of Gchil1606.t1 vs. uniprot
Match: A0A1E4HZ41_9BACT (TNase-like domain-containing protein n=1 Tax=Planctomycetes bacterium SCN 63-9 TaxID=1660165 RepID=A0A1E4HZ41_9BACT)

HSP 1 Score: 107 bits (267), Expect = 1.790e-25
Identity = 59/133 (44.36%), Postives = 77/133 (57.89%), Query Frame = 0
Query:   64 VFKMPDGDTFNCDYTDGSGEKATARVRVMAIDCPETKQNFGQQATQIGQQMLLRTNVTLYVHTTDRYGRLVADVITKDGVNYGEYMLEQGAAWHYKAYDKR-QHLAHIEEEAKNANIGLWSFARPLEPWEYRR 195
            V  + DGDT     T  +G K   RVR+  ID PE+ Q+FGQ+A Q    +     VT+ VHTTDRYGR VA++I  DG +    ++  G AW Y+ Y    + LA +E EAK A  GLWS   P+ PWE+RR
Sbjct:   28 VVGVSDGDTV----TVLTGAKQQVRVRLWGIDAPESGQDFGQRAKQAASDLAFGRQVTVKVHTTDRYGRTVAEIILPDGRSLNRELVRSGWAWWYRQYAPADRELASLEAEAKAAKRGLWSGPNPVAPWEWRR 156          
BLAST of Gchil1606.t1 vs. uniprot
Match: A0A1G3Z792_9BACT (TNase-like domain-containing protein n=1 Tax=Verrucomicrobia bacterium GWC2_42_7 TaxID=1802430 RepID=A0A1G3Z792_9BACT)

HSP 1 Score: 105 bits (261), Expect = 2.890e-25
Identity = 55/138 (39.86%), Postives = 77/138 (55.80%), Query Frame = 0
Query:   64 VFKMPDGDTFNCDYTDGSGEKATARVRVMAIDCPETKQNFGQQATQIGQQMLLRTNVTLYVHTTDRYGRLVADVITKDGVNYGEYMLEQGAAWHYKAYDKRQHLAHIEEEAKNANIGLWSFARPLEPWEYRRRKRNNN 201
            V K+ DGDT      DG  EK    +R+  IDCPE  Q FGQ AT+    +  +  VT+ V TTDRYGRLV +VI  DG N    ++  G AW Y+ Y     L  +E EA+    GLW    P+ PW++R+ +++++
Sbjct:   16 VVKVTDGDTIQV-MRDGKAEK----IRLAGIDCPEKNQAFGQAATKYTLSLAAQEIVTVQVETTDRYGRLVGEVILPDGKNLNRELVRAGYAWWYRKYSSDITLGDLESEARINRCGLWVDPNPVSPWDWRKNRKSSS 148          
BLAST of Gchil1606.t1 vs. uniprot
Match: UPI001C87A4AB (thermonuclease family protein n=1 Tax=Ornithobacterium rhinotracheale TaxID=28251 RepID=UPI001C87A4AB)

HSP 1 Score: 106 bits (264), Expect = 2.900e-25
Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 0
Query:   26 YAAAVAQTAVHTVSELIQQPQHAVPTGAEGKQVIRGAYVFKMPDGDTFNCDYTDGSGEKATARVRVMAIDCPETKQNFGQQATQIGQQMLLRTNVTLYVH-TTDRYGRLVADVITKDGVNYGEYMLEQGAAWHYKAYDKRQHLAHIEEEAKNANIGLWSFARPLEPWEYRRRKRNNNKK 203
            ++A + + AV      ++Q   ++P GA  K       V  + DGDT      DG  +K    VR+  IDCPE KQ FG  A +    ++   NV L  +   DRYGRL+A++IT+DG+N  + ++++G AWH+K Y K Q  A +E EA+   +GLW    P+ PW +R+ +R   KK
Sbjct:   20 HSAHIPRVAVQPKPVSVKQ---SIPQGAAFK-------VIGVIDGDTVKL-LIDGLEQK----VRLAHIDCPEKKQAFGNVAKKAISDLIFGKNVYLVWNGERDRYGRLIAEIITEDGINVNKLLVKKGLAWHFKKYSKNQDYAQLEIEARQNKVGLWVDPNPIPPWIFRQMQREAAKK 183          
BLAST of Gchil1606.t1 vs. uniprot
Match: UPI000E1C9ABC (thermonuclease family protein n=1 Tax=Winogradskyella aurantiaca TaxID=2219558 RepID=UPI000E1C9ABC)

HSP 1 Score: 105 bits (261), Expect = 3.600e-25
Identity = 54/137 (39.42%), Postives = 76/137 (55.47%), Query Frame = 0
Query:   62 AYVFKMPDGDTFNCDYTDGSGEKATARVRVMAIDCPETKQNFGQQATQIGQQMLLRTNVTLYVHTTDRYGRLVADVITKDGVNYGEYMLEQGAAWHYKAYDKRQHLAHIEEEAKNANIGLWSFARPLEPWEYRRRKR 198
            A V  + DGDT      D +    T ++R++ IDCPE KQ F  +A Q     +   NV + V  TDRYGRLVA++I    +N  + +L+ G AWHY+ Y     L  +E+EA+   IGLWS    + PW+YR  K+
Sbjct:   24 AKVIGITDGDTVKVLKLDST----TVKIRLVNIDCPERKQAFSTKAKQFTSDAVFSKNVRIEVIKTDRYGRLVANIIYDQDLNLSKELLKAGLAWHYQKYSNDASLQQLEDEARAQKIGLWSDPHAIAPWQYRSNKK 156          
BLAST of Gchil1606.t1 vs. uniprot
Match: A0A5J4YQY2_PORPP (Putative 38.1 kDa protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQY2_PORPP)

HSP 1 Score: 110 bits (274), Expect = 6.550e-25
Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = 0
Query:   88 RVRVMAIDCPETKQNFGQQATQIGQQMLLRTNVTLYVHTTDRYGRLVADVITKDGVNYGEYMLEQGAAWHYKAYDKRQHLAHIEEEAKNANIGLWSFARPLEPWEYRRRKRN 199
            R+R+ A+D PE KQ FG+QA     Q  L   VT+ V+  DRY R VADV+T +G    E +L  G AWHYKAYD R ++A +E+EA+ A  GLW    P  PW++R   RN
Sbjct:  296 RIRLRAVDTPEGKQAFGEQARAFTAQRCLNKAVTVRVYDVDRYNRYVADVVTSEGKLLNEELLAAGWAWHYKAYDDRANMAQLEQEARRAGRGLWVDENPTPPWDFRAANRN 407          
BLAST of Gchil1606.t1 vs. uniprot
Match: A0A7X6ZK87_9BACT (Thermonuclease family protein n=1 Tax=Fibrobacter sp. TaxID=35828 RepID=A0A7X6ZK87_9BACT)

HSP 1 Score: 103 bits (258), Expect = 4.050e-24
Identity = 56/141 (39.72%), Postives = 81/141 (57.45%), Query Frame = 0
Query:   64 VFKMPDGDTFNCDYTDGSGEKATARVRVMAIDCPETKQNFGQQATQIGQQMLLRTNVTLYVHTTDRYGRLVADVITKDGVNYGEYMLEQGAAWHYKAYDK-RQHLAHIEEEAKNANIGLWSFARPLEPWEYRRRKRNNNKK 203
            V K+ DGDTF+  +  G   +   RVR+  IDCPE+ Q+FG +AT+    +++   V + +  TDRY RLV DV   D +N   +++  G AW YK Y K R     +E +A+   +GLWS   P  PWE+R+ KR N+ K
Sbjct:   26 VTKVSDGDTFH--FMVGGKRQ---RVRLYGIDCPESNQDFGDEATRAVDSLIMGKEVKIQLINTDRYQRLVGDVWVNDSLNLNAWLIANGYAWWYKQYGKDRPEWEKLEAQARRQKLGLWSQNDPTPPWEWRKMKRANSAK 161          
The following BLAST results are available for this feature:
BLAST of Gchil1606.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFK5_9FLOR1.280e-11177.88Staphylococcal-like nuclease CAN1 n=1 Tax=Gracilar... [more]
UPI001E1D38D55.180e-4646.46uncharacterized endonuclease-like n=1 Tax=Mercenar... [more]
A0A8F9RFT3_9FLAO2.230e-2742.14Thermonuclease family protein n=1 Tax=Flavobacteri... [more]
UPI001F2F1B6D1.150e-2642.65thermonuclease family protein n=2 Tax=Flavobacteri... [more]
A0A1E4HZ41_9BACT1.790e-2544.36TNase-like domain-containing protein n=1 Tax=Planc... [more]
A0A1G3Z792_9BACT2.890e-2539.86TNase-like domain-containing protein n=1 Tax=Verru... [more]
UPI001C87A4AB2.900e-2536.31thermonuclease family protein n=1 Tax=Ornithobacte... [more]
UPI000E1C9ABC3.600e-2539.42thermonuclease family protein n=1 Tax=Winogradskye... [more]
A0A5J4YQY2_PORPP6.550e-2547.32Putative 38.1 kDa protein n=1 Tax=Porphyridium pur... [more]
A0A7X6ZK87_9BACT4.050e-2439.72Thermonuclease family protein n=1 Tax=Fibrobacter ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016071Staphylococcal nuclease (SNase-like), OB-foldSMARTSM00318SNASE_2coord: 55..184
e-value: 1.5E-20
score: 84.3
IPR016071Staphylococcal nuclease (SNase-like), OB-foldPFAMPF00565SNasecoord: 88..183
e-value: 5.0E-21
score: 75.2
IPR016071Staphylococcal nuclease (SNase-like), OB-foldPROSITEPS50830TNASE_3coord: 62..184
score: 26.97868
IPR035437SNase-like, OB-fold superfamilyGENE3D2.40.50.90coord: 56..185
e-value: 8.6E-31
score: 108.8
IPR035437SNase-like, OB-fold superfamilySUPERFAMILY50199Staphylococcal nucleasecoord: 62..191
NoneNo IPR availablePANTHERPTHR12302:SF3SERINE/THREONINE-PROTEIN KINASE 31coord: 45..197
NoneNo IPR availablePANTHERPTHR12302EBNA2 BINDING PROTEIN P100coord: 45..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1146963..1147658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1606.t1Gchil1606.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1146963..1147658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1606.t1 ID=Gchil1606.t1|Name=Gchil1606.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=204bp
MGSCLSLCFPSEKPPQQQSQQSPLSYAAAVAQTAVHTVSELIQQPQHAVP
TGAEGKQVIRGAYVFKMPDGDTFNCDYTDGSGEKATARVRVMAIDCPETK
QNFGQQATQIGQQMLLRTNVTLYVHTTDRYGRLVADVITKDGVNYGEYML
EQGAAWHYKAYDKRQHLAHIEEEAKNANIGLWSFARPLEPWEYRRRKRNN
NKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016071Staphylococal_nuclease_OB-fold
IPR035437SNase_OB-fold_sf