Gchil1597.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1597.t1
Unique NameGchil1597.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length407
Homology
BLAST of Gchil1597.t1 vs. uniprot
Match: A0A2V3IJ32_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ32_9FLOR)

HSP 1 Score: 324 bits (830), Expect = 4.970e-105
Identity = 182/380 (47.89%), Postives = 247/380 (65.00%), Query Frame = 0
Query:   25 MPPTHTYTAPPSPDDIQRNQSLAPSSSRIPFFAWLCIGCIPFLWLFLVLNSPRPLYNIFFTLLSILPAILVGKFVLKVFADEAVSKSFLISQFLLGAFPLSVVVVIVETVWALVFGKILFSSEIVQFNEFLGLDSAIDGKPPSGTGVNR--MIREIHSTFASSGDSLGKSPDPDKILEYLREHVPLWKMIVFALFFAFIVAGLTEEVAKWTLARRYRVVNKMAENLEWDRRISCRGILSVACTGALGFATIENYGFVTGLASSPDSKFGLGLVAMALFRGLLAFPVHVGAQFYVAIAAAQSYIFREPIGVMKSLFIAVMFHGLFDAISFLMLLFVGVLGAPSWMNVFAPILQSCLTVLLVVLCRGRYKALLERERMVFLS 402
            MP +H YTA P PD+  R  S   S+S  P  A +C   +  +WL  +L SPRP Y + FT ++ILPA LV  FVL+ F D AVSKSFL SQF+LGA PLS  V+IVET+  LV    LFSS++ +  + +         P + T  NR  + + IH+  ASS D    S   D + + + E +PLWK+++ ++  AF+VA LTEE+ KW +ARRY++VN++  N++  R ISC+GILSVAC GALGFAT E+  F  G++ +P S F L  +    FR LLAFP+HVG Q Y+A+A AQ+++FREP  V+ +LF+AV+FHG FDA  F++ L    LG PSW  +  P +Q  L VLL+VLCRGRYKALLE+E+M+  S
Sbjct:    1 MPQSHDYTAVPQPDEEPRTNSARVSTSDTPTCAIICAVAVSLIWLAFLLVSPRPFYAVLFTFVAILPAYLVALFVLRRFKDHAVSKSFLFSQFILGAVPLSFAVLIVETIIGLVIALTLFSSDMKKIKKLMAASV-----PSAQTHFNRNDLFQTIHTFNASSTDDKSAS---DLLAQQVMEMLPLWKLLLMSILTAFVVAALTEELGKWLIARRYKLVNELEPNVDNARSISCKGILSVACMGALGFATAEHALFSMGMSLAPSSGFPLAQLTTLTFRALLAFPIHVGTQCYIAVATAQTFLFREPSRVLSALFLAVVFHGTFDATPFVLSLLYLKLGIPSWTMLLVPPVQVSLAVLLLVLCRGRYKALLEKEQMLSTS 372          
BLAST of Gchil1597.t1 vs. uniprot
Match: R7QM26_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM26_CHOCR)

HSP 1 Score: 241 bits (615), Expect = 1.030e-72
Identity = 164/411 (39.90%), Postives = 229/411 (55.72%), Query Frame = 0
Query:    1 MGAETHSEPQDANLPSSSHAEEP-EMPPTHTYTAPPSPDDIQRNQSLAPSSSRIPFFAWLCIGCIPFLWLFLVLNSPRPLYNIFFTLLSILPAILVGKFVLKVFADEAVSKSFLISQFLLGAFPLSVVVVIVETVWALVFGK--ILFSSEIVQFNEFLGLDSAIDGKPPSGTGVNRMIREIHSTFASSGDSLGKSPDPDKILEYLREHVPLWKMIVFALFFAFIVAGLTEEVAKWTLARRYRVVNKMAENLEWDR--RISCRGILSVACTGALGFATIENYGFVTGLASSPDSKFGLGLVAMALFRGLLAFPVHVGAQFYVAIAAAQSYIFREPIGVMKSLFIAVMFHGLFDAISFLMLLFVGVLGAPSWMNVFAPILQSCLTVLLVVLCRGRYKALLERERMVFLSVNPV 406
            MGA+   E + A  PS+S  + P E+ PT        P+D  R    A   SR+   + + +  I  + +  V  SPRP +   F LLS+LPA  +  FV   F D+++  ++L++Q LLGA PL +  +I E  W L FG   ++F  E+ +      ++ AID  P                   + D  GK  D   +L  + EHV LWKMI+F L  AF+ AG  EEVAKW LARRYR V++    L+ D   RI C+GIL++AC GALGFA  EN G++   A S    F   LV + L RGLLA+P+H+G QF+VA++AAQ Y+F++   VM +LF+AV+FHG FD ++ L +L +G    P W+    P+    L  LL++LCR RYKALL RE +V  S  PV
Sbjct:    1 MGAQL--EDEAAGAPSTSTGDIPIELEPTRRSDGYIPPEDPSRTNVEAGDYSRMSSGSRISLVTIAIMLVIFVALSPRPFFTSLFVLLSLLPAFPIIHFVRTKFDDKSIGWTYLLNQLLLGAIPLVLFTIIAE--WLLTFGIGFLIFEKELRE------VEIAIDTPP-------------------TVDEDGKRHD---LLANVLEHVALWKMILFFLLIAFVTAGFIEEVAKWMLARRYRKVDQENAELDADSGARIGCKGILAIACMGALGFAACENMGYILVSALSIRKGFSFRLVGITLLRGLLAYPLHIGTQFFVAVSAAQWYVFKDKSNVMLALFVAVLFHGTFDGVALLGMLLIGGNIIPFWVGYLIPVFDFMLVGLLLLLCRSRYKALLVRESLVLAS-EPV 378          
BLAST of Gchil1597.t1 vs. uniprot
Match: R7QJI0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJI0_CHOCR)

HSP 1 Score: 209 bits (531), Expect = 2.740e-60
Identity = 129/331 (38.97%), Postives = 188/331 (56.80%), Query Frame = 0
Query:   70 FLVLNSPRPLYNIFFTLLSILPAILVGKFVLKVFADEAVSKSFLISQFLLGAFPLSVVVVIVETVWALVFGKILFSSEIVQFNEFLGLDSAIDGKPPSGTGVNRMIREIHSTFASSGDSLGKSPDPDKILEYLREHVPLWKMIVFALFFAFIVAGLTEEVAKWTLARRYRVVNKMAENLEWDRRISCRGILSVACTGALGFATIENYGFVTGLA--SSPDSKFGLGLVAMALFRGLLAFPVHVGAQFYVAIAAAQSYIFREPIGVMKSLFIAVMFHGLFDAISFLMLLFVGVLGAPSWMNVFAPILQSCLTVLLVVLCRGRYKALLERERM 398
            F V  +P       F L+S+LPA +VG F+L  F DE V + FL  QFL+GA PL + ++ +E               I      + +  AI G           + E       + +  G S    ++++ L + +PLW +I+  +  A++ AG  EEV KW +ARRY  +  +    E  R++ CRGI++ AC  ALGFATIEN G+V+G+A  +S +S   L  V + LFRGLLAFPVHVG Q YVAI A+Q +IF + + V  +LF A++FHG FD ++FL    V +   P+W+ +  P++   + VLL+++CR RYKALLERERM
Sbjct:   63 FAVFTTPDYGVGFLFVLISLLPAAVVGWFILSRFRDEIVGRPFLFLQFLIGAIPLILFIIPLEL--------------ITTAAALIPIVFAIRGD----------LEEDLPKIIEAAEG-GNSKAVQQLIQQLAQSIPLWAIILSLVLIAYVTAGTVEEVGKWLVARRYIGLECICGQDE--RKVGCRGIMASACMAALGFATIENIGYVSGMARAASQNSSAELLFVFLGLFRGLLAFPVHVGTQLYVAITASQRHIFMDDVSVPWALFHAILFHGTFDVLAFLSGALVTLRLWPAWIGLLVPVIDIIMVVLLLLVCRARYKALLERERM 366          
BLAST of Gchil1597.t1 vs. uniprot
Match: A0A7S3Y773_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y773_9EUKA)

HSP 1 Score: 68.9 bits (167), Expect = 4.150e-9
Identity = 49/158 (31.01%), Postives = 79/158 (50.00%), Query Frame = 0
Query:  197 KILEYLREHVPLWKMIVFALFFAFIVAGLTEEVAKWTLARRYRVVNKMAENLEWDRRISCRGILSVACTGALGFATIENYGFVTGLASSPDSKFGLGLVAMALFRGLLAFPVHVGAQFYVAIAAAQSYIFREPIGVMKSLFIAVMFHGLFDAISFLML 354
            K +E    + P+  +++++LF AF VA L EE  K+ L   +    K           +  GI+ +A  GALGFAT+EN G+V     S  S F     A+A+ R LLA P+H      + ++ A++ + R      K L++ ++ HG +D +  L L
Sbjct:  179 KNVENGDNNEPVSHVVIYSLFAAFFVAALCEESLKYYLVVEFPNGTKNVR--------TAYGIVVLATAGALGFATLENIGYV--FQDSSSSSF-----AVAIMRALLAVPLHAATGMIIGLSIAKALMDRSNPACWKVLWLPILLHGTYDGLLMLSL 321          
BLAST of Gchil1597.t1 vs. uniprot
Match: A0A6V3IE03_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3IE03_9EUKA)

HSP 1 Score: 58.9 bits (141), Expect = 5.240e-6
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 0
Query:  197 KILEYLREHVPLWKMIVFALFFAFIVAGLTEEVAKWTLARRYRVVNKMAENLEWDRRISCRGILSVACTGALGFATIENYGFVTGLASSPDSKFGLGLVAMALFRGLLAFPVHVGAQFYVAIAAAQSYIFRE 328
            K +E    + P+  +++++LF AF VA L EE  K+ L   +    K           +  GI+ +A  GALGFAT+EN G+V     S  S F     A+A+ R LLA P+H      + ++ A++ + R 
Sbjct:  179 KNVENGDNNEPVSHVVIYSLFAAFFVAALCEESLKYYLVVEFPNGTKNVR--------TAYGIVVLATAGALGFATLENIGYV--FQDSSSSSF-----AVAIMRALLAVPLHAATGMIIGLSIAKALMDRS 295          
The following BLAST results are available for this feature:
BLAST of Gchil1597.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IJ32_9FLOR4.970e-10547.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QM26_CHOCR1.030e-7239.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QJI0_CHOCR2.740e-6038.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3Y773_9EUKA4.150e-931.01Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A6V3IE03_9EUKA5.240e-631.82Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026898Intramembrane metalloprotease PrsWPFAMPF13367PrsW-proteasecoord: 214..366
e-value: 5.0E-12
score: 45.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 254..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 390..406
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 317..335
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 139..210
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 274..292
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..234
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 363..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 293..316
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 368..389
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 336..362
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 235..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..73
NoneNo IPR availableTMHMMTMhelixcoord: 293..315
NoneNo IPR availableTMHMMTMhelixcoord: 53..72
NoneNo IPR availableTMHMMTMhelixcoord: 254..273
NoneNo IPR availableTMHMMTMhelixcoord: 212..234
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 368..385
NoneNo IPR availableTMHMMTMhelixcoord: 336..358
NoneNo IPR availableTMHMMTMhelixcoord: 117..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1122506..1123726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1597.t1Gchil1597.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1122506..1123726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1597.t1 ID=Gchil1597.t1|Name=Gchil1597.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=407bp
MGAETHSEPQDANLPSSSHAEEPEMPPTHTYTAPPSPDDIQRNQSLAPSS
SRIPFFAWLCIGCIPFLWLFLVLNSPRPLYNIFFTLLSILPAILVGKFVL
KVFADEAVSKSFLISQFLLGAFPLSVVVVIVETVWALVFGKILFSSEIVQ
FNEFLGLDSAIDGKPPSGTGVNRMIREIHSTFASSGDSLGKSPDPDKILE
YLREHVPLWKMIVFALFFAFIVAGLTEEVAKWTLARRYRVVNKMAENLEW
DRRISCRGILSVACTGALGFATIENYGFVTGLASSPDSKFGLGLVAMALF
RGLLAFPVHVGAQFYVAIAAAQSYIFREPIGVMKSLFIAVMFHGLFDAIS
FLMLLFVGVLGAPSWMNVFAPILQSCLTVLLVVLCRGRYKALLERERMVF
LSVNPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026898PrsW