Gchil1596.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1596.t1
Unique NameGchil1596.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length159
Homology
BLAST of Gchil1596.t1 vs. uniprot
Match: A0A2V3IG60_9FLOR (Light-harvesting complex-like protein OHP2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG60_9FLOR)

HSP 1 Score: 207 bits (527), Expect = 5.940e-66
Identity = 116/170 (68.24%), Postives = 132/170 (77.65%), Query Frame = 0
Query:    1 MASQPAFLTPSTVAFTRFRQSQTCRSPATS-RVAIRRLRASATDPERPKNVQ--ASDPPPSEPVTP---------PEPVFEEQVPGKIQLDEITLAKQRTALEEYSRQLRAKRLEEEREASRLFGWVPYAETLNGRLAMFFILTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            M  Q AF   S V+F R R+SQTC  P T+ RVA+RR RA+A DPERPKN+Q    DP P  P            P+  FE+QVPGKIQLDE+T+AKQRT LEEYSR+LR KRLEEEREA+R+FGWVPYAETLNGRLAMFF++TGLLTEYWTGYTLPEQVELMLRTLGI+
Sbjct:    1 MHPQLAFANSSNVSFNRIRRSQTCIRPTTTTRVAVRRWRATAADPERPKNIQPPTPDPLPEPPAQQESQXXXXXVPDAQFEQQVPGKIQLDELTIAKQRTVLEEYSRELRQKRLEEEREAARIFGWVPYAETLNGRLAMFFLVTGLLTEYWTGYTLPEQVELMLRTLGII 170          
BLAST of Gchil1596.t1 vs. uniprot
Match: A0A836CEG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG8_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.360e-26
Identity = 51/92 (55.43%), Postives = 70/92 (76.09%), Query Frame = 0
Query:   67 VFEEQVPGKIQLDEITLAKQRTALEEYSRQLRAKRLEEEREASRLFGWVPYAETLNGRLAMFFILTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            + ++ VPGKI +D+ TLA+Q+  LE+Y+RQLR +RL+ E E +RL GW P AE  NGR AMFFI+ G+LTEYWTG ++P+QVE M   +G+L
Sbjct:   68 IADDNVPGKIVVDDATLAQQQIDLEKYARQLRRQRLDREAEEARLLGWTPAAEINNGRAAMFFIVVGILTEYWTGQSMPQQVETMASVMGLL 159          
BLAST of Gchil1596.t1 vs. uniprot
Match: A0A1X6NQV6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQV6_PORUM)

HSP 1 Score: 105 bits (261), Expect = 1.310e-25
Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 0
Query:   68 FEEQVPGKIQLDEITLAKQRTALEEYSRQLRAKRLEEEREASRLFGWVPYAETLNGRLAMFFILTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            +E   PGK+ L+EI LA+Q+ AL +   +  A+R E ER   R+FGWVP AE LNGRLAMFF +TGLLTE WTG T+PEQVEL+ RTLG +
Sbjct:   84 YEGAPPGKVVLNEIQLAEQKKALNQLGDRWEAERKEVERTEKRIFGWVPGAERLNGRLAMFFFVTGLLTELWTGDTIPEQVELLARTLGFI 174          
BLAST of Gchil1596.t1 vs. uniprot
Match: A0A7V5I693_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I693_9BACT)

HSP 1 Score: 97.4 bits (241), Expect = 5.790e-23
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 0
Query:   70 EQVPGKIQLDEITLAKQRTALEEYSRQLRAKRLEEEREASRLFGWVPYAETLNGRLAMFFILTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            E+VPG+ +L  + LA+QR AL   + + +A RL +E E+ R+FG+   AE +NGR AMFF +TG+LTEYWTG T+P+Q+EL+LR LGI+
Sbjct:   54 ERVPGRYKLSAVELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 142          
BLAST of Gchil1596.t1 vs. uniprot
Match: M1V653_CYAM1 (Similar to high light inducible protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V653_CYAM1)

HSP 1 Score: 97.8 bits (242), Expect = 1.990e-22
Identity = 48/89 (53.93%), Postives = 67/89 (75.28%), Query Frame = 0
Query:   70 EQVPGKIQLDEITLAKQRTALEEYSRQLRAKRLEEEREASRLFGWVPYAETLNGRLAMFFILTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            E+VPG+ +L  I LA+QR AL   + + +A RL +E E+ R+FG+   AE +NGR AMFF +TG+LTEYWTG T+P+Q+EL+LR LGI+
Sbjct:  117 ERVPGRYKLSAIELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 205          
BLAST of Gchil1596.t1 vs. uniprot
Match: A0A7S2MZX0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MZX0_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.600e-21
Identity = 47/89 (52.81%), Postives = 62/89 (69.66%), Query Frame = 0
Query:   70 EQVPGKIQLDEITLAKQRTALEEYSRQLRAKRLEEEREASRLFGWVPYAETLNGRLAMFFILTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            E VPGK+ L+++ LA Q TAL +   + R +RL+ E + +RL GW   AET NGR AMFF++ GLLTEYWTG T+P Q+E MLR  G +
Sbjct:   86 EDVPGKVVLNDVQLAAQVTALSKLEEKWRKERLQTEYDEARLLGWTSQAETYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFI 174          
BLAST of Gchil1596.t1 vs. uniprot
Match: A0A7S2A473_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A473_TRICV)

HSP 1 Score: 92.0 bits (227), Expect = 2.340e-21
Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 0
Query:   70 EQVPGKIQLDEITLAKQRTALEEYSRQLRAKRLEEEREASRLFGWVPYAETLNGRLAMFFILTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            E VPGKI L+E+ LA Q  AL     + R +R+++E + +R+ GW   AET NGR AMFF++ GLLTEYWTG T+P Q+E MLR  G +
Sbjct:    9 ENVPGKIVLNEVELAAQVAALGNLEEKWRKERMQKEYDEARILGWTARAETYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFI 97          
BLAST of Gchil1596.t1 vs. uniprot
Match: A0A7S2P2S9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P2S9_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.580e-21
Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 0
Query:   70 EQVPGKIQLDEITLAKQRTALEEYSRQLRAKRLEEEREASRLFGWVPYAETLNGRLAMFFILTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            E VPGK+ ++EI LAKQ +AL +   + R +R+ +E E   L GW P AE  NGR AMFF++ GLLTEYWTG T+P Q+E MLR  G +
Sbjct:   64 ENVPGKVVMNEIDLAKQVSALNQLEEKWRKERVYKEYEDKALLGWTPQAEMYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFI 152          
BLAST of Gchil1596.t1 vs. uniprot
Match: A0A7S3QJZ1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJZ1_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.500e-21
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 0
Query:   70 EQVPGKIQLDEITLAKQRTALEEYSRQLRAKRLEEEREASRLFGWVPYAETLNGRLAMFFILTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            + VPGK+ +D++ LA Q TAL +   + +  RL+EE + +R+ GW   AET NGR AMFF++ GLLTEYWTG T+P Q+E MLR  G +
Sbjct:   75 DNVPGKMVVDDLALAAQNTALSQIEDRYKKVRLQEEYDLARILGWTNRAETFNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFI 163          
BLAST of Gchil1596.t1 vs. uniprot
Match: A0A6U3SNU5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SNU5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.590e-21
Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 0
Query:   72 VPGKIQLDEITLAKQRTALEEYSRQLRAKRLEEEREASRLFGWVPYAETLNGRLAMFFILTGLLTEYWTGYTLPEQVELMLRTLGIL 158
            VPGK+ L+++ LA Q TAL +   + R +RL++E + +RL GW   AET NGR AMFF++ GLLTEYWTG T+P Q+E MLR  G +
Sbjct:   89 VPGKVVLNDVQLAAQVTALSKLEEKWRKERLQKEYDEARLLGWTSQAETYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFI 175          
The following BLAST results are available for this feature:
BLAST of Gchil1596.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IG60_9FLOR5.940e-6668.24Light-harvesting complex-like protein OHP2, chloro... [more]
A0A836CEG8_9STRA1.360e-2655.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1X6NQV6_PORUM1.310e-2559.34Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7V5I693_9BACT5.790e-2352.81Uncharacterized protein n=1 Tax=bacterium TaxID=18... [more]
M1V653_CYAM11.990e-2253.93Similar to high light inducible protein n=1 Tax=Cy... [more]
A0A7S2MZX0_9STRA1.600e-2152.81Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2A473_TRICV2.340e-2151.69Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2P2S9_9STRA2.580e-2152.81Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3QJZ1_9STRA3.500e-2150.56Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6U3SNU5_9STRA4.590e-2152.87Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..70
NoneNo IPR availablePANTHERPTHR33401LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 16..157
NoneNo IPR availablePANTHERPTHR33401:SF1LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 16..157
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 111..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1120511..1120987 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1596.t1Gchil1596.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1120511..1120987 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1596.t1 ID=Gchil1596.t1|Name=Gchil1596.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=159bp
MASQPAFLTPSTVAFTRFRQSQTCRSPATSRVAIRRLRASATDPERPKNV
QASDPPPSEPVTPPEPVFEEQVPGKIQLDEITLAKQRTALEEYSRQLRAK
RLEEEREASRLFGWVPYAETLNGRLAMFFILTGLLTEYWTGYTLPEQVEL
MLRTLGIL*
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