Gchil1553.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1553.t1
Unique NameGchil1553.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length175
Homology
BLAST of Gchil1553.t1 vs. uniprot
Match: A0A2V3IU38_9FLOR (Protein Abitram n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU38_9FLOR)

HSP 1 Score: 303 bits (777), Expect = 8.740e-104
Identity = 140/166 (84.34%), Postives = 152/166 (91.57%), Query Frame = 0
Query:    1 MHRVVPPGTIERYFTLHYAPGFARLLAPRTKPPPRGEDLCVARHHNGICVLCLSPQHPIVTQRKAVQAVDYRVEMRQVTGKRKKGGIVVEEKTRLCTITCDAGERYAVQCAIKGTLLEYNDSLANNASLVNESPLTEGYLGIVLPWPSQIKTAVDALMSSTDYEKL 166
            MHR+VPP TIERYFTLHYAPG AR L+PRTKPP RGEDLC+ARHHNGICVLCLSP HPIVTQR+A+QAVDYRVEMRQV GKRKKGGIVVEEKTRLCTI C+AGERYAVQC IKGTLLEYND LA + SL+N+ PLTEGYLG+VLPWPSQIKTAVDALMS TDY+ +
Sbjct:    1 MHRIVPPSTIERYFTLHYAPGLARQLSPRTKPPDRGEDLCIARHHNGICVLCLSPLHPIVTQRRAIQAVDYRVEMRQVKGKRKKGGIVVEEKTRLCTIICEAGERYAVQCGIKGTLLEYNDMLAKDTSLINQRPLTEGYLGVVLPWPSQIKTAVDALMSKTDYDNI 166          
BLAST of Gchil1553.t1 vs. uniprot
Match: A0A1X6P8Z2_PORUM (Protein Abitram n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8Z2_PORUM)

HSP 1 Score: 132 bits (332), Expect = 2.610e-35
Identity = 73/169 (43.20%), Postives = 97/169 (57.40%), Query Frame = 0
Query:    6 PPGTIERYFTLHYA-------PGFARLLAPRTKPPPR----GEDLCVARHHNGICVLCLSPQHPIVTQRKAVQAVDYRVEMRQVTGKRKKGGIVVEEKTRLCTITCDAGERYAVQCAIKGTLLEYNDSLANNASLVNESPLTEGYLGIVLPWPSQIKTAVDALMSSTDY 163
            PP T ER FT HYA          AR +     PPP     G D+C+ RH NGICV+ LS  HP+V  R  V  VD+R +++ VTGK+K+GG +VE  T+L  IT   G  Y+V+  ++GTL+E N +LA +  L  E P   GYL +V+P    +KTAVD L+    Y
Sbjct:   23 PPTTTERLFTKHYARHHASAVTDAARTIDAEALPPPGTPSGGADVCICRHSNGICVVTLSELHPLVRSRGRVSDVDFR-DVKVVTGKKKRGGTLVEAGTKLARITTAGGLVYSVRAGVRGTLVEVNPALAASPQLAVEEPAAAGYLAVVMPTLHHVKTAVDHLLGRDAY 190          
BLAST of Gchil1553.t1 vs. uniprot
Match: A0A1X6P9E5_PORUM (Protein Abitram n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9E5_PORUM)

HSP 1 Score: 132 bits (331), Expect = 7.270e-35
Identity = 73/169 (43.20%), Postives = 97/169 (57.40%), Query Frame = 0
Query:    6 PPGTIERYFTLHYA-------PGFARLLAPRTKPPPR----GEDLCVARHHNGICVLCLSPQHPIVTQRKAVQAVDYRVEMRQVTGKRKKGGIVVEEKTRLCTITCDAGERYAVQCAIKGTLLEYNDSLANNASLVNESPLTEGYLGIVLPWPSQIKTAVDALMSSTDY 163
            PP T ER FT HYA          AR +     PPP     G D+C+ RH NGICV+ LS  HP+V  R  V  VD+R +++ VTGK+K+GG +VE  T+L  IT   G  Y+V+  ++GTL+E N +LA +  L  E P   GYL +V+P    +KTAVD L+    Y
Sbjct:   23 PPTTTERLFTKHYARHHASAVTDAARTVDAEALPPPGTPSGGADVCICRHSNGICVVTLSELHPLVRSRGRVSDVDFR-DVKVVTGKKKRGGTLVEAGTKLARITTAGGLVYSVRAGVRGTLVEVNPALAASPQLAVEEPAAAGYLAVVMPTLHHVKTAVDHLLGRDAY 190          
BLAST of Gchil1553.t1 vs. uniprot
Match: A0A8D0CDG7_9SAUR (Protein Abitram n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0CDG7_9SAUR)

HSP 1 Score: 117 bits (294), Expect = 2.970e-30
Identity = 59/168 (35.12%), Postives = 91/168 (54.17%), Query Frame = 0
Query:    6 PPGTIERYFTLHYAPGFARLLAPRTKPPPRG---EDLCVARHHNGICVLCLSPQHPIVTQRKAVQAVDYRVE------MRQVTGKRKKGGIVVEEKTRLCTITCDAGERYAVQCAIKGTLLEYNDSLANNASLVNESPLTEGYLGIVLPWPSQIKTAVDALMSSTDYE 164
            PPG  ERYFT  Y            KP  +G   ED C+ +H N ICV+ ++  HP++   K ++++ Y++         +V+GK K+G   + E   LC I C  GE Y +   I+G L+E N+++ +N SL+ E P TEGY+ +VLP   + K+    LM+  +YE
Sbjct:   15 PPGMTERYFTRWY------------KPDVKGNSCEDHCILQHSNRICVITVADAHPLLQNGKQIESISYQISANCSRLQNKVSGKSKRGAQFLTEFAPLCRIFCSGGEEYTIYSCIRGRLIEVNENILDNPSLLQEKPFTEGYIAVVLPKFEESKSVTQGLMTRKEYE 170          
BLAST of Gchil1553.t1 vs. uniprot
Match: A0A674IQT1_TERCA (Protein Abitram n=2 Tax=Terrapene carolina triunguis TaxID=2587831 RepID=A0A674IQT1_TERCA)

HSP 1 Score: 117 bits (292), Expect = 4.390e-30
Identity = 56/166 (33.73%), Postives = 92/166 (55.42%), Query Frame = 0
Query:    7 PGTIERYFTLHYAPGFARLLAPRTKPPPRGEDLCVARHHNGICVLCLSPQHPIVTQRKAVQAVDYRVE------MRQVTGKRKKGGIVVEEKTRLCTITCDAGERYAVQCAIKGTLLEYNDSLANNASLVNESPLTEGYLGIVLPWPSQIKTAVDALMSSTDYEKL 166
            PG  ERYFT  Y P     L          ED C+ +H N ICV+ L+  HP++   K +++++Y++         +V+GK K+G   + E   LC I+C  GE Y +   I+G L+E N+++ +N +++ E P TEGY+ +VLP   + KT    L++  +YE++
Sbjct:    5 PGVTERYFTRWYKPDVKGNLC---------EDHCILQHSNRICVITLAEAHPLLQNGKTIKSINYQISANCSRLQNKVSGKSKRGAQFLTELAPLCRISCSDGEEYTIYSCIRGRLMEVNENILDNPTILQEKPSTEGYIAVVLPKFEESKTITQGLLTQKEYEEV 161          
BLAST of Gchil1553.t1 vs. uniprot
Match: UPI00145A86C8 (protein Abitram-like n=4 Tax=Acipenseroidei TaxID=186622 RepID=UPI00145A86C8)

HSP 1 Score: 116 bits (290), Expect = 1.320e-29
Identity = 59/165 (35.76%), Postives = 93/165 (56.36%), Query Frame = 0
Query:    8 GTIERYFTLHYAPGFARLLAPRTKPPPRGEDLCVARHHNGICVLCLSPQHPIVTQRKAVQAVDYRVE------MRQVTGKRKKGGIVVEEKTRLCTITCDAGERYAVQCAIKGTLLEYNDSLANNASLVNESPLTEGYLGIVLPWPSQIKTAVDALMSSTDYEKL 166
              + RY+T  Y          ++KP   GED CV +H N ICV+ L+  HP++ + + +++++Y++         +V+GK K+GG  + E   LC ITC  GE Y V   I+G LLE N+ +  N SL+ E P TEGY+ +VLP   + K+    L++ T+YE +
Sbjct:   17 SVVARYYTRWYKTDL------KSKP---GEDHCVLQHSNRICVITLAESHPVLQKGRQIKSINYQISANCSRLQNKVSGKSKRGGQFLTELAPLCRITCMDGEEYTVFSCIRGRLLEVNEDILMNPSLLQEKPSTEGYIAVVLPKFEESKSVTQGLLTQTEYEDI 172          
BLAST of Gchil1553.t1 vs. uniprot
Match: A0A8C6VBP2_NAJNA (Protein Abitram n=6 Tax=Serpentes TaxID=8570 RepID=A0A8C6VBP2_NAJNA)

HSP 1 Score: 114 bits (286), Expect = 6.510e-29
Identity = 57/169 (33.73%), Postives = 91/169 (53.85%), Query Frame = 0
Query:    7 PGTIERYFTLHYAPGFARLLAPRTKPPPRG---EDLCVARHHNGICVLCLSPQHPIVTQRKAVQAVDYRVE------MRQVTGKRKKGGIVVEEKTRLCTITCDAGERYAVQCAIKGTLLEYNDSLANNASLVNESPLTEGYLGIVLPWPSQIKTAVDALMSSTDYEKL 166
            PG  ERYFT  Y            KP  +G   ED C+ +H N ICV+ ++  HP++ + K +++++Y++         +V+GK K+G   + E   LC I C  GE Y +   I+G L+E N+++  N SL+ E P TEGY+ +VLP   + K     L++  +YE+ 
Sbjct:   16 PGVTERYFTRWY------------KPDVKGNQCEDHCILQHSNRICVITIADAHPLLQKEKPIKSINYQISANCNRLQNKVSGKSKRGAQFLTELAPLCRILCSDGEEYTIYSCIRGKLIEVNENILENPSLLQEKPSTEGYIAVVLPKFEESKKVTQGLLTREEYEEF 172          
BLAST of Gchil1553.t1 vs. uniprot
Match: A0A6J0U3I0_9SAUR (Protein Abitram n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0U3I0_9SAUR)

HSP 1 Score: 114 bits (284), Expect = 9.440e-29
Identity = 57/169 (33.73%), Postives = 92/169 (54.44%), Query Frame = 0
Query:    7 PGTIERYFTLHYAPGFARLLAPRTKPPPRG---EDLCVARHHNGICVLCLSPQHPIVTQRKAVQAVDYRVE------MRQVTGKRKKGGIVVEEKTRLCTITCDAGERYAVQCAIKGTLLEYNDSLANNASLVNESPLTEGYLGIVLPWPSQIKTAVDALMSSTDYEKL 166
            P   ERYFT  Y            KP  +G   ED C+ +H N ICV+ L+  HP++ + K ++ ++Y++         +V+GK K+G   + E   LC I+C  GE Y +   I+G L+E N+++ +N SL+ E P TEGY+ +VLP   + K   + L++  +YE +
Sbjct:   16 PAVTERYFTRWY------------KPDVKGNQCEDHCILQHSNRICVVTLADAHPLLQKGKRIERINYQISANCSRLQNKVSGKSKRGAQFLTELAPLCRISCSDGEEYTIYSCIRGKLIEVNENILDNTSLLQEKPFTEGYIAVVLPKFEESKKITEGLLTRKEYEAV 172          
BLAST of Gchil1553.t1 vs. uniprot
Match: G1K9Z8_ANOCA (Protein Abitram n=1 Tax=Anolis carolinensis TaxID=28377 RepID=G1K9Z8_ANOCA)

HSP 1 Score: 114 bits (284), Expect = 1.300e-28
Identity = 56/166 (33.73%), Postives = 90/166 (54.22%), Query Frame = 0
Query:    7 PGTIERYFTLHYAPGFARLLAPRTKPPPRGEDLCVARHHNGICVLCLSPQHPIVTQRKAVQAVDYRVE------MRQVTGKRKKGGIVVEEKTRLCTITCDAGERYAVQCAIKGTLLEYNDSLANNASLVNESPLTEGYLGIVLPWPSQIKTAVDALMSSTDYEKL 166
            PG  ERYFT  Y P     L          ED CV +H N ICV+ ++  HP++ + K ++++ Y++         +V+GK K+G   + E   LC I C  G+ Y +   I+G L+E N+++  N SL+ E P TEGY+ +VLP   + K   + L++  +YE++
Sbjct:   21 PGVTERYFTRWYKPDVKGNLC---------EDHCVLQHSNRICVITIADAHPVLQKGKQIESISYQISANCSRLQNKVSGKSKRGAQFLTELAPLCRIFCTDGDEYTIYSCIRGKLIEVNENILENPSLLQEKPSTEGYIAVVLPKFEESKRITEGLLTRKEYEEV 177          
BLAST of Gchil1553.t1 vs. uniprot
Match: A0A4W3K334_CALMI (Protein Abitram n=3 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3K334_CALMI)

HSP 1 Score: 113 bits (283), Expect = 1.300e-28
Identity = 58/166 (34.94%), Postives = 91/166 (54.82%), Query Frame = 0
Query:    7 PGTIERYFTLHYAPGFARLLAPRTKPPPRGEDLCVARHHNGICVLCLSPQHPIVTQRKAVQAVDYRVE------MRQVTGKRKKGGIVVEEKTRLCTITCDAGERYAVQCAIKGTLLEYNDSLANNASLVNESPLTEGYLGIVLPWPSQIKTAVDALMSSTDYEKL 166
            P  +ERYFT  Y          + KP    ED CV +H N +CV+ L+  HP++   + +Q+++Y++         +VTGK K+GG  + E   LC I C  GE Y +   I+G LLE N+++    SL+ E P TEGY+ +VLP   + K+   AL++   Y+++
Sbjct:   13 PSVVERYFTRWYKTDV------KGKPC---EDHCVLQHSNRLCVITLAESHPLLQSGRKIQSINYQISANCSRLQNKVTGKSKRGGQFLTELAPLCRIKCTDGEEYTIYSCIRGRLLEVNENILQEPSLLQEKPSTEGYIAVVLPKFEESKSITQALITREQYQEI 169          
The following BLAST results are available for this feature:
BLAST of Gchil1553.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IU38_9FLOR8.740e-10484.34Protein Abitram n=1 Tax=Gracilariopsis chorda TaxI... [more]
A0A1X6P8Z2_PORUM2.610e-3543.20Protein Abitram n=1 Tax=Porphyra umbilicalis TaxID... [more]
A0A1X6P9E5_PORUM7.270e-3543.20Protein Abitram n=1 Tax=Porphyra umbilicalis TaxID... [more]
A0A8D0CDG7_9SAUR2.970e-3035.12Protein Abitram n=1 Tax=Salvator merianae TaxID=96... [more]
A0A674IQT1_TERCA4.390e-3033.73Protein Abitram n=2 Tax=Terrapene carolina triungu... [more]
UPI00145A86C81.320e-2935.76protein Abitram-like n=4 Tax=Acipenseroidei TaxID=... [more]
A0A8C6VBP2_NAJNA6.510e-2933.73Protein Abitram n=6 Tax=Serpentes TaxID=8570 RepID... [more]
A0A6J0U3I0_9SAUR9.440e-2933.73Protein Abitram n=1 Tax=Pogona vitticeps TaxID=103... [more]
G1K9Z8_ANOCA1.300e-2833.73Protein Abitram n=1 Tax=Anolis carolinensis TaxID=... [more]
A0A4W3K334_CALMI1.300e-2834.94Protein Abitram n=3 Tax=Callorhinchus milii TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.100coord: 60..167
e-value: 8.9E-10
score: 40.2
IPR033753Glycine cleavage system H-protein/SimiatePFAMPF01597GCV_Hcoord: 108..166
e-value: 4.0E-6
score: 26.7
IPR039169Protein AbitramPANTHERPTHR13651UNCHARACTERIZEDcoord: 6..170
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 37..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:847197..847721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1553.t1Gchil1553.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 847197..847721 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1553.t1 ID=Gchil1553.t1|Name=Gchil1553.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=175bp
MHRVVPPGTIERYFTLHYAPGFARLLAPRTKPPPRGEDLCVARHHNGICV
LCLSPQHPIVTQRKAVQAVDYRVEMRQVTGKRKKGGIVVEEKTRLCTITC
DAGERYAVQCAIKGTLLEYNDSLANNASLVNESPLTEGYLGIVLPWPSQI
KTAVDALMSSTDYEKLGDTSEDWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033753GCV_H/Fam206
IPR039169Abitram
IPR011053Single_hybrid_motif