Gchil1499.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1499.t1
Unique NameGchil1499.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length295
Homology
BLAST of Gchil1499.t1 vs. uniprot
Match: A0A2V3J244_9FLOR (Copine-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J244_9FLOR)

HSP 1 Score: 489 bits (1260), Expect = 2.410e-173
Identity = 238/294 (80.95%), Postives = 264/294 (89.80%), Query Frame = 0
Query:    1 MDTSTFRYYELKIAAKRLPGRMLRIDPIAVVFSKDGSSSEWTELGRTEKRLNEWNPKFSNPIVLPADNDNQRRVDLRVDFYNKEVKDGRFLGAAEVNIFSLIFAKGQPVELELKTPDATKGSPRVFLTALEGFRTESEPSSVKLSFQLMQTNFYGVSMRVFYEISRAGEGLWHPVFKSSHILLDQQGWGQFPTHEISMRDLTMDVESQGILISLYRYRRIGTRKLLGHFQTSVKELTRTSAGDFIPFSANPNEDILSADVQVLHTQKNGLLYEFGLKLINVQWNATNLLENRVK 294
            M  STFRYYELKI+AKRLPGR LRIDPIAVVFSKD +SSEW ELGRTE+RLNEWNP F++ I LPADNDNQRRV+LRVDFYNKEV+  RFLGA EVNIFSLI+AKGQPVELELKTP+ T+GSPRVFLTAL+GFRTESE SSVKLSFQLMQTNFYGVSMR+FYEISRA EG WH VFKS +I +DQQGWGQFPT+EISMRDL MDVES G+LI+LYRYRR+G RKLLGHFQ SVKELTR S GDFIPFSANPNEDI++ADVQV H QK GL+YE GLKLINV WNAT+L +++V+
Sbjct:    1 MQASTFRYYELKISAKRLPGRSLRIDPIAVVFSKDNTSSEWNELGRTERRLNEWNPNFASAIRLPADNDNQRRVELRVDFYNKEVQTARFLGAVEVNIFSLIYAKGQPVELELKTPEPTRGSPRVFLTALQGFRTESEQSSVKLSFQLMQTNFYGVSMRMFYEISRAAEGQWHSVFKSDYIQIDQQGWGQFPTYEISMRDLAMDVESAGLLINLYRYRRLGARKLLGHFQISVKELTRMSVGDFIPFSANPNEDIIAADVQVQHVQKTGLVYEIGLKLINVHWNATSLTDSQVR 294          
BLAST of Gchil1499.t1 vs. uniprot
Match: R7QJD6_CHOCR (C2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJD6_CHOCR)

HSP 1 Score: 388 bits (996), Expect = 3.670e-133
Identity = 190/295 (64.41%), Postives = 229/295 (77.63%), Query Frame = 0
Query:    1 MDTSTFRYYELKIAAKRLPGRMLRIDPIAVVFSKDGSSSEWTELGRTEKRLNEWNPKFSNPIVLPADNDNQRRVDLRVDFYNKEVKDGRFLGAAEVNIFSLIFAKGQPVELELKTPDATKGSPRVFLTALEGFRTESEPSS--VKLSFQLMQTNFYGVSMRVFYEISRAGEGLWHPVFKSSHILLDQQGWGQFPTHEISMRDLTMDVESQGILISLYRYRRIGTRKLLGHFQTSVKELTRTSAGDFIPFSANPNEDILSADVQVLHTQKNGLLYEFGLKLINVQWNATNLLENRV 293
            M +STFR+Y LKI+AKRLPGR LR+DP+AVVF   G + +W E+GRTEKRLNEWNP F+  I LP DNDNQRR  +RVDFYNKE+ + RFLG  EVN ++LI AKG  VELEL TP+  KGSPRVFLTA EG+      SS  V LS QLMQTN+YGVSMR++YEISRAG G W PV KS +I +D+QGWGQFP ++ISM+DLTMD ES G+L +LYRYRR+G++KLLG FQTS+ EL+R S G+F+ F+ N  E +L+ADVQVLHTQK G  Y+  LKL+NVQWNAT L E  V
Sbjct:    1 MQSSTFRFYHLKISAKRLPGRQLRLDPLAVVFV--GGAGQWNEIGRTEKRLNEWNPSFAKSITLPGDNDNQRRAQVRVDFYNKEMTESRFLGTCEVNFYALIHAKGTSVELELNTPEPVKGSPRVFLTAQEGYNQPGADSSSLVNLSMQLMQTNYYGVSMRIYYEISRAGNGTWVPVHKSENIQIDEQGWGQFPANKISMQDLTMDEESCGLLFNLYRYRRLGSKKLLGCFQTSILELSRKSVGEFVQFTPNHKEGLLAADVQVLHTQKTGSTYDVSLKLVNVQWNATLLTEATV 293          
BLAST of Gchil1499.t1 vs. uniprot
Match: A0A1X6PGD5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PGD5_PORUM)

HSP 1 Score: 140 bits (353), Expect = 4.640e-36
Identity = 96/291 (32.99%), Postives = 150/291 (51.55%), Query Frame = 0
Query:    4 STFRYYELKIAAKRLPGRMLRIDPIAVVFSKDGSSSEW-TELGRTEKRLNEWNPKFSNPIVLPADNDNQRRVDLRVDFYNKEVKDGR--FLGAAEVNIFSLIFAKGQPVELELKTPDATKGSPR---VFLTALEGFRTESEPSSVKLSFQLMQTNFYGVSMRVFYEISRAGEGLWHPVFKSSHILLDQQGWGQFPTHEISMRDLTM---DVESQGILISLYRYRRIGTRKLLGHFQTSVKELTRTSAGDF--IPFSANPNEDILSADVQVLHTQKNGLLYEFGLKLINVQW 283
            S +   E+K++A+ L G ++R DPIAVV S   ++    TELGRTE+  N   P +   + +PA         LRVDFY+KEV  G    LG A   + +L    G  V   +                L+A + ++   E  + +L  +L +T FYG    +FY +SRA  G W  V +S    L +  WGQF T + S  +L +    ++   +L+ +YRY+ IG+ +L+GH   SV++L +   G+   + F+ NP  ++LSADV V+H  +   + +  LKL+NV W
Sbjct:    2 SAWHQVEIKVSARGLRGSIVRTDPIAVVSSVGTAAGGGDTELGRTERLANTTRPAWVTGVRVPAATPGGTL--LRVDFYHKEVAPGTSAHLGYASSPLEALTAVDGAQVSAAIVRAGXXXXXXAKAVAHLSASDVYQQMREGRAFELDVELAETVFYGGKTHLFYTLSRAAAGHWVRVAQSERTRLSEFRWGQFDTLKRSFDELGLAGIGLDGTTLLLQVYRYKGIGSHRLVGHIDFSVEQLLKARPGEVGAVTFTPNPMGEVLSADVAVMHGTEYRNVVKLSLKLVNVSW 290          
BLAST of Gchil1499.t1 vs. uniprot
Match: A0A0L0DLD6_THETB (Copine-8 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DLD6_THETB)

HSP 1 Score: 65.5 bits (158), Expect = 2.720e-8
Identity = 70/243 (28.81%), Postives = 109/243 (44.86%), Query Frame = 0
Query:   10 ELKIAAKRLPG--RMLRIDPIAVVFSK-DGSSSEWTELGRTEKRLNEWNPKFSNPIVLPADNDNQ---RRVDLRVDFYNKEVKDGR---FLGAAEVNIFSLIFAKGQPVELEL---KTPDATKGSPRVFLTALEGFRTESEPSSVKLSFQLMQTNFYGVSMRVFYEISRAGEGL---WHPVFKSSHILLD-QQGWGQFPTHEISMRDLTMDVESQGILISLYRYRRIGTRKLLGHFQTSVKEL 236
            EL+ +   L     M + DP+ V+F+K D     + E+GRTEK +N+ NP+F   + +    +     R   L +D +   V D R   ++G AE  + S++ A G  +EL+L   K P    GS R+  TA E   + S          L + +F+G S   +  ISR   G    W P+ K+  +       W  F   E+ M  L      + I I  Y Y + G+   +G FQT++  L
Sbjct:   23 ELRFSCSNLANLDHMSKSDPMVVLFAKRDPPGQGFAEVGRTEKIMNDLNPRFHTALNVSYFFEKVQTFRVAVLDIDEHVSSVSDYRQHDYIGDAEFKLSSVVGASGMSLELQLVNAKVPGRRNGSIRI--TAEEPSNSNSAVRMQIRGHNLDKMDFFGKS-DPYLIISRLRAGAADDWQPIHKTEVVPKTLNPTWRAF---EVPMATLCNADYERPIRIECYDYDKRGSPDFIGAFQTTLTML 259          
BLAST of Gchil1499.t1 vs. uniprot
Match: A0A2T7NI94_POMCA (Uncharacterized protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NI94_POMCA)

HSP 1 Score: 63.9 bits (154), Expect = 9.880e-8
Identity = 63/253 (24.90%), Postives = 111/253 (43.87%), Query Frame = 0
Query:   10 ELKIAAKRLPGR--MLRIDPIAVVFSKDGSSSEWTELGRTEKRLNEWNPKFSNPIVLPADNDNQRRVDLRV---DFYNKEVKDGRFLGAAEVNIFSLIFAKGQPVELELKTPDATKGSPRVFLTALEGFRTESEPSSVKLSFQ---LMQTNFYGVSMRVFYEISRAGEGLWHPVFKSSHILLD-QQGWGQFPTHEISMRDLTMDVESQGILISLYRYRRIGTRKLLGHFQTSVKELTRTSAGDFIPFSANPNE 253
            EL+I  + L  +  M + DP AV++ +      W E+GRTEK +N  NP+FS PI +    +  ++V + V   D    ++ D  FLG  E  +  L+   G P    L   +  K    V   + E  +   E  +V L+F+   L + +F+G S      +  A  G W  V ++  +  +    W  F   E+S+  L    + Q I   +Y +   G+   +G F  +++++ +    +      NP +
Sbjct:  223 ELRIECRNLLNKDIMSKSDPCAVLYQQ--RQGRWEEVGRTEKVINNLNPRFSTPIKIGYLFEEVQKVRISVYDIDNATPQLTDDDFLGQIETTLGQLV--SGSPYTKPLLLTNGYKAGNGVITVSAEEIKEGDE--NVVLTFRAQKLDKMDFFGKSDPYLEILRSAPGGSWQLVHRTEVVKNNLNPSWRPF---ELSVNTLCGRNKKQIIKFDVYDWDSDGSHDYIGGFSATLEDMLQAQQHEVSWPCVNPTK 466          
The following BLAST results are available for this feature:
BLAST of Gchil1499.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J244_9FLOR2.410e-17380.95Copine-1 n=1 Tax=Gracilariopsis chorda TaxID=44838... [more]
R7QJD6_CHOCR3.670e-13364.41C2 domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A1X6PGD5_PORUM4.640e-3632.99Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A0L0DLD6_THETB2.720e-828.81Copine-8 n=1 Tax=Thecamonas trahens ATCC 50062 Tax... [more]
A0A2T7NI94_POMCA9.880e-824.90Uncharacterized protein n=2 Tax=Pomacea canalicula... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR045052CopinePANTHERPTHR10857COPINEcoord: 24..241
NoneNo IPR availablePANTHERPTHR10857:SF125COPINE VIIIcoord: 24..241
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 15..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:404829..405713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1499.t1Gchil1499.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 404829..405713 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1499.t1 ID=Gchil1499.t1|Name=Gchil1499.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=295bp
MDTSTFRYYELKIAAKRLPGRMLRIDPIAVVFSKDGSSSEWTELGRTEKR
LNEWNPKFSNPIVLPADNDNQRRVDLRVDFYNKEVKDGRFLGAAEVNIFS
LIFAKGQPVELELKTPDATKGSPRVFLTALEGFRTESEPSSVKLSFQLMQ
TNFYGVSMRVFYEISRAGEGLWHPVFKSSHILLDQQGWGQFPTHEISMRD
LTMDVESQGILISLYRYRRIGTRKLLGHFQTSVKELTRTSAGDFIPFSAN
PNEDILSADVQVLHTQKNGLLYEFGLKLINVQWNATNLLENRVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045052Copine
IPR035892C2_domain_sf