Gchil1468.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1468.t1
Unique NameGchil1468.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length183
Homology
BLAST of Gchil1468.t1 vs. uniprot
Match: A0A7S1TA87_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TA87_9RHOD)

HSP 1 Score: 64.7 bits (156), Expect = 2.170e-9
Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 0
Query:   22 LQCGV--CHQFYSRRDNLRVHQRVHTGERPFSCRYCMQPFRWQGALRNH-EGIHIRNGEN 78
            +QC V  C + +S R NLRVHQRVHTG++PFSC  C + FRW   LR H    H R  EN
Sbjct:   35 VQCSVADCGKSFSTRYNLRVHQRVHTGDKPFSCTTCGKKFRWSSCLRGHLNSQHGRQREN 94          
BLAST of Gchil1468.t1 vs. uniprot
Match: A0A8J5J928_HOMAM (Zinc finger protein 536-like 12 n=1 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5J928_HOMAM)

HSP 1 Score: 59.7 bits (143), Expect = 1.510e-8
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 0
Query:   21 NLQCGVCHQFYSRRDNLRVHQRVHTGERPFSCRYCMQPFRWQGALRNH-EGIHIRN 75
            ++ C VC +  SRRDNLRVH R HTGERP++C +C    +  G LR H   IH R+
Sbjct:   33 SVVCPVCGKVISRRDNLRVHMRTHTGERPYACPHCPHRSKTGGNLRKHVRSIHGRD 88          
BLAST of Gchil1468.t1 vs. uniprot
Match: A0A7S1XF36_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF36_9RHOD)

HSP 1 Score: 60.1 bits (144), Expect = 8.520e-8
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0
Query:   22 LQCGV--CHQFYSRRDNLRVHQRVHTGERPFSCRYCMQPFRWQGALRNH 68
            +QC V  C + +S R NLRVHQRVH+G +PFSC  C + FRW+ +++ H
Sbjct:   11 IQCPVQGCGRIFSTRYNLRVHQRVHSGVKPFSCHICNKRFRWKSSVKGH 59          
BLAST of Gchil1468.t1 vs. uniprot
Match: H2KSU1_CLOSI (KRAB domain-containing zinc finger protein n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=H2KSU1_CLOSI)

HSP 1 Score: 61.2 bits (147), Expect = 9.000e-8
Identity = 26/65 (40.00%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   23 QCGVCHQFYSRRDNLRVHQRVHTGERPFSCRYCMQPFRWQGALRNH-EGIHIRNGENPISDISRA 86
            +C +C + + RRD+L  H RVH+GE+PF C++C   F   G L+ H   IH++  +  + +ISRA
Sbjct:  187 ECRICSRMFLRRDHLIQHMRVHSGEKPFGCKFCKTSFSAYGNLQRHLRTIHLKAKDTQLYEISRA 251          
BLAST of Gchil1468.t1 vs. uniprot
Match: A0A5B7DS34_PORTR (Zinc finger protein 536 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=A0A5B7DS34_PORTR)

HSP 1 Score: 57.8 bits (138), Expect = 1.070e-7
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0
Query:   21 NLQCGVCHQFYSRRDNLRVHQRVHTGERPFSCRYCMQPFRWQGALRNH 68
            ++ C VC +  SRRDNLRVH R HTGE+P++C +C    +  G LR H
Sbjct:   45 SVVCPVCGKVISRRDNLRVHMRTHTGEKPYACPHCPHRSKTGGNLRKH 92          
BLAST of Gchil1468.t1 vs. uniprot
Match: A0A7S2ZVU7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZVU7_9RHOD)

HSP 1 Score: 58.9 bits (141), Expect = 1.160e-7
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0
Query:   24 CGVCHQFYSRRDNLRVHQRVHTGERPFSCRYCMQPFRWQGALRNHE 69
            C VC +++SR  NLRVH+R+HTGE+PF C  C Q F W      H+
Sbjct:   39 CDVCGKYFSRPYNLRVHRRLHTGEKPFECVRCGQSFMWMDGFNRHK 84          
BLAST of Gchil1468.t1 vs. uniprot
Match: UPI0015B31602 (protein sister of odd and bowel-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015B31602)

HSP 1 Score: 57.8 bits (138), Expect = 1.990e-7
Identity = 24/46 (52.17%), Postives = 30/46 (65.22%), Query Frame = 0
Query:   23 QCGVCHQFYSRRDNLRVHQRVHTGERPFSCRYCMQPFRWQGALRNH 68
            +C  C  F +R+ NL+ H R+HTGERPFSCR C + FR    LR H
Sbjct:    4 RCTYCPHFSNRKGNLKYHMRIHTGERPFSCRICSKGFRRNCDLRRH 49          
BLAST of Gchil1468.t1 vs. uniprot
Match: A0A1V9XGP2_9ACAR (Zinc finger protein-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XGP2_9ACAR)

HSP 1 Score: 59.7 bits (143), Expect = 2.540e-7
Identity = 25/57 (43.86%), Postives = 37/57 (64.91%), Query Frame = 0
Query:   18 ANSNLQCGVCHQFYSRRDNLRVHQRVHTGERPFSCRYCMQPFRWQGALRNHEGIHIR 74
            A+S+ QC +C    +   N+  H RVHTGE+PF+CR+C + F  +GA++ HE  H R
Sbjct:   46 ADSSFQCSLCGYVSANSSNVIRHIRVHTGEKPFACRFCGKAFTQKGAMQKHEKSHER 102          
BLAST of Gchil1468.t1 vs. uniprot
Match: UPI001C4500E0 (protein tramtrack, beta isoform-like isoform X12 n=2 Tax=Astacidea TaxID=6712 RepID=UPI001C4500E0)

HSP 1 Score: 59.7 bits (143), Expect = 3.030e-7
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 0
Query:   21 NLQCGVCHQFYSRRDNLRVHQRVHTGERPFSCRYCMQPFRWQGALRNH-EGIHIRN 75
            ++ C VC +  SRRDNLRVH R HTGERP++C +C    +  G LR H   IH R+
Sbjct:  367 SVVCPVCGKVISRRDNLRVHMRTHTGERPYACPHCPHRSKTGGNLRKHVRSIHGRD 422          
BLAST of Gchil1468.t1 vs. uniprot
Match: A0A3B3XZI6_9TELE (Spalt-like transcription factor 3b n=1 Tax=Poecilia mexicana TaxID=48701 RepID=A0A3B3XZI6_9TELE)

HSP 1 Score: 59.7 bits (143), Expect = 3.510e-7
Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 0
Query:   23 QCGVCHQFYSRRDNLRVHQRVHTGERPFSCRYCMQPFRWQGALRNHEGIHIRNGENPISDISRAVP 88
            QC +CH+  S +  LR+H RVHTGERPF C+ C + F  +G L+ H  +H    E P   +  + P
Sbjct:  435 QCILCHRILSCQSALRMHYRVHTGERPFKCKACSRGFTTKGNLKTHVTVH---RETPPVQVQHSCP 497          
The following BLAST results are available for this feature:
BLAST of Gchil1468.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1TA87_9RHOD2.170e-953.33Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A8J5J928_HOMAM1.510e-850.00Zinc finger protein 536-like 12 n=1 Tax=Homarus am... [more]
A0A7S1XF36_9RHOD8.520e-851.02Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
H2KSU1_CLOSI9.000e-840.00KRAB domain-containing zinc finger protein n=1 Tax... [more]
A0A5B7DS34_PORTR1.070e-750.00Zinc finger protein 536 n=1 Tax=Portunus trituberc... [more]
A0A7S2ZVU7_9RHOD1.160e-750.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
UPI0015B316021.990e-752.17protein sister of odd and bowel-like n=1 Tax=Stego... [more]
A0A1V9XGP2_9ACAR2.540e-743.86Zinc finger protein-like n=1 Tax=Tropilaelaps merc... [more]
UPI001C4500E03.030e-750.00protein tramtrack, beta isoform-like isoform X12 n... [more]
A0A3B3XZI6_9TELE3.510e-740.91Spalt-like transcription factor 3b n=1 Tax=Poecili... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 22..44
e-value: 0.039
score: 23.1
coord: 50..72
e-value: 0.31
score: 20.1
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 23..44
e-value: 1.3E-4
score: 22.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 52..72
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 24..44
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 22..49
score: 14.481979
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 50..79
score: 10.034397
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 20..44
e-value: 2.3E-9
score: 38.8
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 45..74
e-value: 1.1E-9
score: 40.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..141
NoneNo IPR availablePANTHERPTHR24381:SF305ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 41coord: 20..74
NoneNo IPR availablePANTHERPTHR24381ZINC FINGER PROTEINcoord: 20..74
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 23..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:213789..214337 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1468.t1Gchil1468.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 213789..214337 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1468.t1 ID=Gchil1468.t1|Name=Gchil1468.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=183bp
MAPTPAPTRRRRGRRTAANSNLQCGVCHQFYSRRDNLRVHQRVHTGERPF
SCRYCMQPFRWQGALRNHEGIHIRNGENPISDISRAVPRAVPQFAYTTPS
HGGAGGAGGVDGAPAERVEMVPGEADSRETHSEMALSAGANVGSESLPLP
LPLPALYTTSQGTGYWADTVLDDLNPRDRSRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf