Gchil1409.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1409.t1
Unique NameGchil1409.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length124
Homology
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BLAST of Gchil1409.t1 vs. uniprot
Match: A0A2V3IYI2_9FLOR (U3 small nucleolar RNA-associated protein 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYI2_9FLOR)

HSP 1 Score: 118 bits (295), Expect = 1.290e-28
Identity = 62/114 (54.39%), Postives = 75/114 (65.79%), Query Frame = 0 
Query:   10 QIPLADVKPTARKRVSRANQAAHLSYVVLREVIDATILQTDAPGVLQPQNDLEHTYHFMQQALRPHVNIATAANADFQLRLDDSGLAPYHTACFSRYSRSLWIASRLGPVSMLD 123
            Q  L  VKPT RKRV+RAN A        +   DAT+L +DAPG+LQPQ+DLEHTYHF Q  L+PH+++AT            S LAPYH+A FSR SRS+ IASRLG VS+ D
Sbjct:   12 QTDLDAVKPTTRKRVARANDAVEHVIRTRKANRDATVLHSDAPGLLQPQSDLEHTYHFTQAQLKPHIDLATQXXXXXXXXXXXSRLAPYHSALFSRSSRSMLIASRLGHVSLFD 125
The following BLAST results are available for this feature:
BLAST of Gchil1409.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYI2_9FLOR1.290e-2854.39U3 small nucleolar RNA-associated protein 7 n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004414_piloncontigtig00004414_pilon:721909..722280 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1409.t1Gchil1409.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004414_pilon 721909..722280 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1409.t1 ID=Gchil1409.t1|Name=Gchil1409.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=124bp
MGRRPRPRQQIPLADVKPTARKRVSRANQAAHLSYVVLREVIDATILQTD
APGVLQPQNDLEHTYHFMQQALRPHVNIATAANADFQLRLDDSGLAPYHT
ACFSRYSRSLWIASRLGPVSMLD*
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