Gchil1356.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1356.t1
Unique NameGchil1356.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length703
Homology
BLAST of Gchil1356.t1 vs. uniprot
Match: A0A2V3IMI9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI9_9FLOR)

HSP 1 Score: 445 bits (1144), Expect = 5.950e-144
Identity = 289/633 (45.66%), Postives = 381/633 (60.19%), Query Frame = 0
Query:   13 TGAPEPSQPSRIPVHSRSHTGGSTGVPRGKASRPSVSDSTPPASG-AGPASAAAQILSPARD-VTLHPIFAAVEEQLRCMREAQVILAEQFDSIPKKVNGTATQDFSEDLCVLRADMNSILESLGGPSAFVKDVAEKFSRVRSRLETLEQSLMSGNNPTEPVAVSYKGRKEENR----QARKKQR------NTDPEPSDXXXXXXXXXXXXXEVARCERSSRSKRSTATHGVICARTKERKHIGLKELKPTNSLFKILLSYRYYRLEDSSLDSTPR------------------------DPILVLHFLARFVAEADILGMNEGQAYIALPYLLRGLAEDQYHSVRGTSRASEGGVTCWPEAVQYLLSSNATNPAIQQAIRGLRDTRQRPDESGTDYSTLLNKAFHRFGNVYPAEERCTMFIDGLDPAIRIIAARRREDRPKATYLELEEFVGAEGEALRARTPGSRVRSSKALMLQPGTPSALIIEEQASRRDYDNVQLAHIDLHSIPTTKLPSTLDESQYVIEDDTLLYADNGRVRAPRVPHESGNVRFSRAGWRDTRPVVMFAEPRHPTPASGLICHLCYKTGHTSPQCVLSLREWAQVVINYEALSQENKAVVPNASYIRSQKDVPHHV 609
            TG P+   P  +P  + +  G    VP  +  R SV++  P A G A PA A AQ +S   D  TL  +    E Q+R ++ +QV L +    +  + +    +D S D+ VLRAD+N+++E        +++VAE+ +R+  RLET+EQ+++    P  P A   +G ++ +R      RKK +      ++    SD       XXXXXXE     R+SRSK + ATHG +  R K RKH+GLKELKPTN L++ LLSYRYYRLEDSS++ TPR                        DPIL+L FLARFVAEADILGM+E QAYIALPY LRG+AEDQ++SVRG+SRA+EGGVTCWPEAVQYLL S AT  AIQ AI  LRDTRQ+ +ES T YST L KAFHR GNVY A+ERCTMF+DGLDP IR + AR REDR + TYLEL +F  AEG+ALRAR  G++ RS K L L+     +  +  +     YDN+ L   D  S+PTT+LPST + S   +  D  +YA N  V    VP+ SG  R  R GW+D  P      P        +ICHLCYK GH S  C L +++ A+V++NYEAL+   K  VP ++Y+R++   P ++
Sbjct:   25 TGLPQSLPP--LPRDALTMPGNDDPVPASRGPR-SVNE-VPEAQGPADPALAVAQAMSSRSDEFTLREL----EAQVRILQSSQVNLIQDITKLRTRFDDADVRDVSNDVRVLRADVNTVMEGRKVLGTLLQEVAERLNRLADRLETVEQTIIHDAVP--PGAPVSEGSRKWHRAMDCHRRKKVKMEEDLSSSSSSESDVRSHGFSXXXXXXEPNHRSRASRSKYTEATHGAVRTREKGRKHLGLKELKPTNLLYRRLLSYRYYRLEDSSMERTPRGTGRLKDCIKRLELTLRKHQFTGEDPILILDFLARFVAEADILGMSEAQAYIALPYFLRGMAEDQFNSVRGSSRATEGGVTCWPEAVQYLLRSYATGNAIQAAILALRDTRQKSEESETAYSTRLTKAFHRCGNVYSAQERCTMFVDGLDPTIRTLVARHREDRRRITYLELVQFAQAEGDALRARK-GTKHRSGKVLHLEARQVPSPPLTRRTDHGMYDNMHLLQSD-SSVPTTELPSTTEPSTGDV--DPAMYAGN-HVPGLTVPYSSGT-RTQRPGWKDPYPPRSDRRPHIADQLRHIICHLCYKPGHVSTNCYLLMKDMAKVIVNYEALTPAEKERVPASAYLRARSVFPRNI 641          
BLAST of Gchil1356.t1 vs. uniprot
Match: A0A2V3ICD1_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICD1_9FLOR)

HSP 1 Score: 126 bits (316), Expect = 1.720e-28
Identity = 108/274 (39.42%), Postives = 156/274 (56.93%), Query Frame = 0
Query:   13 TGAPEPSQPSRIPVHSRSHTGGSTGVPRGKASRPSVSDSTPPASG-AGPASAAAQILSPARD-VTLHPIFAAVEEQLRCMREAQVILAEQFDSIPKKVNGTATQDFSEDLCVLRADMNSILESLGGPSAFVKDVAEKFSRVRSRLETLEQSLM-SGNNPTEPVAV-SYKGRKEENRQARKKQR------NTDPEPSDXXXXXXXXXXXXXEVARCERSSRSKRSTATHGVICARTKERKHIGLKELKPTNSLFKILLSYRYYRLEDSSLDSTPR 276
            TG P+   P  +P  + +  G    VP  +  R SV++  P A G A PA AAAQ +S   D  TL  +    E Q+R ++ +QV L +    +  + +    +D S D+ VLRAD+N+++E        +++VAE+ +R+ +RLET+EQ+++     P  PV+  S K  +  +R  RKK +      ++    SD      XXXXXXX      R+SRSK + ATHG +  R K RKH+GLKELKPTN L++ LLSYRYYRLEDSS++ T R
Sbjct:   25 TGLPQSLPP--LPRDALTMPGNDDPVPASRGPR-SVNE-VPEAQGPADPAMAAAQAMSSRSDEFTLREL----EAQVRILQSSQVNLIQDITKLRTRFDDADVRDVSNDVRVLRADVNTVMEGRKVSGTLLQEVAERLNRLAARLETVEQTIIHDAVPPGAPVSEGSRKSHRATDRHRRKKVKMEEGLSSSSSSESDVRSHGSXXXXXXXXXNHRSRASRSKYTEATHGAVRTREKGRKHLGLKELKPTNLLYRKLLSYRYYRLEDSSMERTSR 290          
The following BLAST results are available for this feature:
BLAST of Gchil1356.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMI9_9FLOR5.950e-14445.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICD1_9FLOR1.720e-2839.42Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 621..702
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:904144..906324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1356.t1Gchil1356.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 904144..906324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1356.t1 ID=Gchil1356.t1|Name=Gchil1356.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=703bp
MSSKDRPRTRSQTGAPEPSQPSRIPVHSRSHTGGSTGVPRGKASRPSVSD
STPPASGAGPASAAAQILSPARDVTLHPIFAAVEEQLRCMREAQVILAEQ
FDSIPKKVNGTATQDFSEDLCVLRADMNSILESLGGPSAFVKDVAEKFSR
VRSRLETLEQSLMSGNNPTEPVAVSYKGRKEENRQARKKQRNTDPEPSDS
SSSESDSSDSSVEVARCERSSRSKRSTATHGVICARTKERKHIGLKELKP
TNSLFKILLSYRYYRLEDSSLDSTPRDPILVLHFLARFVAEADILGMNEG
QAYIALPYLLRGLAEDQYHSVRGTSRASEGGVTCWPEAVQYLLSSNATNP
AIQQAIRGLRDTRQRPDESGTDYSTLLNKAFHRFGNVYPAEERCTMFIDG
LDPAIRIIAARRREDRPKATYLELEEFVGAEGEALRARTPGSRVRSSKAL
MLQPGTPSALIIEEQASRRDYDNVQLAHIDLHSIPTTKLPSTLDESQYVI
EDDTLLYADNGRVRAPRVPHESGNVRFSRAGWRDTRPVVMFAEPRHPTPA
SGLICHLCYKTGHTSPQCVLSLREWAQVVINYEALSQENKAVVPNASYIR
SQKDVPHHVLHPRALVVPAPESRVTDVVSHPTASAEPSGPDALALPAQRP
EQPPPAEQAQKNLMWESPLKEGRPQSRGRWRPRRPSLTLRSKPFQGKRPS
MT*
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