Gchil1354.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1354.t1
Unique NameGchil1354.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length603
Homology
BLAST of Gchil1354.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR)

HSP 1 Score: 489 bits (1258), Expect = 5.180e-161
Identity = 275/642 (42.83%), Postives = 361/642 (56.23%), Query Frame = 0
Query:    1 MSRLNTSGLETEPVDDDIPCFLVSSHQNGTGEHLEGCWDLPEEGALRNTDMATQILAIEETNVMPVTREEFLREKAQDAYCRTLADQIRFKGSLLDVDHIGYIMRRSTLDGSLQKVVPKALHTRVLYLAHYSQLSGHPGATRMYYTLKQQFYWPHMAHDVYTFVGQCESCVRTRGGIRKHRKYLKMFPAAGPLEFVAIDLLGPLRKTKNGYQHILVITDRFSKLTRAIPLKKTMSTTLAIAFLNNWVYPYGTPLYLLTDNSSNLASKFLEAVCNLFGIKHYFTTAYHPQTNGQVERFNHTLVSRLRHYTEEHQTGWDELVQPLTYSYNLQVHRSTQTTPFDLVLSRHPPGIV--------------------------------------SRLTAAQKRYKADYDRRVTKVVSVSSGQYVYIDNPPSGKRPRPGDEADDEAIDR----DINSKLLPKSWGSYKVLNASNHTVTVEQDGIPNTISIDRITVAPETVQHRIEAGPSARKPRAVAQRTRPSEDPTPIEVNDDLQRDNPDYNPLTGTEMQPQTVTAEAPDPAPTHEAPNSEHMNPQGGVPPKDQDQTSEEFPVDRLVGHTQTYNGLKHTVRWYGWGPEGDTLEPPATILPHFRIRYWRLRKEQMPA 600
            +SRL T G +TEPVDD++PCF V        ++ EG      E  L N                     EFLRE+A+DA+CR  A+ +    S  D+D  G+++R S LDG+LQ+VVP  L  RVLYLAH+ +L+GH GATRMYYTL++++YWPHMA D  + V  C SC  TRG + K++K LK+FPAAGPLEFVA+DLLGPL KT +G QH+LVITDRFSKLTR+IPL+ T ++ +A AFL+NWVY YG P Y+LTDN    A+KF +AVC L G++HY TTAYHPQ+NGQ ERFN TLV RLRHY EEHQ  WD+ VQPLT++YN QVHRST+TTPFDLVL+R P G++                                      ++L+A+QKRYK D+D++V     V +G +VY+D PP   RP    E    A       +++ KLLPK+ G ++V +A++ TV +EQDG+ N +SIDR+T  P         GP      A+         P+  +                      QT T  A                               E+ VDR+VGH  T  G+++ VRWYG+    DT EP   +   F  RYWR R+E+  A
Sbjct:  250 VSRLRTDGGDTEPVDDEVPCFAV--------QYEEG-----SEALLDN---------------------EFLREQAEDAFCRFAAETVGTPNSKFDIDRYGFLVRTSPLDGTLQRVVPTRLRPRVLYLAHHPRLAGHSGATRMYYTLRREYYWPHMASDALSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLILPGTVPQDAGTHREDPRTPVQYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRPP---RPLTSVERRTRAQGTTGTDELSVKLLPKTEGPFRVRSATDTTVLIEQDGVENRVSIDRVTKMPR--------GPGDTVASAI---------PSASDA---------------------QTTTPRA-------------------------------EYVVDRIVGHRMTRGGIEYKVRWYGYAASDDTYEPSEGLPQPFIDRYWRTRQERTSA 785          
BLAST of Gchil1354.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR)

HSP 1 Score: 465 bits (1196), Expect = 9.230e-151
Identity = 238/493 (48.28%), Postives = 317/493 (64.30%), Query Frame = 0
Query:    1 MSRLNTSGLETEPVDDDIPCFLVSSHQNGTGEHLEGCWDLPEEGALRNTDMATQILAIEETNVMPVTREEFLREKAQDAYCRTLADQIRFKGSLLDVDHIGYIMRRSTLDGSLQKVVPKALHTRVLYLAHYSQLSGHPGATRMYYTLKQQFYWPHMAHDVYTFVGQCESCVRTRGGIRKHRKYLKMFPAAGPLEFVAIDLLGPLRKTKNGYQHILVITDRFSKLTRAIPLKKTMSTTLAIAFLNNWVYPYGTPLYLLTDNSSNLASKFLEAVCNLFGIKHYFTTAYHPQTNGQVERFNHTLVSRLRHYTEEHQTGWDELVQPLTYSYNLQVHRSTQTTPFDLVLSRHPPGIV--------------------------------------SRLTAAQKRYKADYDRRVTKVVSVSSGQYVYIDNPPSG-----KRPRPGDEADDEAIDRDINSKLLPKSWGSYKVLNASNHTVTVEQDGIPNTISIDRITVAP 450
            +SRL T G +T PVDD++ CF+V S +       +  WDL ++   R        +  EE +V  ++   FLRE+A DA+CR  AD +    S  DVD  G+++R+S LDG+LQ+VVP  L  RVLYLAH+ +L+GHPG TRMYYTL++++YWPH+A D +  V  C S   TRG + K++K L++FPAAGP+EFVA+DLLGPL KT +G QH+LVITDRFSKLT +IPL+ T ++ +A AFL+NWVY YG P Y+LTDN    A+KF +AVC L G++ Y TTAYHPQTNGQ ERFN TLV RLRHY EEHQ  WD+ VQPLT++YN QVHRST+TTPFDLVL+R P G++                                      ++LTA+QK+YK + DR+V     V +G +VY+D PP       +R R     D E    D++ KLLPK+ G + V +A++ TV +EQD + N +SIDR+T  P
Sbjct:  315 VSRLRTDGGDTTPVDDEVSCFVVQSQEGSASLLGKVHWDLTQD---RPDGFYVLAVTPEERDVSSISVANFLREQADDAFCRAAADTVGEPNSKFDVDRYGFLVRKSPLDGTLQRVVPNRLRPRVLYLAHHPRLAGHPGGTRMYYTLRREYYWPHLASDAFATVRNCTSWAATRGTLFKNQKDLRLFPAAGPMEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTHSIPLRTTTASVVASAFLDNWVYVYGAPRYMLTDNGPQFAAKFFDAVCALLGVRPYLTTAYHPQTNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPTGLILPGTVPQDAGTHMEDPRTPVQYKRATLRKLRDALDRARTKLTASQKQYKDNLDRKVRFRPVVRAGDFVYVDRPPRTLTSVERRMRVQSPTDTE----DLSVKLLPKAEGPFNVRSATDTTVLIEQDSVENRVSIDRVTKMP 800          
BLAST of Gchil1354.t1 vs. uniprot
Match: R7Q4X3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4X3_CHOCR)

HSP 1 Score: 414 bits (1063), Expect = 5.770e-136
Identity = 225/513 (43.86%), Postives = 298/513 (58.09%), Query Frame = 0
Query:  115 KVVPKALHTRVLYLAHYSQLSGHPGATRMYYTLKQQFYWPHMAHDVYTFVGQCESCVRTRGGIRKHRKYLKMFPAAGPLEFVAIDLLGPLRKTKNGYQHILVITDRFSKLTRAIPLKKTMSTTLAIAFLNNWVYPYGTPLYLLTDNSSNLASKFLEAVCNLFGIKHYFTTAYHPQTNGQVERFNHTLVSRLRHYTEEHQTGWDELVQPLTYSYNLQVHRSTQTTPFDLVLSRHPPGIV---------------------------SRLTAAQKRYKADYDRRVTKVVSVSSGQYVYIDNPPSGKRPRPGDEADDEAIDRDINSKLLPKSWGSYKVLNASNHTVTVEQDGIPNTISIDRITVAPETVQHRIEAGPSARKPRAVAQRTRPSEDPTPIEVNDDLQRDNPDYNPLTGTEMQPQTVTAEAPDPAPTHEAPNSEHMNPQGGVPPKDQDQTSEEFPVDRLVGHTQTYNGLKHTVRWYGWGPEGDTLEPPATILPHFRIRYWRLRKEQMPA 600
            +VVP  L  RVLYLAH+ +L+GHPGATRMYYTL++++YWPHMA D ++ V  C SC  TRG + K++K LK+FPAAGPL+FVA+DLLGPL KT +G QH+LVITDRFSKLTR+IPL+ T ++ +A AFL+NWVY YG P Y+LTDN    A+KF +AVC L G++HY TTAYHPQ+NGQ ERFN TLV RLRHY EEHQ  WD+ +QPLT++YN QVHRST+TTPFDLVL+R P G++                           ++L+A+QKRYK D+D++V     V +G +VY+D PP   RP         +++R   ++      G ++V +A++ TV +EQDG+ N +SIDR+T  P         GP      A+         P+  +                      QT T  A                               E+ VDR+VGH  T  G ++ VRWYG+    DT EP   +   F  RYWR R+ +  A
Sbjct:   42 RVVPTRLRPRVLYLAHHPRLAGHPGATRMYYTLRREYYWPHMASDAFSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLQFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYLQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLILPEDPRTPVQYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRPP---RPL-------TSVERRTRAQE-----GPFRVRSATDTTVLIEQDGVENRVSIDRVTKMPR--------GPGDTVASAI---------PSASDA---------------------QTTTPRA-------------------------------EYVVDRIVGHRMTRGGTEYKVRWYGYAASDDTYEPSEGLPQPFIDRYWRTRQGRTSA 470          
BLAST of Gchil1354.t1 vs. uniprot
Match: R7QR94_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR94_CHOCR)

HSP 1 Score: 423 bits (1088), Expect = 3.360e-135
Identity = 245/632 (38.77%), Postives = 341/632 (53.96%), Query Frame = 0
Query:    3 RLNTSGLETEPVDDDIPCFLVSSHQNGTGEHLEGCWDLPEEGALRNTDMATQILAIEETNVMPVTREEFLREKAQDAYCRTLADQIRFKGSLLDVDHIGYIMRRSTLDGSLQKVVPKALHTRVLYLAHYSQLSGHPGATRMYYTLKQQFYWPHMAHDVYTFVGQCESCVRTRGGIRKHRKYLKMFPAAGPLEFVAIDLLGPLRKTKNGYQHILVITDRFSKLTRAIPLKKTMSTTLAIAFLNNWVYPYGTPLYLLTDNSSNLASKFLEAVCNLFGIKHYFTTAYHPQTNGQVERFNHTLVSRLRHYTEEHQTGWDELVQPLTYSYNLQVHRSTQTTPFDLVLSRHPPGIV-------------------------------------SRLTAAQKRYKADYDRRVTKVVSVSSGQYVYIDNPPSGKRPRPGDEADDEAIDRDINSKLLPKSWGSYKVLNA--SNHTVTVEQDGIPNTISIDRITVAPETVQHRIEAGPSARKPRAVAQRTRPSEDPTPIEVNDDLQRDNPDYNPLTGTEMQPQTVTAEAPDPAPTHEAPNSEHMNPQGGVPPKDQDQTSEEFPVDRLVGHTQTYNG-LKHTVRWYGWGPEGDTLEPPATILPHFRIRYWRLR 594
            RL T+GL+T  + D+IPC+++                                         PV +++ +RE+  D+YC+ + +++   G+  +V+  G + RR+ LDGS+Q VVP +L  R+ +L+HY +L GHPG ++MY T+++ +YWPHMA DV   V  C SC R RG     +K L +FPAAGPLEFVA+DL GPL KT +G +H LVITDRF+KL RAIPL+ T +  +A  FL+ WVYPYG P  LLTDN     +KF EAVC   GI+H  TTAYHPQTNGQ ERFN TL +RLRHY  EHQ  WD+ VQPLTY+YN+QVH+ST TTPFDL+L+RHPPGI                                      ++LT AQ +YK ++D+ V  + S   GQ V++D PP        D +     + D + KLLPK+ G Y+V+ A     TVT+E++G+ + +SI+R+T  P   Q  +   PS+ +   +A    P+   TP E    + R  P             TV+ +     P H+ P                 +   E  +DR+V H +  +G L + VRW+G+ P+ DT E  A  LP   IR +R R
Sbjct:  273 RLETTGLDTSTLRDEIPCYIL-----------------------------------------PVMQDDLIREQKTDSYCKAMMEEVGKSGTQFEVNQHGLLCRRAPLDGSIQIVVPASLRARISFLSHYPRLQGHPGTSKMYETMRRLYYWPHMASDVQQTVADCRSCARVRGTQYSQQKKLTLFPAAGPLEFVAMDLYGPLPKTPHGNRHKLVITDRFTKLCRAIPLRTTQAQQVAQTFLDAWVYPYGMPDTLLTDNGPQFTAKFFEAVCGPLGIRHVLTTAYHPQTNGQAERFNRTLATRLRHYVSEHQRDWDDYVQPLTYAYNMQVHKSTSTTPFDLILTRHPPGISVQAPSSAIPSPNGSEPTSAQMKPITLQRVRKILSRAGTKLTHAQAQYKRNFDKAVRTLPSFEVGQEVFLDRPP--------DFSATPLENEDGHRKLLPKTTGPYRVIKAPVGGDTVTIERNGLLDAVSINRVTKVP---QPSVPKAPSSVRSTPMA--IPPASGTTPPE-RASVSRTTP-------------TVSIDPDSEVPVHQDPAEA--------------EADTEHAIDRIVAHGEADDGSLLYHVRWFGYSPKEDTWER-ADNLPENFIRRYRAR 821          
BLAST of Gchil1354.t1 vs. uniprot
Match: R7QJ93_CHOCR (Integrase catalytic domain-containing protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ93_CHOCR)

HSP 1 Score: 392 bits (1007), Expect = 3.070e-125
Identity = 215/504 (42.66%), Postives = 291/504 (57.74%), Query Frame = 0
Query:    1 MSRLNTSGLETEPVDDDIPCFLVS---SHQNGTGEHLEGCWDLPEEGALRNTDMATQILAIEETNVMPVTREEFLREKAQDAYCRTLADQIRFKGSLLDVDHIGYIMRRSTLDGSLQKVVPKALHTRVLYLAHYSQLSGHPGATRMYYTLKQQFYWPHMAHDVYTFVGQCESCVRTRGGIRKHRKYLKMFPAAGPLEFVAIDLLGPLRKTKNGYQHILVITDRFSKLTRAIPLKKTMSTTLAIAFLNNWVYPYGTPLYLLTDNSSNLASKFLEAVCNLFGIKHYFTTAYHPQTNGQVERFNHTLVSRLRHYTEEHQTGWDELVQPLTYSYNLQVHRSTQTTPFDLVLSRHPPGIVS--------------------------------------RLTAAQKRYKADYDRRVTKVVSVSSGQYVYIDNPPSGKRPRPGDEADD-EAIDRDINSKLLPKSWGSYKVLNASNHTVTVEQDGIPNTISIDRITVAPETVQHRIEAGPS 462
            +SRL   G  +EPVDD++PCF V      QN     +   W+ P +      + A  ++  EE +V  VT EEFLRE+A+D +C   A+ +    S  DV+  G+++R+S LDG+LQ+VVPK L  ++LYLAH+ +L+GHPG TRMYYTL++++YWPHMA+D ++                                            T +G +H+LV+TDRF+KLTR+IPL+ T ++ +A AFL+NWVY YG P Y+LTDN    A+KF +AVC L G++HY TTAYHPQTNGQ ERFN TLV RLRHY  EHQ  WDE +QPLT++YN QVHRST+TTPFDLVL+R P G+                                        +LTAAQ+RYKAD+D++V     +  G  VY+D PP   RP    E  D  + D   + KLLPK+ G ++V +A+  TV V+QDG+ N +SIDRIT  P   +    A P+
Sbjct:  181 VSRLRVDGATSEPVDDEVPCFAVQWREEEQNPRQGTVH--WETPVDPG--RAEHAFTVIP-EERDVSSVTVEEFLREQAEDPFCTAAAETVGNPDSRYDVERYGFVVRKSPLDGTLQRVVPKRLRAKILYLAHHPRLAGHPGGTRMYYTLRREYYWPHMANDAFS-------------------------------------------TTAHGNRHVLVMTDRFTKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYMLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQTNGQTERFNRTLVQRLRHYVAEHQRDWDEYIQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLALPGTVPQDAVSNTEDPRTPVQYKRATLRKLRDALERTRVKLTAAQRRYKADFDKKVRFRSVIQVGDLVYVDRPP---RPLTSTERGDLPSNDGGPSVKLLPKTEGPFRVRSATETTVVVDQDGVSNRVSIDRITRMPRGPRDVTTAAPT 633          
BLAST of Gchil1354.t1 vs. uniprot
Match: R7QMC5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMC5_CHOCR)

HSP 1 Score: 387 bits (993), Expect = 4.670e-121
Identity = 182/304 (59.87%), Postives = 231/304 (75.99%), Query Frame = 0
Query:   56 LAIEETNVMPVTREEFLREKAQDAYCRTLADQIRFKGSLLDVDHIGYIMRRSTLDGSLQKVVPKALHTRVLYLAHYSQLSGHPGATRMYYTLKQQFYWPHMAHDVYTFVGQCESCVRTRGGIRKHRKYLKMFPAAGPLEFVAIDLLGPLRKTKNGYQHILVITDRFSKLTRAIPLKKTMSTTLAIAFLNNWVYPYGTPLYLLTDNSSNLASKFLEAVCNLFGIKHYFTTAYHPQTNGQVERFNHTLVSRLRHYTEEHQTGWDELVQPLTYSYNLQVHRSTQTTPFDLVLSRHPPGIVSRLTAAQ 359
            L I+  +  PV  EEFLRE+A+DA+CR  A+ +    S  D+D  G+++R S L G+LQ+VVP  L  RVLYL H+ +L+GHPGATRMYYTL++++YWPHMA D ++ V  C SC  TRG + K++K LK+FPAAGPLEFVA+DLLGPL KT +G QH+LVITDRFSKLTR+IPL+ T ++ +A AFL+NWVY YG P Y+LTDN    A+KF +AVC L G++HY TTAYHPQ+ GQ ERFN TLV RLRH  E+HQ  WD+ VQPLT++YN QVHRST+TTPFDLVL+R P G++   T  Q
Sbjct:  468 LRIDGGDTEPVDDEEFLREQAEDAFCRFAAETVGTPNSKFDIDRYGFLVRTSPLGGTLQRVVPTRLRPRVLYLTHHPRLAGHPGATRMYYTLRREYYWPHMASDAFSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQSKGQTERFNRTLVQRLRHLVEDHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPCGLILPGTVPQ 771          
BLAST of Gchil1354.t1 vs. uniprot
Match: R7Q2U6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2U6_CHOCR)

HSP 1 Score: 329 bits (844), Expect = 1.320e-103
Identity = 198/479 (41.34%), Postives = 258/479 (53.86%), Query Frame = 0
Query:  156 MAHDVYTFVGQCESCVRTRGGIRKHRKYLKMFPAAGPLEFVAIDLLGPLRKTKNGYQHILVITDRFSKLTRAIPLKKTMSTTLAIAFLNNWVYPYGTPLYLLTDNSSNLASKFLEAVCNLFGIKHYFTTAYHPQTNGQVERFNHTLVSRLRHYTEEHQTGWDELVQPLTYSYNLQVHRSTQTTPFDLVLSRHPPGIV-------------------------------------SRLTAAQKRYKADYDRRVTKVVSVSSGQYVYIDNPPSGKRPRPGDEADDEAIDRDINSKLLPKSWGSYKVLNA--SNHTVTVEQDGIPNTISIDRITVAPETVQHRIEAGPSARKPRAVAQRTRPSEDPTPIEVNDDLQRDNPDYNPLTGTEMQPQTVTAEAPDPAPTHEAPNSEHMNPQGGVPPKDQDQTSEEFPVDRLVGHTQTYNGLK-HTVRWYGWGPEGDTLEPPATILPHFRIRYWRLR 594
            MA DV   V  C SC R RG   + +K L +FPAAGPLEFVA+DL GPL KT +G +HILVITDRF+KL RAIPL+ T +  +A  FL+ WVYPYG P  LLTDN     +KF EAVC L GI+H  TTAYHPQTNGQ ERFN TL +RLRHY  EHQ  WD+ VQPLTY+YN+QVH+ST TTPFDLVL+RHPPGI                                      ++LT AQ +YK ++D+ V  + S   GQ V++D PP        D +     + D + KLLPK+ G Y+ + A     TVT+E++G+ + +SI+R+T  P   Q  I   PS+ +   +A    P+   TP E                      +TV+ +     P H+ P                 +   E  +DR+V H +  +G   + VRW+G+ P+ DT E  A  LP   IR +R R
Sbjct:    1 MASDVQQTVADCRSCARVRGTQYRQQKKLTLFPAAGPLEFVAMDLYGPLPKTPHGNRHILVITDRFTKLCRAIPLRTTQAQQVAQTFLDAWVYPYGMPDTLLTDNGPQFTAKFFEAVCGLLGIRHVLTTAYHPQTNGQAERFNRTLATRLRHYVSEHQRDWDDYVQPLTYAYNMQVHKSTGTTPFDLVLTRHPPGISVQAPSSAIPSPNGSEPTSAQMKRITLQRVRKILSRAGTKLTHAQAQYKRNFDKAVRTLPSFEVGQEVFLDRPP--------DFSATPLENEDGHRKLLPKTTGPYRFIKAPVDGDTVTIERNGLLDAVSINRVTKVP---QPSIPKAPSSVRSTPMA--IPPASGTTPPEK--------------ASVSRTTRTVSIDPDSEVPVHQDPAEA--------------EADTEHAIDRIVAHGEADDGSPLYRVRWFGYSPKEDTWER-ADNLPENFIRRYRAR 437          
BLAST of Gchil1354.t1 vs. uniprot
Match: R7QU67_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QU67_CHOCR)

HSP 1 Score: 323 bits (827), Expect = 5.470e-102
Identity = 187/431 (43.39%), Postives = 234/431 (54.29%), Query Frame = 0
Query:  184 LKMFPAAGPLEFVAIDLLGPLRKTKNGYQHILVITDRFSKLTRAIPLKKTMSTTLAIAFLNNWVYPYGTPLYLLTDNSSNLASKFLEAVCNLFGIKHYFTTAYHPQTNGQVERFNHTLVSRLRHYTEEHQTGWDELVQPLTYSYNLQVHRSTQTTPFDLVLSRHPPGIVS--------------------------------------RLTAAQKRYKADYDRRVTKVVSVSSGQYVYIDNPPSGKRPRPGDEADDEAIDRD-INSKLLPKSWGSYKVLNASNHTVTVEQDGIPNTISIDRITVAPETVQHRIEAGPSARKPRAVAQRTRPSEDPTPIEVNDDLQRDNPDYNPLTGTEMQPQTVTAEAPDPAPTHEAPNSEHMNPQGGVPPKDQDQTSEEFPVDRLVGHTQTYNGLKHTVRWYGWGPEGDT 575
            +K+FPAAGPLEFVA+DLLGPL KT +G Q +LVITDRFS+LTR+I L+ T +  +  AFL NWVY YG P Y+LTDN    A+KF +AVC L GI HY TTAYHPQTNGQ ERFN T+V RLRHY EEHQ  WDE +QPL Y+YN+QVHRST+TTPFDLVL+R P G+                                        ++TAAQKRYK ++D++V     +  G  VY+D PP   R       D + +  D ++ KLLPK+ G ++V  A++ TVTVEQD +P  +SIDR+T                R PR +  RT P+E                                  AP          SE +NP  G    D   T EEF V+ LV H     GL++ VRWYG+ P  DT
Sbjct:    1 MKLFPAAGPLEFVAMDLLGPLPKTAHGNQFVLVITDRFSRLTRSIALRTTTTAVVTNAFLENWVYVYGAPQYVLTDNGPQFAAKFFDAVCALLGIHHYLTTAYHPQTNGQTERFNKTIVQRLRHYVEEHQRDWDEFLQPLAYAYNIQVHRSTETTPFDLVLTRQPSGLTVAGTAPQAAGVAHDDPRTPVQYKRATLRKLRDVLDRARVKMTAAQKRYKENFDKKVRFRPVIQEGDQVYVDRPPPALRAAERRGRDGQGLGTDDMSVKLLPKTEGPFRVRKATDTTVTVEQDRLPVPVSIDRVT----------------RMPRGLGDRTMPTEG-------------------------------ISAP----------SERINPPHG----DGANTPEEFVVELLVAHRDIPTGLEYKVRWYGYIPADDT 370          
BLAST of Gchil1354.t1 vs. uniprot
Match: R7QLW9_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QLW9_CHOCR)

HSP 1 Score: 318 bits (816), Expect = 1.420e-97
Identity = 164/354 (46.33%), Postives = 217/354 (61.30%), Query Frame = 0
Query:   55 ILAIEETNVMPVTREEFLREKAQDAYCRTLADQI-RFKGSLLDVDHIGYIMRRSTLDGSLQKVVPKALHTRVLYLAHYSQLSGHPGATRMYYTLKQQFYWPHMAHDVYTFVGQCESCVRTRGGIRKHRKYLKMFPAAGPLEFVAIDLLGPLRKTKNGYQHILVITDRFSKLTRAIPLKKTMSTTLAIAFLNNWVYPYGTPLYLLTDNSSNLASKFLEAVCNLFGIKHYFTTAYHPQTNGQVERFNHTLVSRLRHYTEEHQTGWDELVQPLTYSYNLQVHRSTQTTPFDLVLSRHP--------------------------------PGIVSRLTAAQKRYKADYDRRVTKVVS 375
            ++  E T + PV  EE +  +A D YC+ L +++   + S  DV   G ++R + LD   Q VVP  L  +  YL HY++ SGHPG T+M YT+++ FYWP MA + +  + QC+SC R R  +RKH  +LK+FPA  PLEFVA+ +LGPL ++    Q++LVI+D+F K+TRAIPLK   S T+A AF+ NW+YPYG P YLL+DN    ASKF + +C + GI++ FTTAYHPQTNGQVERFN T++S +RHY  EHQ   DE   PLTY+YN QVHRST  TPF+LV SR P                                 G    L AAQ RYK +YD+ V K+ S
Sbjct:  215 VVNAENTYLSPVRIEELVISQANDRYCQMLKEKVDNEETSRFDVFDRGLLVRIAPLDDCRQIVVPTMLRQKGFYLCHYTRTSGHPGDTKMLYTMRRTFYWPSMALECHACMRQCDSCARERVQLRKHSTFLKLFPARRPLEFVAMGILGPLPRSTKRNQYLLVISDQFPKMTRAIPLKSITSMTVARAFVENWIYPYGPPAYLLSDNGGQFASKFFQKICQIMGIRNLFTTAYHPQTNGQVERFNQTILSGIRHYVVEHQKTRDEYCGPLTYAYNTQVHRSTGCTPFELVFSRPPGPMALEYTPENGTMPETRHERMRLMEHLTRLIQGATKTLQAAQARYKENYDKHVRKIAS 568          
BLAST of Gchil1354.t1 vs. uniprot
Match: R7Q5S0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5S0_CHOCR)

HSP 1 Score: 318 bits (814), Expect = 3.600e-95
Identity = 171/420 (40.71%), Postives = 239/420 (56.90%), Query Frame = 0
Query:   66 VTREEFLREKAQDAYCRT-LADQIRFKGSLLDVDHIGYIMRRSTLDGSL-QKVVPKALHTRVLYLAHYSQLSGHPGATRMYYTLKQQFYWPHMAHDVYTFVGQCESCVRTRGGIRKHRKYLKMFPAAGPLEFVAIDLLGPLRKTKNGYQHILVITDRFSKLTRAIPLKKTMSTTLAIAFLNNWVYPYGTPLYLLTDNSSNLASKFLEAVCNLFGIKHYFTTAYHPQTNGQVERFNHTLVSRLRHYTEEHQTGWDELVQPLTYSYNLQVHRSTQTTPFDLVLSRHPPGIVSR--------------------------------LTAAQKRYKADYDRRVTKVVS-VSSGQYVYIDNPPSGKRPRPGDEADDEAIDRDINSKLLPKSWGSYKVLNASNHTVTVEQDGIPNTISIDRITVAP 450
            +T EE   EK  D +C+T LA +   + S    DH G + RR   D ++ Q VVP+ L   +L L H   ++GHPG  RMYY L++++YWPH+A DV   V  C +C      +RKH   L++FPA  PLE +AID+LGPL KTK+G + +LVITDRFSKLT+ +  +   + T+A+AF  +WV+ YG P  LL+DN     +KF  + C + GI + +T+AYHPQTNGQVER+N T+ + LR+Y  EHQ  WD  V PLTY+YN  VHR+T TTPF+LVLSR PP    R                                L   Q RYK D+D+R+ ++ S +  G+YVY+ NP  G +                ++KL   + G Y+VL   + T+T+++DG+   +S DR   AP
Sbjct:  290 LTIEEIAEEKRVDDFCQTVLARRSESRDSAFLEDHQGVLKRRHPFDPAIVQVVVPRTLRAGLLSLCHNPVIAGHPGQNRMYYALRREYYWPHLAADVAATVRGCRTCAMNPVKLRKHLNRLRLFPATRPLESLAIDILGPLPKTKSGKRFLLVITDRFSKLTQVVAFRTITAYTVAVAFCESWVFKYGVPRTLLSDNGPQFNAKFFHSTCRVLGITNMYTSAYHPQTNGQVERYNRTIAAMLRNYVGEHQDDWDMYVGPLTYAYNSHVHRTTNTTPFELVLSRPPPEFSLRRIDGDVAPADRGNQRAEFLKTLNSTIQRAYGSLRRTQARYKRDFDKRIRRINSRLHPGEYVYL-NPTDGGK---------------TSNKLASPAVGPYRVLANDHRTITIDRDGVTERVSADRCVYAP 693          
The following BLAST results are available for this feature:
BLAST of Gchil1354.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QN04_CHOCR5.180e-16142.83Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QLF2_CHOCR9.230e-15148.28Integrase catalytic domain-containing protein n=1 ... [more]
R7Q4X3_CHOCR5.770e-13643.86Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QR94_CHOCR3.360e-13538.77Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QJ93_CHOCR3.070e-12542.66Integrase catalytic domain-containing protein n=3 ... [more]
R7QMC5_CHOCR4.670e-12159.87Integrase catalytic domain-containing protein n=1 ... [more]
R7Q2U6_CHOCR1.320e-10341.34Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QU67_CHOCR5.470e-10243.39Integrase catalytic domain-containing protein n=1 ... [more]
R7QLW9_CHOCR1.420e-9746.33Integrase catalytic domain-containing protein n=2 ... [more]
R7Q5S0_CHOCR3.600e-9540.71Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 117..173
e-value: 2.5E-16
score: 59.5
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 191..288
e-value: 8.0E-12
score: 45.3
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 188..347
score: 26.573305
NoneNo IPR availableGENE3D1.10.340.70coord: 97..173
e-value: 5.1E-16
score: 60.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..552
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..508
NoneNo IPR availablePANTHERPTHR45835YALI0A06105Pcoord: 120..353
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 186..375
e-value: 4.5E-48
score: 165.2
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 522..594
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 187..343

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:896370..898283 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1354.t1Gchil1354.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 896370..898283 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1354.t1 ID=Gchil1354.t1|Name=Gchil1354.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=603bp
MSRLNTSGLETEPVDDDIPCFLVSSHQNGTGEHLEGCWDLPEEGALRNTD
MATQILAIEETNVMPVTREEFLREKAQDAYCRTLADQIRFKGSLLDVDHI
GYIMRRSTLDGSLQKVVPKALHTRVLYLAHYSQLSGHPGATRMYYTLKQQ
FYWPHMAHDVYTFVGQCESCVRTRGGIRKHRKYLKMFPAAGPLEFVAIDL
LGPLRKTKNGYQHILVITDRFSKLTRAIPLKKTMSTTLAIAFLNNWVYPY
GTPLYLLTDNSSNLASKFLEAVCNLFGIKHYFTTAYHPQTNGQVERFNHT
LVSRLRHYTEEHQTGWDELVQPLTYSYNLQVHRSTQTTPFDLVLSRHPPG
IVSRLTAAQKRYKADYDRRVTKVVSVSSGQYVYIDNPPSGKRPRPGDEAD
DEAIDRDINSKLLPKSWGSYKVLNASNHTVTVEQDGIPNTISIDRITVAP
ETVQHRIEAGPSARKPRAVAQRTRPSEDPTPIEVNDDLQRDNPDYNPLTG
TEMQPQTVTAEAPDPAPTHEAPNSEHMNPQGGVPPKDQDQTSEEFPVDRL
VGHTQTYNGLKHTVRWYGWGPEGDTLEPPATILPHFRIRYWRLRKEQMPA
DG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041588Integrase_H2C2
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR016197Chromo-like_dom_sf
IPR012337RNaseH-like_sf