Gchil1350.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1350.t1
Unique NameGchil1350.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length185
Homology
BLAST of Gchil1350.t1 vs. uniprot
Match: A0A2V3IKH8_9FLOR (Female germline-specific tumor suppressor gld-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKH8_9FLOR)

HSP 1 Score: 169 bits (427), Expect = 9.090e-48
Identity = 112/246 (45.53%), Postives = 127/246 (51.63%), Query Frame = 0
Query:    1 MIRGKGSIRKDKEPDVRGKPGWQHVFNEPLHVVIEPPHTLPEPAASAALSRATEAVELLLVPVPEERDALKRHQLRALAIMNGTFRAAR------PYTPDSHLLPP-----------------------------------PCSSSFAARLAHTAVPTTQVKVVAS---------------------------------------SALSAGGFIGREFYNGAFSNEALLASSARSAWEQVPSSSPP 166
            MIRGKGSIRKDKEPDVRGKPGW+HVFNEPLHVVIE P  L EP+ASAAL+RA +AVELLLVPVPEERDALKRHQLRALAIMNGT+R A       PY  +S  L P                                    CS   +  L +     T+++  AS                                       +AL  GGF+G EFYNGAFSN    ASS  + W+Q  SSS P
Sbjct:  115 MIRGKGSIRKDKEPDVRGKPGWEHVFNEPLHVVIEAPDGLQEPSASAALARAADAVELLLVPVPEERDALKRHQLRALAIMNGTYRGAPHAQYPIPYPIESEPLAPLPSPILSAYDSLSMLLEPTASLRKSPSSTDHFVDGACSIPVSTPLVNLPTLNTKLRAAASLDEFGSSSVGDDTPESSHGSEHDDAAPSTSASNLKLPTGTALGVGGFMGHEFYNGAFSNG---ASSPTTTWDQTVSSSAP 357          
BLAST of Gchil1350.t1 vs. uniprot
Match: A0A7S0BGQ7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BGQ7_9RHOD)

HSP 1 Score: 132 bits (333), Expect = 4.790e-34
Identity = 66/86 (76.74%), Postives = 73/86 (84.88%), Query Frame = 0
Query:    1 MIRGKGSIRKDKEPDVRGKPGWQHVFNEPLHVVIEPPHTLPEPAASAALSRATEAVELLLVPVPEERDALKRHQLRALAIMNGTFR 86
            MIRG+GSIRKDKE +VRGKPGW+HVFNEPLHVVIE      EP AS AL+RA EA+ELLLVPVPEE D+LKR QLR LAI+NGTFR
Sbjct:  139 MIRGRGSIRKDKETEVRGKPGWEHVFNEPLHVVIEA--DFEEPHASRALNRAKEAIELLLVPVPEENDSLKRQQLRDLAILNGTFR 222          
BLAST of Gchil1350.t1 vs. uniprot
Match: A0A7S1T622_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T622_9RHOD)

HSP 1 Score: 132 bits (331), Expect = 4.200e-33
Identity = 67/95 (70.53%), Postives = 77/95 (81.05%), Query Frame = 0
Query:    1 MIRGKGSIRKDKEPDVRGKPGWQHVFNEPLHVVIEPPHTLPEPAASAALSRATEAVELLLVPVPEERDALKRHQLRALAIMNGTFRAARPYTPDS 95
            MIRG+GSIRKDKE +VRGKPGW+HVFNEPLHVVIE    + E +A+ AL+RA EAVELLLVPVPE+RD+LKR QLR LAI+NGTFR      P S
Sbjct:  182 MIRGRGSIRKDKEIEVRGKPGWEHVFNEPLHVVIEA--EMDEISATRALNRAKEAVELLLVPVPEDRDSLKRQQLRELAILNGTFRGGALTQPHS 274          
BLAST of Gchil1350.t1 vs. uniprot
Match: A0A7S0ZJQ1_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJQ1_9RHOD)

HSP 1 Score: 129 bits (325), Expect = 1.560e-32
Identity = 63/88 (71.59%), Postives = 72/88 (81.82%), Query Frame = 0
Query:    1 MIRGKGSIRKDKEPDVRGKPGWQHVFNEPLHVVIEPPHTLPEPAASAALSRATEAVELLLVPVPEERDALKRHQLRALAIMNGTFRAA 88
            MIRG+GSIRKDKE +VRGKPGW+HVFNEPLHVVIE      +     AL+RA EAVELLLVPVPE+RD+LKR QLR LAI+NGTFR +
Sbjct:  250 MIRGRGSIRKDKEGEVRGKPGWEHVFNEPLHVVIEADSMEDDAVCHRALNRAREAVELLLVPVPEDRDSLKRQQLRDLAILNGTFRGS 337          
BLAST of Gchil1350.t1 vs. uniprot
Match: M2XRR5_GALSU (RNA-binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRR5_GALSU)

HSP 1 Score: 129 bits (325), Expect = 2.070e-32
Identity = 63/86 (73.26%), Postives = 74/86 (86.05%), Query Frame = 0
Query:    1 MIRGKGSIRKDKEPDVRGKPGWQHVFNEPLHVVIEPPHTLPEPAASAALSRATEAVELLLVPVPEERDALKRHQLRALAIMNGTFR 86
            MIRGKGSIRKDKE +VRGKPGW+HVFNEPLHVV+E    + E +A  AL+RA E++ELLLVPVPEE+D+LKR QLR LAI+NGTFR
Sbjct:  119 MIRGKGSIRKDKENEVRGKPGWEHVFNEPLHVVVEA--EMDEASALVALNRAKESIELLLVPVPEEKDSLKRQQLRDLAILNGTFR 202          
BLAST of Gchil1350.t1 vs. uniprot
Match: A0A5J4Z4E7_PORPP (Protein quaking-A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4E7_PORPP)

HSP 1 Score: 130 bits (328), Expect = 2.290e-32
Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = 0
Query:    1 MIRGKGSIRKDKEPDVRGKPGWQHVFNEPLHVVIEPPHTLPEPAASAALSRATEAVELLLVPVPEERDALKRHQLRALAIMNGTFR 86
            MIRGKGSIRKDKE +VRGKPGW+HVFNEPLHVV+E  +   E  A+ AL+RA EAVELLLVPVPE+RD+LKR QLR LAI+NGTFR
Sbjct:  234 MIRGKGSIRKDKEMEVRGKPGWEHVFNEPLHVVVEAENE--EAVATRALNRAKEAVELLLVPVPEDRDSLKRQQLRDLAILNGTFR 317          
BLAST of Gchil1350.t1 vs. uniprot
Match: A0A1X6NLT3_PORUM (KH domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLT3_PORUM)

HSP 1 Score: 126 bits (317), Expect = 1.450e-30
Identity = 64/88 (72.73%), Postives = 72/88 (81.82%), Query Frame = 0
Query:    1 MIRGKGSIRKDKEPDVRGKPGWQHVFNEPLHVVIEPPHTLPEPAASAALSRATEAVELLLVPVPEERDALKRHQLRALAIMNGTFRAA 88
            MIRGKGSIR+DKE DVRGKPGW+HVF +PLHV+IE      E A + AL+RA EAVELLLVPVPEERD+LKR QLR LAI+NG  RAA
Sbjct:  375 MIRGKGSIRRDKEADVRGKPGWEHVFQDPLHVIIES-EGADEAATTRALTRAKEAVELLLVPVPEERDSLKRQQLRDLAIINGACRAA 461          
BLAST of Gchil1350.t1 vs. uniprot
Match: A0A7S1XEW8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEW8_9RHOD)

HSP 1 Score: 119 bits (299), Expect = 2.060e-30
Identity = 56/86 (65.12%), Postives = 72/86 (83.72%), Query Frame = 0
Query:    1 MIRGKGSIRKDKEPDVRGKPGWQHVFNEPLHVVIEPPHTLPEPAASAALSRATEAVELLLVPVPEERDALKRHQLRALAIMNGTFR 86
            +IRGKGS+RK++E +V GKPGW+HVF +PLHV+IE   T  +  A  AL+RA EA+ELLLVPVP+++D+LKRHQLR LAI+NGTFR
Sbjct:   53 LIRGKGSVRKEREAEVVGKPGWEHVFTDPLHVIIESSST--DAHAQKALNRAKEAIELLLVPVPDDQDSLKRHQLRELAIINGTFR 136          
BLAST of Gchil1350.t1 vs. uniprot
Match: A0A2V3IN56_9FLOR (Female germline-specific tumor suppressor gld-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN56_9FLOR)

HSP 1 Score: 125 bits (314), Expect = 4.050e-30
Identity = 61/87 (70.11%), Postives = 72/87 (82.76%), Query Frame = 0
Query:    1 MIRGKGSIRKDKEPDVRGKPGWQHVFNEPLHVVIEPPHTLPEPAASAALSRATEAVELLLVPVPEERDALKRHQLRALAIMNGTFRA 87
            MIRGKGSIRKDKE DVRGKPGW+HVFNEPLHVVIE   +  E +A+  L+ A + VE+LL+PVPEERD+LKR QLR LAI+NGT R+
Sbjct:  115 MIRGKGSIRKDKEADVRGKPGWEHVFNEPLHVVIEVVDSPDELSATRILAHAKQLVEMLLIPVPEERDSLKRAQLRDLAILNGTHRS 201          
BLAST of Gchil1350.t1 vs. uniprot
Match: A0A7J7IBG4_9RHOD (KH domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IBG4_9RHOD)

HSP 1 Score: 125 bits (314), Expect = 4.840e-30
Identity = 63/105 (60.00%), Postives = 75/105 (71.43%), Query Frame = 0
Query:    1 MIRGKGSIRKDKEPDVRGKPGWQHVFNEPLHVVIEPPHTLPEPAASAALSRATEAVELLLVPVPEERDALKRHQLRALAIMNGTFRAARPYTPDSHLLPPPCSSS 105
            MIRGKGSIRKDKE +VRGKPGW+HVF+EPLHV++E    + E  A  AL RA E VELLL+PVPE+RD LKR QLR LAI+NGT R + P        P   ++S
Sbjct:  542 MIRGKGSIRKDKESEVRGKPGWEHVFSEPLHVILEA--EMEESQADYALERAKELVELLLIPVPEDRDTLKREQLRELAILNGTLRCSWPGNESGSAAPTTTTAS 644          
The following BLAST results are available for this feature:
BLAST of Gchil1350.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKH8_9FLOR9.090e-4845.53Female germline-specific tumor suppressor gld-1 n=... [more]
A0A7S0BGQ7_9RHOD4.790e-3476.74Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S1T622_9RHOD4.200e-3370.53Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0ZJQ1_9RHOD1.560e-3271.59Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
M2XRR5_GALSU2.070e-3273.26RNA-binding protein n=1 Tax=Galdieria sulphuraria ... [more]
A0A5J4Z4E7_PORPP2.290e-3275.58Protein quaking-A n=1 Tax=Porphyridium purpureum T... [more]
A0A1X6NLT3_PORUM1.450e-3072.73KH domain-containing protein n=1 Tax=Porphyra umbi... [more]
A0A7S1XEW8_9RHOD2.060e-3065.12Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A2V3IN56_9FLOR4.050e-3070.11Female germline-specific tumor suppressor gld-1 n=... [more]
A0A7J7IBG4_9RHOD4.840e-3060.00KH domain-containing protein n=1 Tax=Cyanidiococcu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 1..94
e-value: 2.2E-23
score: 85.3
IPR031119STAR-domain RNA-binding protein GLD1-likePANTHERPTHR11208:SF125PROTEIN QUAKINGcoord: 1..89
IPR045071KH domain-containing BBP-likePANTHERPTHR11208RNA-BINDING PROTEIN RELATEDcoord: 1..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:876684..877238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1350.t1Gchil1350.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 876684..877238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1350.t1 ID=Gchil1350.t1|Name=Gchil1350.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=185bp
MIRGKGSIRKDKEPDVRGKPGWQHVFNEPLHVVIEPPHTLPEPAASAALS
RATEAVELLLVPVPEERDALKRHQLRALAIMNGTFRAARPYTPDSHLLPP
PCSSSFAARLAHTAVPTTQVKVVASSALSAGGFIGREFYNGAFSNEALLA
SSARSAWEQVPSSSPPVSVSVTPSTSLFDESPRY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf
IPR031119GLD1-like
IPR045071BBP-like