Gchil1346.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1346.t1
Unique NameGchil1346.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length219
Homology
BLAST of Gchil1346.t1 vs. uniprot
Match: A0A318SWK6_9HYPH (Alanine dehydrogenase n=1 Tax=Phyllobacterium leguminum TaxID=314237 RepID=A0A318SWK6_9HYPH)

HSP 1 Score: 93.2 bits (230), Expect = 8.550e-19
Identity = 61/207 (29.47%), Postives = 116/207 (56.04%), Query Frame = 0
Query:    4 RSNLRIFMFGSGKVAQEIARMLNQCFCKKISTLTMCSPNSSPC--VVEFLKKTPGWSLCIIPNTEVNYASLKQANLVITVTSNTADAGPLMKSKDDMRDDVVALNLACNELPMDFIHKTLKQGTMICDDVQLVHERCGQSLTNYFNRNGKTLADEALNYSIRNLAEFIPNNYPNTKPVNGHTNKKPACVTCSGMGALDVWVALKLLK 208
            RS++ +F+FG+G +A++I   L++C  K I  L + S        +   + +  G+   +IP   +N+  +++ + +IT ++  ADA P+ ++  D   D + L+L  +E P  F+ + ++ GT++CD+V++V  R  QSL  YF+R+G TL   A    IR+L++ I +  P+ +P      + P  +TC G+  LD++V   + +
Sbjct:  156 RSDISVFLFGAGPIAEKIILALDKCCGKSIRRLFVSSRTGKGAAQLAASIARKVGYE--VIP--VLNHEMVRECDFIITASN--ADA-PVFEA--DEIGDALVLHLGGDETPTAFLQRAIRSGTVLCDNVEMVSHRASQSLAFYFSRHGATLEQLAAPLGIRSLSDVIED--PDFQP------ETPIHITCVGLPMLDLYVGAHIYE 345          
BLAST of Gchil1346.t1 vs. uniprot
Match: UPI001CD7291C (ornithine cyclodeaminase n=2 Tax=Ensifer TaxID=106591 RepID=UPI001CD7291C)

HSP 1 Score: 75.1 bits (183), Expect = 2.640e-12
Identity = 58/217 (26.73%), Postives = 103/217 (47.47%), Query Frame = 0
Query:    3 QRSNLRIFMFGSGKVAQEIARMLNQCFCKKISTLTMCSPN--SSPCVVEFLKKTPGWSLCIIPNTEVNYASLKQANLVITVTSNTADAGPLMKSKDDMRDDVVALNLACNELPMDFIHKTLKQGTMICDDVQLVHERCGQSLTNYFNRNGKTLADEALNYSIRNLAEFIPNNYPNTKPVNGHTNKKPACVTCSGMGALDVWVALKL----LKAIAEM 213
            Q + L +F+FG+G +A++I ++        IS + + S +  S+  +VE L  T    L  + +  +    L+    VIT +++ A    +    +D+  + V L+L  +E P  +I   L+ G  +CDD+ +V  R  QSL  YF+R G TL        ++++ +    +            + P  VTC G+  LD++VA  +    L+  AEM
Sbjct:  149 QPTELSVFLFGAGPIAEQIVKVFGHFGTGIISKIYVRSRSGVSARRLVEGLATTHEIPLEAVEDNRM----LRDCRFVITASNSNAPVYQM----EDISPNAVVLHLGGDETPAGYIQHVLRTGVALCDDISMVSRRNSQSLALYFSRMGSTLEQLGPALGVKSIKDCFDTSL---------VAEGPILVTCVGLPVLDLYVAAHVYETWLRPDAEM 348          
The following BLAST results are available for this feature:
BLAST of Gchil1346.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A318SWK6_9HYPH8.550e-1929.47Alanine dehydrogenase n=1 Tax=Phyllobacterium legu... [more]
UPI001CD7291C2.640e-1226.73ornithine cyclodeaminase n=2 Tax=Ensifer TaxID=106... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 7..167
e-value: 3.1E-6
score: 29.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:801618..803029 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1346.t1Gchil1346.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 801618..803029 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1346.t1 ID=Gchil1346.t1|Name=Gchil1346.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=219bp
MLQRSNLRIFMFGSGKVAQEIARMLNQCFCKKISTLTMCSPNSSPCVVEF
LKKTPGWSLCIIPNTEVNYASLKQANLVITVTSNTADAGPLMKSKDDMRD
DVVALNLACNELPMDFIHKTLKQGTMICDDVQLVHERCGQSLTNYFNRNG
KTLADEALNYSIRNLAEFIPNNYPNTKPVNGHTNKKPACVTCSGMGALDV
WVALKLLKAIAEMKGGII*
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