Gchil1324.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1324.t1
Unique NameGchil1324.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length300
Homology
BLAST of Gchil1324.t1 vs. uniprot
Match: A0A2V3J4P6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4P6_9FLOR)

HSP 1 Score: 286 bits (731), Expect = 5.550e-93
Identity = 150/301 (49.83%), Postives = 207/301 (68.77%), Query Frame = 0
Query:    1 MKLPNVPVVSGTILSALVLLLFVSGRYESLIPQLR-SPTEG-EALLLDENPSLSTRNTSKLPDLPSSPAEHLTCVVYERPPRTGSTTIGEALERCLLHLGYKQPVWKGFQARSMVISDMLQQPYERVMAVTRHFYMNGTALRQLRNRCESLLYITSTATMKQRLWSLVKYRQLQTHGNTSLSKEQVQLAIEELKREKAQIKILNSYPYLYSNGTAVDVEGDERIVPDYVIRKSMLVDDVSDLLHAFGCSSRVISQNVHRARHDEVLDAIDIDDNDSLHTRLLQRAEERNEFGLKKASNFGR 299
            MK  N P+V  T+   L++LL VSG+Y  L+PQL  S T+  E   L    SLS+ +T               CV+Y+RPPRT STTIG ALE+CL  LGY+QP W+G   RS+++ +ML+ P+ERV  + RHFYMN T+L +LR  C++L YITSTA MK+RLWSLVKYRQ+  HGN+SL++ Q+  A+++L++E  QI++LN+YPYL ++ T ++    + I PDYVIRKS L +D+S LL AFGC +R +S+N+H   H   LD I IDD+D LH R+L+ A +RN+ GLKKA++F R
Sbjct:    1 MKSSNAPIVVVTLFVLLIVLL-VSGQYTHLLPQLTLSDTDSPEQQFLSHGSSLSSPHT---------------CVIYDRPPRTASTTIGNALEKCLEPLGYEQPDWQGMDGRSLMVLNMLRLPFERVSLLARHFYMNSTSLLELRTGCDALFYITSTAPMKERLWSLVKYRQVTKHGNSSLNETQLFAALQDLRKETVQIEVLNAYPYLQTHETPINRSTIDTITPDYVIRKSQLNEDMSKLLRAFGCETRFVSENIHLLEHASGLDKITIDDDDGLHERMLRLARQRNDVGLKKAADFAR 285          
BLAST of Gchil1324.t1 vs. uniprot
Match: A0A2V3J1M7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1M7_9FLOR)

HSP 1 Score: 153 bits (387), Expect = 2.240e-41
Identity = 95/238 (39.92%), Postives = 131/238 (55.04%), Query Frame = 0
Query:   63 PSSPAEHLTCVVYERPPRTGSTTIGEALERCLLHLGYKQPVW-KGFQARSMVISDMLQQPYERVMAVTRHFYMNGTALRQLRNRCESLLYITSTATMKQRLWSLVKYRQLQTHGNTSLSKEQVQLAIEELKREKAQIKILNSYPYLYSNGTAVDVEGDERIVPDYVIRKSMLVDDVSDLLHAFGCSSRVISQNVHRARHDE--VLDAIDIDDNDSLHTRLLQRAEERNEFGLKKASNF 297
            PSS    + C +Y+RPPRT STTIG AL+ CL    ++QP   K   A    I D LQ P  R   ++RHFY+N   +  LR RC +L YITS A +++RL S  KY     HGN++L  +Q+  A E+      Q + LN YPY+  +   ++V     +VP+YVIRK  L  D++ LL    C +  +S NVHRA  DE  +L  I   D D+L+  L +RA   N  GL++   F
Sbjct:   40 PSSQTPSIRCFIYDRPPRTASTTIGTALQSCLRRHHFRQPPREKQRSAIPYTIFDNLQTP--RKALLSRHFYLNSRTVSLLRKRCSTLFYITSCAPIEERLLSASKYTLSGGHGNSTLDDQQMHAAAEKANSSTRQKRFLNHYPYVDDDKKPINVS--TPLVPNYVIRKPHLRQDLTKLLQTLQCDTSFVSGNVHRAPADESQILQHITAGD-DTLYQTLARRALSHNALGLQQLKQF 272          
The following BLAST results are available for this feature:
BLAST of Gchil1324.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4P6_9FLOR5.550e-9349.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1M7_9FLOR2.240e-4139.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 181..201
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..299
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:313425..314324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1324.t1Gchil1324.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 313425..314324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1324.t1 ID=Gchil1324.t1|Name=Gchil1324.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=300bp
MKLPNVPVVSGTILSALVLLLFVSGRYESLIPQLRSPTEGEALLLDENPS
LSTRNTSKLPDLPSSPAEHLTCVVYERPPRTGSTTIGEALERCLLHLGYK
QPVWKGFQARSMVISDMLQQPYERVMAVTRHFYMNGTALRQLRNRCESLL
YITSTATMKQRLWSLVKYRQLQTHGNTSLSKEQVQLAIEELKREKAQIKI
LNSYPYLYSNGTAVDVEGDERIVPDYVIRKSMLVDDVSDLLHAFGCSSRV
ISQNVHRARHDEVLDAIDIDDNDSLHTRLLQRAEERNEFGLKKASNFGR*
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