Gchil1323.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1323.t1
Unique NameGchil1323.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length479
Homology
BLAST of Gchil1323.t1 vs. uniprot
Match: A0A2V3J3J7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3J7_9FLOR)

HSP 1 Score: 305 bits (781), Expect = 7.740e-95
Identity = 202/533 (37.90%), Postives = 292/533 (54.78%), Query Frame = 0
Query:    1 MGHLRAILKLFQTIEDGQQGIPTAARISNNSFVIISALSSGIIDVYTRPCITAKFAKSETSYLKHQKKKSQVTALALQDGGAQAVSGDDQGFLHVWLTNDPTKCTWRQCGYGPVVDVAISNRYILASFKGIDEKDGCMLLLNKGLNIEDDWEKVKVYKPGRYTKCALSEILKLKELNVVYYLNKSLIYEKNPQDADDQPFSSLEVTKPFFVCRNPACLTTMVFAALVQRQLMLWDPKRPAVDGKNPFYFNLKSSEPVAFNKTSSISSVCDGHMFILTILENTLSVVTLEKEIKPKPKGPITYEEKDNPTKHTVFHAVRELVNGNPEPVDRIMAEVDGTDTTEMTSNS-----------------RTAIIGE-ETPDRISETP---------------------------PNSKADNESSIPPDTPSVPVRVVLKDETPEMDR----------SNVPSDSPSERQEVDVEPKEVAGNNATPTATEAEPGDERIPNEPFNVVGQDDSIIVSDGEDNEEEVEEDPEGMGHEFWGLF 478
            M + RA LK+ QTI DG++  P A+RISN++ V++ A S   + VY+RP +   F K++ +Y +HQ K   +TALALQDGGAQA SGD  G +HVWLT+D  + ++ Q   G VVD+AIS  ++L SFKG    DG M L++KGLN++D+W+ ++ Y+ G+Y+KC LSE LKL ELN+ YY  KS+IYE+NPQ    + F  LE +KP+F+ RN AC  T+V A +VQ  LMLW PK+PAV+ +NP +  L+S + +  N T S SSV   +MF++TI +  + V+ L+K++K K K  +  +E     +  V  A++E+V GNP+PV+ I+  V+ ++T      S                 RT+ +G  ET   +S +                                A+N         + PV     ++  E             SN P   P+  Q     P+E +   +T TA EA P DER     + V+   D     D ED EEE+EEDPE + H+FWGLF
Sbjct:    1 MSNDRAHLKVVQTI-DGEKA-PIASRISNDARVVLVARSDNTVQVYSRPALADDFEKTDVTYKQHQAK---ITALALQDGGAQAASGDADGNVHVWLTSDTAQYSFSQRDRGAVVDLAISEHFLLVSFKGKTGSDGSMQLISKGLNVQDEWKVIQKYEGGKYSKCMLSERLKLHELNLAYYHKKSVIYERNPQSDATEVFDPLEGSKPYFMFRNVACRGTVVIACIVQGFLMLWAPKKPAVEKQNPQFLTLRSDDNIILNNTLSASSVFRRNMFLVTIFDQKVHVIVLQKDLKAK-KSLVLADEPSVTKQPNVMDAMKEMVRGNPDPVNHIVNTVEVSETPATAEKSQQATQTKRDAPSDYEPSRTSPVGVVETSGAVSTSSGIDXXXXXXXXXXXXXXXXXXXXXXXXXXXVAENILGAVATHNATPVEPAAHEDNTEESTLLKDNMRTYSSNEPEKEPTAEQAA---PREASITTSTGTAGEA-PQDERA----YVVMSASDV----DNED-EEEIEEDPEALAHDFWGLF 514          
The following BLAST results are available for this feature:
BLAST of Gchil1323.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3J7_9FLOR7.740e-9537.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..468
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 9..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:278714..280150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1323.t1Gchil1323.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 278714..280150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1323.t1 ID=Gchil1323.t1|Name=Gchil1323.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=479bp
MGHLRAILKLFQTIEDGQQGIPTAARISNNSFVIISALSSGIIDVYTRPC
ITAKFAKSETSYLKHQKKKSQVTALALQDGGAQAVSGDDQGFLHVWLTND
PTKCTWRQCGYGPVVDVAISNRYILASFKGIDEKDGCMLLLNKGLNIEDD
WEKVKVYKPGRYTKCALSEILKLKELNVVYYLNKSLIYEKNPQDADDQPF
SSLEVTKPFFVCRNPACLTTMVFAALVQRQLMLWDPKRPAVDGKNPFYFN
LKSSEPVAFNKTSSISSVCDGHMFILTILENTLSVVTLEKEIKPKPKGPI
TYEEKDNPTKHTVFHAVRELVNGNPEPVDRIMAEVDGTDTTEMTSNSRTA
IIGEETPDRISETPPNSKADNESSIPPDTPSVPVRVVLKDETPEMDRSNV
PSDSPSERQEVDVEPKEVAGNNATPTATEAEPGDERIPNEPFNVVGQDDS
IIVSDGEDNEEEVEEDPEGMGHEFWGLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf