Gchil1322.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1322.t1
Unique NameGchil1322.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length503
Homology
BLAST of Gchil1322.t1 vs. uniprot
Match: A0A2V3J3L0_9FLOR (NB-ARC domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3L0_9FLOR)

HSP 1 Score: 597 bits (1540), Expect = 4.210e-209
Identity = 298/508 (58.66%), Postives = 376/508 (74.02%), Query Frame = 0
Query:    1 MDIGQASSSTAPNNED---SKPFARPRLKRRRLAYARPAFIAVRENPVHYILGFSESLNRIERSVCNLVISGKRSVAVVGLPGCGKTVILRGLAYHFEIHSVFRDGICLVHLGPEATVDATFNNLFEVMRRLGGAAPAKRIEAVLQRKLDYDECIQSIQRFLKDKSFLLILDNVCESTPKVLHILSILTMRKYARALGRMSVLTSTRSVRIARTFAGASVVQVQLRRPLDDVSRDIFCAHSALTRSYIDSICVKKDYPTRFILERCSGMPLVLAVVGGAMKRLLSETKTEEDRDAMWRQYQNYLSNNFDQFGEICGFFKMMDACVRDISS-RSWYVSITARDAICSLALFQKGVWVPIVILQRLWGLDKKEEAMIVVQSLARLCLVLQDMRNGMVGISIPGIVLDYCCHEAKQGKGIRIWHQRLLNSFLMTTAN-GFTDGKSLSNHTKMQ-RSAEEEEYLRENVGYHLSQILSVSEGGSETNPSFTEAASRFFRNHLRDDVNGSAQIT 502
            MDIGQ +SS +  NED    KPFARPRLKRRRL Y RP+FIAVR+NP HY+L FSE   RIER+VCNLV+S KRSV VVGLPG GKTV+LRGLAYH  + + FRDGICL+HLGPE T+++TF +LF+VM RLGG +  KRIE +L+RK D+ +C++++QRF KDK FLL+LDN+CESTP+VL +LS+L  ++ + A+ +M+VLTSTRSV+IARTF+GASV+Q+ L    DDVS DIFCA                D P R +L RCSG+PL LAVVGGA+KRL  +  TEE + ++W  Y+NYL+NNF QFGEICG FKM+D+CV D+S+ + W +SI  RDA+CSLALF+KG WVP +ILQRLW L+   E + V+Q LARLC +LQ++RNG +GISIP IV+DYCC  AKQG+GIRIWHQR L SF+ TT      +G+S     K   +S EE +YL+ N+ YHLSQ+L  SE G+  NPSF  A SRFFRNHL  D     ++T
Sbjct:    1 MDIGQGASSASVENEDPDVGKPFARPRLKRRRLTYMRPSFIAVRQNPAHYVLDFSEDSTRIERTVCNLVLSDKRSVTVVGLPGTGKTVMLRGLAYHSAVMNTFRDGICLIHLGPEITIESTFKHLFDVMHRLGGLSHKKRIETLLRRKNDHIQCMEAVQRFFKDKRFLLMLDNLCESTPEVLQVLSVLATQRRSTAISKMTVLTSTRSVQIARTFSGASVMQIPLHGHFDDVSLDIFCAXXXXXXXXXXXXXASSDSPARVMLRRCSGLPLALAVVGGAVKRLFIKATTEEAKSSIWTHYKNYLTNNFAQFGEICGLFKMLDSCVLDLSNTKDWQLSIKPRDALCSLALFKKGTWVPTIILQRLWSLESHRETVKVIQVLARLCFILQEVRNGQLGISIPDIVVDYCCQLAKQGQGIRIWHQRFLTSFVTTTTKEAMENGESTVKVEKTSTKSNEEAQYLKNNIAYHLSQVLDFSETGTNANPSFLAATSRFFRNHLPQDFQVPNELT 508          
BLAST of Gchil1322.t1 vs. uniprot
Match: R7QUJ9_CHOCR (NB-ARC protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUJ9_CHOCR)

HSP 1 Score: 250 bits (638), Expect = 1.800e-73
Identity = 146/387 (37.73%), Postives = 218/387 (56.33%), Query Frame = 0
Query:   34 RPAFIAVRENPVHYILGFSESLNRIERSVCNLVISG-KRSVAVVGLPGCGKTVILRGLAYHFEIHSVFRDGICLVHLGPEATVDATFNNLFEVMRRLGGAAPAKRIEAVLQRKLDYDECIQSIQRFLKDKSFLLILDNVCESTPKVLHILSILTMRKYARA-------LGRMSVLTSTRSVRIARTFAGASVVQVQLRRPLDDVSRDIFCAHSALTRSYIDSICVKK---DYPTRFILERCSGMPLVLAVVGGAMKRLLSETKTEEDRDAMWRQYQNYLSNNFDQFGEICGFFKMMDACVRDISSRSWYVSITARDAICSLALFQKGVWVPIVILQRLWGLDKKEEAMIVVQSLARLCLVLQDMRNGMV-GISIPGIVLDYCCHEAK 408
            RP   +VR NP HY++ F       E+ V +L+    +R V +VGLPG GKTV LR +A++  +H+ FRDGI L+ L P  T  +   +L E++ R+ G AP K IE  L     +   I ++   L+ +  LLILDNV  S   +L +L  LT    A A         R+++L S RSV +AR   G S+V + L  PL   +RD+ CAH  L R+ +D+ C      + P + +L RC+G+PL +AV GGA+KRLL +   + +R+++W  Y  YL+ +F+QFG+I   F  + ACV  I+   W + +  ++A+ +L        V    LQ+LWG+  + E +  +  LA  CLV + MR+G V G+ IP I++DYC HEAK
Sbjct:   17 RPPVFSVRPNPAHYLVSFQPGSTSPEQHVVSLLFENDRRLVCLVGLPGSGKTVALRSVAHYAAVHAHFRDGIALLGLAPSTTPASLLADLCELVGRIAGEAPKKDIEQQLASSNSHIGAIDAVANALRHRRVLLILDNVSSSPGIILQLLQRLTHVAMASASLPPKAKTSRLAILASARSVLVARKIGGNSLVHIDLLDPLGSTARDMLCAHLGLPRAELDAHCAVPAVGEAPAKVVLRRCAGLPLAVAVAGGAVKRLLVQ---DGNRESIWAHYSEYLTKSFEQFGQISRLFSNVAACVDAIAK--WPLILPVQNALAALVTLPSDTGVSKEKLQKLWGVSNEGEVLAAIDELANQCLVKRIMRDGKVLGMKIPSIIMDYCRHEAK 398          
BLAST of Gchil1322.t1 vs. uniprot
Match: A0A0S4LIZ2_9BACT (WD repeat protein n=2 Tax=Candidatus Nitrospira nitrosa TaxID=1742972 RepID=A0A0S4LIZ2_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 6.570e-6
Identity = 108/427 (25.29%), Postives = 172/427 (40.28%), Query Frame = 0
Query:   53 ESLNRIERSVCN-----LVISGKRS-VAVVGLPGCGKTVILRGLAYHFEIHSVFRDGICLVHLGPEATVDATFNNLFEVMRRLGGAAPAKRIEAVLQRKLDYDECIQSIQRFLKDKSFLLILDNVCESTPKVLHILSILTMRKYARALGRMSVLTSTRSVRIARTFAGASVVQVQLRRPLDDVSRDIFCAHSALTRSYIDSICVKKDYPTRFILERCSGMPLVLAVVGGAMKR-----LLSETKTEEDRDAMWRQYQNYLSNNFDQFGEICGFFKMMDACVRDISSRSWYVSITARDAICSLALFQKGVWVPIVILQRLW----GLDKKEEAMIVVQSLARLCLVLQDMRNGMVGISIPGIVLDYCCHEAKQGKGIRIWHQRLLNSFLMTTANGFTDGKSLSNHTKMQRSAEEEEYLRENVGYHLSQ 464
            E LNR++ S+       + ++G+ + + V G  G GKTV+   L    E+   F DGI    LG E  + A      E ++ LG  AP   + +  Q K       Q +QR+L +K+ LLILD+V ++     H +++  +   +R      +L +TR   I  T  GA    V +    +  +  +    S +  + +    V+       + + C G+PL LA+ G  +        L    TE D + +   Y           G I   FK M   V+ +S          R     L +F +   VP V+++RLW    GL   +   ++    AR  L+L+       GIS   +  D+          +   H+RLL S+    A   T   S SN       AE + Y    + YHL Q
Sbjct:  211 EELNRLKLSLVQGRHGAIGLTGETTKIGVHGQGGIGKTVLAIALTNDEEVQRAFPDGIYWFTLGQEPDLIAC---QVEWLKALGDQAPV--VSSASQGK-------QQLQRYLAEKTCLLILDDVWQTE----HAVALDVIGPKSR------LLITTRDATIL-TAVGAKEESVGVLS--EQAAVQLLAEWSGVDPTKLPPEAVQ-------VADSCQGVPLALALAGAQIHEGMDWATLLLALTEGDLEFLDHPY-----------GSI---FKSMKLSVQALSEAD-------RGRYLELVIFPEDAHVPDVVIERLWHETAGLTAAQSQKLL-SRFARKSLLLRKDERSRFGISFHDLQHDFLRLLTPDAASV---HRRLLESY-GPCAQRETSDWSWSN------LAEGDSYGWRYLAYHLIQ 573          
BLAST of Gchil1322.t1 vs. uniprot
Match: A0A6V7P7D9_ANACO (NB-ARC domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7P7D9_ANACO)

HSP 1 Score: 58.2 bits (139), Expect = 6.900e-6
Identity = 56/224 (25.00%), Postives = 102/224 (45.54%), Query Frame = 0
Query:   73 VAVVGLPGCGKTVILRGLAYHFEIHSVFRDGICLVHLGPEATVD----ATFNNLFEVMRRLGGAAPAKRIEAVLQRKLDYDECIQSIQRFLKDKSFLLILDNVCESTPKVLHILSILTMRKYARALGRMS--VLTSTRSVRIARTFAGASVVQ-VQLRRPLDDVSRDIFCAH-SALTRSYIDSICVKK-----------DYPTRFILERCSGMPLVLAVVGGAM 277
            ++VVG+PG GKT +LR +  H  +   F     ++ + PE ++     +T N +FE  +    A+     E  L         ++ I R L+++ ++ + D+V  S              KYA         ++ ++RS  +   F  +S     + ++ LD  S+D+   + S L R+Y  S+  KK           +Y +  I+E+CSG+PLV+  +GG +
Sbjct:    6 ISVVGMPGSGKTTLLRSVFNHENVRGSFEYHAWII-VTPEYSIKELLRSTLNQIFEERQEPMPASTNIMSEFQL---------VEMISRCLRNRRYIFVFDDVWSS--------GFWEYFKYALPDNNCGSRIVVASRSAEVVSAFKVSSDNSGSEAKKGLDSDSKDVHHYYLSPLPRNYAWSLFCKKAFQSESCPPELEYLSWKIIEKCSGLPLVIVAIGGLL 211          
The following BLAST results are available for this feature:
BLAST of Gchil1322.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J3L0_9FLOR4.210e-20958.66NB-ARC domain-containing protein n=1 Tax=Gracilari... [more]
R7QUJ9_CHOCR1.800e-7337.73NB-ARC protein n=1 Tax=Chondrus crispus TaxID=2769... [more]
A0A0S4LIZ2_9BACT6.570e-625.29WD repeat protein n=2 Tax=Candidatus Nitrospira ni... [more]
A0A6V7P7D9_ANACO6.900e-625.00NB-ARC domain-containing protein n=1 Tax=Ananas co... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00364DISEASERSISTcoord: 158..172
score: 40.83
coord: 263..277
score: 38.67
coord: 72..87
score: 39.38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 335..407
e-value: 1.6E-5
score: 26.9
IPR002182NB-ARCPFAMPF00931NB-ARCcoord: 72..288
e-value: 2.1E-14
score: 53.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 38..220
e-value: 7.8E-17
score: 63.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 44..304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:276090..277598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1322.t1Gchil1322.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 276090..277598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1322.t1 ID=Gchil1322.t1|Name=Gchil1322.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=503bp
MDIGQASSSTAPNNEDSKPFARPRLKRRRLAYARPAFIAVRENPVHYILG
FSESLNRIERSVCNLVISGKRSVAVVGLPGCGKTVILRGLAYHFEIHSVF
RDGICLVHLGPEATVDATFNNLFEVMRRLGGAAPAKRIEAVLQRKLDYDE
CIQSIQRFLKDKSFLLILDNVCESTPKVLHILSILTMRKYARALGRMSVL
TSTRSVRIARTFAGASVVQVQLRRPLDDVSRDIFCAHSALTRSYIDSICV
KKDYPTRFILERCSGMPLVLAVVGGAMKRLLSETKTEEDRDAMWRQYQNY
LSNNFDQFGEICGFFKMMDACVRDISSRSWYVSITARDAICSLALFQKGV
WVPIVILQRLWGLDKKEEAMIVVQSLARLCLVLQDMRNGMVGISIPGIVL
DYCCHEAKQGKGIRIWHQRLLNSFLMTTANGFTDGKSLSNHTKMQRSAEE
EEYLRENVGYHLSQILSVSEGGSETNPSFTEAASRFFRNHLRDDVNGSAQ
IT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR002182NB-ARC
IPR027417P-loop_NTPase