Gchil1284.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1284.t1
Unique NameGchil1284.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length815
Homology
BLAST of Gchil1284.t1 vs. uniprot
Match: A0A2V3IM31_9FLOR (DNA repair protein RAD4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM31_9FLOR)

HSP 1 Score: 773 bits (1996), Expect = 4.420e-269
Identity = 442/800 (55.25%), Postives = 556/800 (69.50%), Query Frame = 0
Query:   37 MSDAEPPA-TLNGLSQSAVSHALTRAHKRK----------RARYNNVAPAD-SAPPLLVQQRASGASVPYQKRRRTSLIPLPNGSDDGDSNDEWEEHVHVDQRAVHAASASAXXXXXXXXXXXXXPSGGHDARVPQPVDDGAPRQSQLTELQKSKLRRKMGAQLRRSRLRVHAVHLLLLAAHMLRQDCAANDSLCRAVALSLLPHDAFLSADR--LKQRLARFALWMRSTFHAAVLVSHPAQVRAQSVFRRACSASERIVHSARVGRGDIIDIASLACALVRAQNFRCRLVLALQPVPFRIKQGNKEQKLSARRNVVCARANDVTESALYAWTEVWSQEHAAWIVVDVFSGQVHQGYSRDIIDIGLLRIPVFDSQFMQSTDCAEGTTNPKRRSSRRQSTRRKKQTR---DEPIRNVGEQYYSHVVAVENGRLTDVSRRYVRNWLQ-AEDYRAKGKLFENVLGNLSVSVGTGSDEALKKEVEEFESLTAEETVPSTMTAIQKHPRYVLERHIKRYELIWPREPIAGHIKNEPVFLRANVRLLHTKDRWMRQMREVKQNEKPMKSVKSKNGTDAQVQLYGEWQTQALKIAACKDGKVPRSMHGNVDLWTAEHLPPGAEHVNVPHAKAAAKKIGVDFAPAMTGFDIRGGRSIPRIEGVVVAAENAALVRDGAREMQRAARERAERRASEEAVAKWAKLVRALVVRHKVKKKYGGV-GGASYESEQKRRGREKAAREKSGMRGA---AGDGQRSVSMRTRGAARKAKLMSTEHEHTFDDGVHVEGDRWLKKCKVCELEVWYERL 814
            MS+  PP  +L+ ++QS+V HA+TR  KR+          R   ++  P D SA PL          VPY KRR+TSLIP      D DSNDEWEEHVH+D++ V AA+  +   XXXXXXXXXX                   + QLT+ Q  +L+RK+ A+ R+SR RVH +HLLLL AHMLRQD AA++ L RA+ALS++P D +L+ ++  LKQ+LA FALW R  FH +V V+     R  + F+R C+A+ER++   +  +GDIID+A+LACALVRA   RCRLVLALQ VP R +  NKEQ+LS RR +V A   D++ES L+AW EVW  +   WIVVDV+ GQV + +S  +I+  L RIP +    MQS +     T  K  S+ R+S R KKQ     D P+R++ +  ++HVVAVE G L DVSRRYVRNWLQ  E  RA GKLFENVL NL  S  + SDEAL+ E +EFESLTAEE VP+T+TA+QKHPRYVLERHIKRYE+IWP++PI G+IK+EP+FLRANVRLLHTKDRW+R+MR+VK   KPMKSVKSKNG D+QV L+G WQTQAL I  CKDGKVPR  HGNVDLWT +HLP GA H+N+PHA+ AA K+GVDFAPAMTGFD+RGGRS+PRIEGVV+A ENA LVRD ARE+ R ARERAE+R  EEA+ +WAKL+RA+    +VKK+YGG   G +YESEQKR+G  KAA EK+G+ G     G G++     T G   K K+    HEH FD+  HVE D W+K C++CELEV +E+L
Sbjct:    1 MSEDHPPEESLSEIAQSSVRHAVTRGRKRRALPPQQNGSVRLAVDDTRPTDRSAAPLY--------PVPYHKRRKTSLIPHAYAHSDDDSNDEWEEHVHIDEQLVRAAAXXSLKNXXXXXXXXXXXXXXXXXXX---XXXXXXXRQQLTDQQLRRLQRKLAAENRKSRQRVHTIHLLLLIAHMLRQDIAADNHLVRALALSIMPPDTWLTPEKGALKQQLATFALWTRLHFHTSVFVTQNGPHRPHNSFKRPCNAAERLIACVQRCKGDIIDVATLACALVRAHGLRCRLVLALQLVPTRARTSNKEQQLSVRRQLVQASVKDLSESCLFAWIEVWCNQQNTWIVVDVYGGQVSERFSGQVIEHSLQRIPSYGHNVMQSYNVQH--TPSKATSTPRRSRRAKKQDNAQEDAPVRHLKQDCFAHVVAVEKGLLRDVSRRYVRNWLQQVEACRASGKLFENVLNNLQASCCSDSDEALQHESQEFESLTAEEKVPTTLTAVQKHPRYVLERHIKRYEVIWPKQPIVGYIKDEPIFLRANVRLLHTKDRWIREMRQVKAGSKPMKSVKSKNGMDSQVHLFGGWQTQALAIPPCKDGKVPRGQHGNVDLWTPDHLPVGAVHINIPHARVAATKVGVDFAPAMTGFDVRGGRSVPRIEGVVIAVENADLVRDAAREVARMARERAEKREREEALVRWAKLLRAVKAGQRVKKEYGGFDNGGTYESEQKRQGALKAALEKNGVTGLHFDTGTGKQEERTTTNG---KLKMNKKNHEHDFDEPRHVEEDTWVKTCRICELEVRFEKL 784          
BLAST of Gchil1284.t1 vs. uniprot
Match: R7QHI9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHI9_CHOCR)

HSP 1 Score: 447 bits (1151), Expect = 4.150e-143
Identity = 291/719 (40.47%), Postives = 399/719 (55.49%), Query Frame = 0
Query:   37 MSDAEPPATLNGLSQSAV---SHALTRAHKRKRARYN------NVAPADSAPP--LLVQQRASGASVPYQKRRRTSLIPLPNGSDDGDSNDEWEEHVHVDQRAVHAA----SASAXXXXXXXXXXXXXPSGGHDARVPQPVDDGAPRQSQLTELQKSKLRRKMGAQLRRSRLRVHAVHLLLLAAHMLRQDCAANDSLCRAVALSLLPHDAFLSADRLKQRLARFALWMRSTFHAAVLVSHPAQVRAQSVF--RRACSASERIVHSARVGRGDIIDIASLACALVRAQNFRCRLVLALQPVPFRIKQGNKEQKLS-ARRNVVCARANDVTESALYAWTEVWSQEHAAWIVVDVFSGQVHQGYSRDIIDIGLLRIPVFDSQF-MQSTDCAEGTTNPKRRSSRRQSTRRKKQTRDEPI----RNVGEQYYSHVVAVENGRLTDVSRRYVRNWLQAEDYRAKGKLFENVLGNLSVSV-GTGSDEALKKEVEEFESLTAEETVPSTMTAIQKHPRYVLERHIKRYELIWPREPIAGHIKNEPVFLRANVRLLHTKDRWMRQMREVKQNEKPMKSVKSKNGTDAQVQLYGEWQTQALKIAACKDGKVPRSMHGNVDLWTAEHLPPGAEHVNVPHAKAAAKKIGVDFAPAMTGFDIRGGRSIPRIEGVVVAAENAALVRDGAREMQRAARERAERRASEEAVAKWAKLVRALVVRHKVKKKYGGVG 731
            MS+++  A    L  +AV   + A+TR  KR+  +++       + P  +A P  L   QR    +V Y KRRR SLIP     D+ DSNDEWEE VH+D  AV AA    +  A   XXXXXXXXXX                                      LRR     HA+HLLL  A + R D AAN  L   +ALS+LP D FL  + + + L+R  LW+R TF    ++     +    VF  RR CSA+ER V     G GD++DIA    ALVR+Q FRCR+V+ LQP+  ++ +  K +        VV     + TE+ LY+W EVW      WI +D+  G + +    +++   + R+  F  +  ++        T+P RR S R++++R +    +P+    R +    +SHVVA+E G +TDV+ RY RN  +    RA GK+FE VL            DEA + E++EF++L A E VP+T+TA +KH RYVLERHIKRYE++ P+ P+ GH   EP++LR+ V LLHTKDRW+RQMREV  + KPMK VKSKNG+D  V L+G+WQT  L I  C DGKVPR+M GNVDLWT EHLP G  H+  P A+ AA+ +GVDFAPAMTGF++  GR +P+IEG+V+A EN  ++RD AR   +  RER  +                   R +V+++YGG G
Sbjct:    1 MSESQEKANSQQLRAAAVDGVTGAITRGRKRRSRQHDVPRNDIQIGPLTTAKPEQLAAPQRQL-QNVSYHKRRRVSLIPGTEVEDEDDSNDEWEEDVHMDTDAVEAAVKLMTQDAEQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRR-----HALHLLLSVATLFRLDGAANTDLVSGMALSMLPKDMFLRVESISEDLSRLGLWIRMTFKPTAMIQD--LIYGDKVFSRRRLCSAAERAVACISRGAGDVMDIAVAIAALVRSQGFRCRIVIPLQPLQHKLSKATKAKGSGPGGATVVEVNPFNETEAILYSWLEVWCPADKRWIPLDIREGFLSEENPTEVLRKSISRVQCFAERVDLKPVKRDALATSPARRKSTRRTSKRLQTEHLDPVEVPRRALHPALFSHVVAIERGVITDVTWRYTRNSTEVSKARATGKVFEKVLQRFQDECPADADDEAYRLELDEFDALAANEPVPTTLTAFEKHRRYVLERHIKRYEVVHPKFPVIGHFNEEPIYLRSRVHLLHTKDRWIRQMREVMDDAKPMKVVKSKNGSDDTVDLFGKWQTMPLIIPECVDGKVPRNMRGNVDLWTPEHLPKGTVHIKSPFARGAARTLGVDFAPAMTGFELMRGRPVPKIEGIVIAEENEDMIRDAARSSAQVVRERQAKXXXXXXXXXXXXXXXXXXXRERVQRRYGGKG 711          
BLAST of Gchil1284.t1 vs. uniprot
Match: M2W336_GALSU (Nucleotide excision repair complex subunit XPC-like protein isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W336_GALSU)

HSP 1 Score: 189 bits (479), Expect = 6.730e-47
Identity = 111/319 (34.80%), Postives = 183/319 (57.37%), Query Frame = 0
Query:  439 YYSHVVAVENGR-----LTDVSRRYVRNWLQAEDYRAKGKLFENVLGNLSVSVGTG----SDEALKKEVEEFESLTAEETVPSTMTAIQKHPRYVLERHIKRYELIWPREPIAGHIKNEPVFLRANVRLLHTKDRWMRQMREVKQNEKPMKSVKSKNGTDAQ--VQLYGEWQTQALKIAACKDGKVPRSMHGNVDLWTAEHLPPGAEHVNVPHAKAAAKKIGVDFAPAMTGFDIRGGRSIPRIEGVVVAAENAALVRDGAREMQRAARERAERRASEEAVAKWAKLVRALVVRHKVKKKYGGV--GGASYESEQKRRGR 744
            Y  ++ A+EN R     + DV+ RY+   +   + R K + +E  +   S +        SD  +  E  E+E     E +P+ +  ++ HP+YVLE H+K+YE I+P++ I G+    PV+ R+NV +LHT+D W+R+MR+V +++   K VK+K   + +   +L+G WQT+     + ++GKVP++  G VDLW+  HLP G  HV   +A   AK++ +D+APAM GFDI  GRS+P ++G+V+A E   ++ D  R+  +   +   +R  E A+  W   +R +  + +VK+KYGG+     SYE   K+R R
Sbjct:  339 YPIYITAIENVRDDVTIIRDVTLRYISLSI-IRNQRLKDEFWEKTMEAFSHTQYQRNIIQSDVCIIHEEREWEYWNNMEPIPNQIQKLKGHPQYVLEMHLKKYEAIYPKDRILGYCGEYPVYPRSNVHILHTRDGWIREMRQVLKDQVAWKRVKTKRNANHEEGTELFGIWQTEPFTPPSVENGKVPKNKRGQVDLWSKSHLPQGCIHVRYSNAAMIAKRLSLDYAPAMIGFDIHQGRSVPILDGIVIAKEYQEVIEDACRQDCQHKEDEQMKRRYERALQLWKACIRHVQSQLRVKQKYGGLLQDDLSYEKGSKKRAR 656          
BLAST of Gchil1284.t1 vs. uniprot
Match: A0A4P9XQY8_9FUNG (Uncharacterized protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XQY8_9FUNG)

HSP 1 Score: 188 bits (477), Expect = 8.450e-47
Identity = 141/482 (29.25%), Postives = 216/482 (44.81%), Query Frame = 0
Query:  292 IIDIASLACALVRAQNFRCRLVLALQPVPF-------------------RIKQGNKEQKLSARR------NVVCARANDVTESALYAWTEVWSQEHAAWIVVDVFSGQVHQGYSRDIIDIGLLRIPVFDSQFMQSTDCAEGTTNPKRRSSRRQSTRRKKQTRDEPIRNVGEQYYSHVVAVENGR-LTDVSRRYVRNWLQAEDYRAK---GKLFENV-LGNLSVSVGTGSDEALKKEVEEFESLTAEETVPSTMTAIQKHPRYVLERHIKRYELIWPREPIAGHIKNEPVFLRANVRLLHTKDRWMRQMREVKQNEKPMKSVKSK---------------NGTDAQVQLYGEWQTQALKIAACKDGKVPRSMHGNVDLWTAEHLPPGAEHVNVPHAKAAAKKIGVDFAPAMTGFDIRGGRSIPRIEGVVVAAENAALVRDGAREMQRAARERAERRASEEAVAKWAKLVRALVVRHKVKKKYG 728
            + D   L  AL+R    R R V++LQP+ F                   R ++G  E K + RR      N    +AN        AW EV       W+ VD+  G V+                                                     EP R        +V A + GR + DVSRRY   W  A+  R +   GK   +  L  L++       E   +E  E  S    E +P+T++    HP Y LERH+K++E++ PREP+ GHI+ EP++ R+ V+ LHT + W+++ R++K+ E P+K VKS+                G +    LYG WQT+         GK+P++ +GN+DL+  E LPPG  H+        A+K+ +D+A A+TGFD +    IP + G+VVAAEN ALV D  R  + A  E+   +  + A+ +W  L+  + +R +++K+YG
Sbjct:  192 LADSTLLFVALLRMLGVRTRFVVSLQPMSFSVAATKKILAATEMQTASDRSQKGQVESKPTKRRKTNKSQNATSTKANQPQ----MAWCEVLHPTEGHWVAVDLARGLVN-----------------------------------------------------EPTRMEEHGPLPYVTAFDIGRRIKDVSRRYASQWA-AKTLRLRPPMGKAGRDWWLDTLAIYAERDPSEVDVREDAELLSHELSEKMPTTVSEFNNHPLYALERHLKKFEILSPREPVIGHIRGEPIYPRSCVKQLHTAEAWLKEGRQIKKGEMPVKEVKSRAVTLLSRREQVMAQMEGYEKLSGLYGYWQTEPYAAPPVVSGKIPKNGYGNIDLFQPEMLPPGGVHLPQRGIAKIARKLDIDYAEAVTGFDFQSRHCIPVVTGIVVAAENEALVLDAWRAHEHARFEKERSKREKAALKRWRTLLHGISIRDRLQKQYG 615          
BLAST of Gchil1284.t1 vs. uniprot
Match: F0W8D5_9STRA (DNA repair protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8D5_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.940e-46
Identity = 160/592 (27.03%), Postives = 268/592 (45.27%), Query Frame = 0
Query:  162 VDDGAPRQSQLTELQKSKL-RRKMGAQLRRSRLRVHAVHLLLLAAHMLRQDCAA-NDSLCRAVALSLLPHDAFLSADRLKQRLARFALWMRSTFHAAVLVSHPAQVRAQSVFRRACSASERIVHSARVGRGDIIDIASLACALVRAQNFRCRLVLALQPVPFRIKQGNKEQKLSARRNVVCARANDVTESALYA---WTEVWSQEHAAWIVVDVFSGQVHQGYSRDIIDIGLLRIPVFDSQFMQSTDCAEGTTNPKRRSSRRQSTRRKKQTRDEPIRNVGEQYYSHVVAVE--NGRLTDVSRRYVRNWLQAEDYRAKGKLFENVLG--NLSVSVGTGSDEALKKEVE----EFESLTAEETVPSTMTAIQKHPRYVLERHIKRYELIWPREPIAGHIKNEPVFLRANVRLLHTKDRWMRQMREVKQNEK--PMKSVKSKNGT--------DAQVQLYGEWQTQALKIAACKDGKVPRSMHGNVDLWTAEHLPPGAEHVNVPHAKAAAKKIGVDFAPAMTGFDIRGGRSIPRIEGVVVAAENAALVRDGAREMQRAARERAERRASEEAVAKWAKLVRALVVRHKVKKKYGGV 730
            VD  A  +S   + QK K  RRK+    ++  L +H  HL+LL A        +   +L RA+  S++P       + +  +L     +    F      S+      ++ F  A S  ER        +G  I    L   L R+  + CRLV+AL      +K         A  N++        ES  YA   W EVW+ +   W   DV    V Q    +I+                                              P +++     S+V++ +  +G   DV+ RYV +W +    R   + F  ++   N  +S  T  D ++  ++E    E +     E++P+++   ++H RY LERH+ R E++ PR+P AG  K + VFLR +++ L +   W+RQ R +K+ EK  P+K +  K  T          +V LYG WQT A       DG VP++ HGN++LW+  HLP GA H+ + H  +AA K+G+D+APA+ GF+ + G + P+ +G++VA+ +  L+ D    +++   E A +R       +W +LV+ L++R++++  YG +
Sbjct:   55 VDWEAVNKSLQEDSQKGKSKRRKLSKDEKKRNLLLHQSHLVLLMASGTEWHATSCKHNLLRALLASIVPAKVRNEIEAIALKLQHLCRFYNQKFSLVESQSNGHSDLDEATFLHAFS--ER--------KGTRIIFHLLFLVLCRSIGYYCRLVVALDAYQIDLK---------ASENIILRDP----ESDFYAPCIWIEVWNSDTNQWTSCDVAKNTVLQQNVSEIL----------------------------------------------PRKSI-----SYVLSFDQISGLAVDVTARYVHSWSKIMQLRHGHEFFSELVEAYNKRISETTPKDTSILAQIEQEKIELQQAVDAESMPTSVERFRRHRRYCLERHLGRLEVLHPRKP-AGIFKGQSVFLRCHIQKLQSARLWLRQGRIIKEEEKNQPIKQLTRKRDTRKGYNDTQQREVALYGRWQTDAFVPPIVVDGIVPKNEHGNIELWSEHHLPVGATHLRMRHITSAASKLGIDYAPALIGFETKNGMNYPKFDGIIVASSHEQLLIDAQAHLEQEKIEHAIKRNQNLIHKRWKRLVQRLLIRNRLEVDYGKI 571          
BLAST of Gchil1284.t1 vs. uniprot
Match: A0A662YHT1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YHT1_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.790e-45
Identity = 159/614 (25.90%), Postives = 263/614 (42.83%), Query Frame = 0
Query:  193 LRVHAVHLLLLAAHMLRQDCAANDSLCRAVALSLLPHD------AFLSADRLKQRLARFALWMRSTFHAAVLVSHPAQVRAQSVFRRACSASERIVHSARVGRGDIIDIASLACALVRAQNFRCRLVLALQPVPFRIKQGNKEQKLSARRNVVCARANDVTESAL-----------------------------------YAWTEVWSQEHAAWIVVDVFSGQVHQGYSRDIIDIGLLRIPVFDSQFMQSTDCAEGTTNPKRRSSRRQSTRRKKQTRDEPIRNVGEQYYSHVVAVENGRLTDVSRRYVRNWLQAEDYRAKGKLFENVLGNLSVS---------VGTGS--------DEALKKEVEEFESLTAEETVPSTMTAIQKHPRYVLERHIKRYELIWPREPIAGHIKNEPVFLRANVRLLHTKDRWMRQMREVK--QNEKPMK---------SVKSKNGTD-------AQVQLYGEWQTQALKIAACKDGKVPRSMHGNVDLWTAEHLPPGAEHVNVPHAKAAAKKIGVDFAPAMTGFDIRGGRSIPRIEGVVVAAENAALVRDGAREMQRAARERAERRASEEAVAKWAKLVRALVVRHKVKKKYGGV 730
            L +H  HLL+L A  ++     + ++ R + LSL  +       A +    L   L     W R  F  A       +    +    A  A  R+V++    +G   ++A L  AL  A   RCRL  AL P+   +++G   +   ++R     R+  +  S L                                   + W EV  +   +WI VD     V  G  + +                                              EP+R    ++   V   ++G + DV+ RY   W ++ + R      + V+   +           + TGS        D  L  E  + +++T  E +PS++   +KHP Y LERH+ R+E + PR+ + G    +PVFLR++V    +  +W R  REVK  + EKP K         +  + +G+D       A + L+G WQT  ++  A  DG+VP++ +GN+++W+  H+P GA H+ +P  +A A+ +GVDFAPA+ GF++R GR++PR +GVVVA     L+ +     Q+AA ERA       A  +WA+L   L++R ++++ YG V
Sbjct:  216 LALHQSHLLVLLATQIKWSALRSSTVLRGLLLSLTANGNGVDFFADMRTQPLAYSLELLVRWFRQEFQLATSTDEEGEEEEAASGELASEA--RLVNAFFARKGRDFELALLFAALCGALQLRCRLTSALDPLL--VQRGKAFESSMSQRPKTRRRSRPIARSLLKKKLRSEASEDDEMEKDEGNAYNEGDEGVSGGQSFWLWCEVLDERAQSWIHVDAVRRLV--GCPQQV----------------------------------------------EPLRGKAARFSYVVSTQDDGVVVDVTPRYASQWSKSLELRLADSWLKQVIQQFNQDAARQRTLSRLATGSALFAAEDADRLLADEKRKLQAMTLTEGMPSSVEGFRKHPTYCLERHLGRFECLHPRKAV-GLFNGQPVFLRSHVFPAQSAFKWRRLGREVKAGEREKPAKWHSRGGKTETAANSDGSDDDGRPGGASMALFGLWQTAEIEPPAMADGRVPKNKYGNIEVWSPAHIPRGAVHLRLPRIEAVAQALGVDFAPAVVGFELRSGRTVPRTDGVVVAQAAELLLLEAHAHRQQAAIERAIGLNRRLARRRWARLATRLLLRRRLEEDYGAV 776          
BLAST of Gchil1284.t1 vs. uniprot
Match: A0A1Y1YC60_9FUNG (Rad4-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YC60_9FUNG)

HSP 1 Score: 185 bits (470), Expect = 5.930e-45
Identity = 159/600 (26.50%), Postives = 263/600 (43.83%), Query Frame = 0
Query:  192 RLRVHAVHLLLLAAHMLRQDCAANDSLCRAVALSLLPHDAFLSAD-------------RLKQRLARFALWMRSTFHAAVLVSHPAQVRAQSVFRRACSAS----ERIVHSARVGRGDIIDIASLACALVRAQNFRCRLVLALQPVPFRI-----KQGNKE-------------------QKLSARRNVVCARANDVTESALYAWTEVWSQEHAAWIVVDVFSGQVHQGYSRDIIDIGLLRIPVFDSQFMQSTDCAEGTTNPKRRSSRRQSTRRKKQTRDEPIRNVGEQYYSHVVAVE-NGRLTDVSRRYVRNW-LQAEDYRAKGKLFENVLGNLSVSVGTGSDEALKKEVEEFESLTAE--ETVPSTMTAIQKHPRYVLERHIKRYELIWPREPIAGHIKNEPVFLRANVRLLHTKDRWMRQMREVKQNEKPMKSVKSK------------------NGTDAQVQLYGEWQTQALKIAACKDGKVPRSMHGNVDLWTAEHLPPGAEHVNVPHAKAAAKKIGVDFAPAMTGFDIRGGRSIPRIEGVVVAAENAALVRDGAREMQRAARERAERRASEEAVAKWAKLVRALVVRHKVKKKYG 728
            RL  H  HLL L A+ + ++   N+S  RA+ LS LP   + S               R    + + A W  + F   V+ S       + V      A     + + +S    RG       L  AL RA     RLV++LQP P +      K GN +                   ++ S   +V       + E    + ++ + Q+  A     +F  ++   Y+   +                S DC  G  +              + + D P         ++VVA E +G + DV+RRY R W  + +  R             ++S      ++   E+E+ E L+ E  E +P+++ A   HP YVLERH+K++E++ P+ P+ GHI+ EP++ R+ V+  HT + W+++ R VK  E+P+K VK++                     D Q  LYG WQT+  +     DGK+P++  GN+DL+    LP GA H+        AKK+ VD+A A+ GF+    R IP ++G+VV  E+  ++ +   E +R  +E+   +    A+AKW KL+  L + H++K++YG
Sbjct:  347 RLETHKAHLLCLLANGIYRNNICNNSELRALTLSTLPKKIYASLSLETRKDTATVKNSRFLIAIEKLASWWYAYFE--VIGSECQTTDQEEVVESEEVADSMNLQHLTNSLNYPRGSAEVSTQLFVALCRAVGLTARLVISLQPAPLKAPTSSSKNGNSDVSXXXXXXXXXXXXXXXRGKQRSGVADVESGVMKTIKEEVTASKSKYFGQKREAEGEPPLFWAEILSPYNNKWV----------------SVDCVRGLVS---------KVAEMEPSADNPYS------LAYVVAYEADGCIKDVTRRYTRQWGAKTKKLRVPVAKDGYDWWGETLSFYARRYKSQADELEDAELLSCEVSEAMPTSIAAFNNHPLYVLERHLKKFEVLHPQGPVIGHIRGEPIYPRSCVKETHTTETWLKEGRTVKPGEEPVKYVKARVVTINKQRMHNMMAMDSGEAVDPQSALYGIWQTEEYRPPPVVDGKIPKNKFGNIDLYKDSMLPEGAVHLPFKGIARIAKKLEVDYAEAVVGFEFHCRRCIPVVKGIVVPVESKEIIMEAYEEFERNRQEKEFTKLEMAALAKWRKLITGLRIHHRLKEEYG 913          
BLAST of Gchil1284.t1 vs. uniprot
Match: M1V5I1_CYAM1 (Similar to nucleotide excision repair complex subunit XPC n=2 Tax=cellular organisms TaxID=131567 RepID=M1V5I1_CYAM1)

HSP 1 Score: 184 bits (468), Expect = 1.680e-44
Identity = 139/448 (31.03%), Postives = 209/448 (46.65%), Query Frame = 0
Query:  433 RNVGEQYYSHVVAVENGRLTDVSRRYVRNW---LQAEDYRAKGKLFENVLGNLS----------VSVGTGSDEALKK-----------EVEEFESLTAEETVPSTMTAIQKHPRYVLERHIKRYELIWPREPIA--------GHIKNEPVFLRANVRLLHTKDRWMRQMREVKQNEKPMKSVKS---------------------------KNGTDAQVQLYGEWQTQALKIAACKDGKVPR-SMHGNVDLWTAEHLPPGAEHVNVPHAKAAAKKIGVDFAPAMTGFDIRGGRSIPRIEGVVVAAENAALVRDGAREMQRAARERAERRASEEAVAKWAKLVRALVVRHKVKKKYGGVG----GASYESEQKRRGREKAAREKSGMRGAAGDGQRSVSMRTRGAARKAKLMSTEHEH--TFDDGVHVEGDRWLKKCKVCELEVWYERL 814
            R   E+   ++ A+E+G   DV+RRY   +   L+A          E VL  LS                 D+A ++           E  EF  L   E +P +++A++ HP +VLE H+K+YE I P+  I         G I+  PV+ R +V LLHT++RW R+ R V+++E P K V+S                              T    +L+G WQT  +     ++G VPR  + GN++LWT  HLP G  HV++P A   A+++G DF PAM GF++R    +P I GVVV  ENAA + D      +  RERAE+R  E+A+ +W +L+R +V + +++K+YGG       A++ S        KA ++ S    A    +  V   T   A         HEH   F    + +     K+C +C L V YE L
Sbjct:  739 RERAERVVPYIFALEHGFGRDVTRRYTTRFQPVLEARSLDGHRYWTEEVLPMLSPFQPRTHLIETEHDAIDDDAFRERSTLWNALDNLEQNEFWGLHEAEPIPRSISALKNHPAFVLEEHLKKYEAIHPKLAIGNIQRIQPNGRIQTIPVYRRRDVHLLHTRERWFRECRIVRESELPYKIVQSFMSRFRQRXXXXXXXXXXXAPEELEDSSTATAGPTELFGIWQTDPMPRPRAENGIVPRCGLRGNIELWTPNHLPLGTTHVDLPFAAMFARRLGFDFVPAMVGFEVRACGFVPAIRGVVVCTENAAALTDACEAEIKRRRERAEKRMREDALRRWRQLIRTIVAKERLRKRYGGFQVQDTNATFSSR-------KAGKQTSSSSAAEPAKRERVPAATAAGADDDADQRAAHEHEWVFVGASNSQDALGRKQCALCGLCVTYESL 1179          
BLAST of Gchil1284.t1 vs. uniprot
Match: A0A662X493_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X493_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.230e-44
Identity = 154/614 (25.08%), Postives = 273/614 (44.46%), Query Frame = 0
Query:  193 LRVHAVHLLLLAAHMLRQDCAANDSLCRAVALSLLPHD------AFLSADRLKQRLARFALWMRSTFHAAVLVSHPAQVRAQSVFRRACSASERIVHSARVGRGDIIDIASLACALVRAQNFRCRLVLALQPVPFRIKQGNKEQKLSARRNVVCARANDVTESAL-----------------------------------YAWTEVWSQEHAAWIVVDVFSGQVHQGYSRDIIDIGLLRIPVFDSQFMQSTDCAEGTTNPKRRSSRRQSTRRKKQTRDEPIRNVGEQYYSHVVAVEN-GRLTDVSRRYVRNWLQAEDYRAKGKLFENVLGNLSVS---------VGTG-------SDEALKKEVEEFESLTAEETVPSTMTAIQKHPRYVLERHIKRYELIWPREPIAGHIKNEPVFLRANVRLLHTKDRWMRQMREVK--QNEKPMK---------SVKSKNGTD-------AQVQLYGEWQTQALKIAACKDGKVPRSMHGNVDLWTAEHLPPGAEHVNVPHAKAAAKKIGVDFAPAMTGFDIRGGRSIPRIEGVVVAAENAALVRDGAREMQRAARERAERRASEEAVAKWAKLVRALVVRHKVKKKYGGV 730
            L +H  HLL+L A  ++     + ++ R + LSL  +       A +    L   L     W R  F    LV+   +   Q       +   R++++    +G   ++A L  AL  A   RCRL  AL P+   +++G   +   ++R     R+  +  S L                                   + W EV  ++   W+ VD     V  G  + +                                              EP+R    ++ S+VV++++ G + DV+ RY   W ++ + R      + V+ + +           + TG       +D  L  E  + +++T  E +P+++   +KHP Y LERH+ ++E + PR+ + G    +PVFLR++V    +  +W R  REVK  + E+P K         +  + +G+D       A + L+G WQT  ++  A  DG+VP++ +GN+++W+  H+P  A H+ +P  +A A+ +GVDFAPA+ GF++R GR++P+ +G+VVA     L+ D     Q+AA ++A R   + A+ +WAKL R L++R ++++ YG V
Sbjct:  126 LALHQSHLLVLLATQIKWSALRSSTVLRGLLLSLTANSNGVDFFADMRTQPLAYSLELLVRWFRQEFQ---LVTSTDEEEEQEATSGELTTEARLMNAFFARKGRDFELALLFAALCGALQLRCRLTSALDPLL--VQRGKAFESSISQRPKTRRRSRPIARSLLKKKLRSEVSEDDEVEKXXXXXXXXXXXGMTGGQSFWMWCEVLDEKAKNWVHVDAVRRLV--GCPQQV----------------------------------------------EPLRGKTARF-SYVVSIQDDGVIVDVTPRYASQWSKSLELRLADSWLKQVIQHFNQDTVRQRSLSHLTTGPLVTAEDADRLLADEKRKLQAMTLTEGMPTSVEGFRKHPTYCLERHLGQFECLHPRKAV-GLFSGQPVFLRSHVYPAQSAFKWRRLGREVKASEREEPAKWHSRGGKSGNAANSDGSDDDGRPGGASMALFGLWQTVEIEPPAMVDGRVPKNKYGNIEVWSPAHIPRDALHLRLPRIEAVAQALGVDFAPAVVGFELRNGRTVPKTDGIVVAKVAGVLLLDAHAHKQQAAIDKAIRLNRQLALRRWAKLTRRLLLRRRLEEDYGAV 684          
BLAST of Gchil1284.t1 vs. uniprot
Match: M1B9Z6_SOLTU (DNA repair protein xp-C / rad4 n=8 Tax=Solanum TaxID=4107 RepID=M1B9Z6_SOLTU)

HSP 1 Score: 182 bits (461), Expect = 7.340e-44
Identity = 132/406 (32.51%), Postives = 203/406 (50.00%), Query Frame = 0
Query:  442 HVVAVENGRLTDVSRRYVRNWLQAEDYRAKGKLFENVLGNLSV--SVGTG-----SDEALKKEVEEFESLTAE--ETVPSTMTAIQKHPRYVLERHIKRYELIWPREPIAGHIKNEPVFLRANVRLLHTKDRWMRQMREVKQNEKPMK----SVKSKNGTDAQ------------VQLYGEWQTQALKIAACKDGKVPRSMHGNVDLWTAEHLPPGAEHVNVPHAKAAAKKIGVDFAPAMTGFDIRGGRSIPRIEGVVVAAE--NAALVRDGAREMQRAARERAERRASEEAVAKWAKLVRALVVRHKVKKKYGGVGGASYESEQKRRGREKAAREKSGMRGAAGDGQRSVSMRTRGAARK---AKLMSTEHEHTF---DDGVHVEGDRWLKKCKVCELEVWYERL 814
            +VVA       DV+RRY   W +    R     ++ VL  L    SV T      +  A +  +E+ E  T E  E +P+   A + H  Y++ER + + ++++P+ P+ G     PV+ R+ VR L  K+RW+R+  +VK NE P K    S K   G D +            V LYG+WQT+ L +    +G VP++  G VD+W+ + LPPG  H+ +P     AK++ +DF+PAM GF+ R GRS+P  EG+VV  E  +A L      E++R A+ER  RR   EA+++W +L+ +L+ R ++  +Y  V GAS +S          + EKS +     +  RS        A+    + +++  HEH F   D  V  E     K+C  C   V YE L
Sbjct:  532 YVVAFAGNGAKDVTRRYCTKWYKIASERVNSIWWDAVLAPLKELESVATSDVVHFAQGATRSSLEDMELETRELTEPLPTNQQAYRSHHLYIIERWLNKNQVLYPKGPVLGFCSGHPVYPRSCVRTLQRKERWLREGLQVKANEIPAKVLKRSGKQNKGQDVEDDDYGEGDCEGTVALYGQWQTEPLFLPPAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRLVPIAKRLQIDFSPAMVGFEFRNGRSLPVYEGIVVCTEFKDAILEAYAEEEVRREAKER--RRTEAEALSRWYQLLSSLITRQRLHNRY--VDGASSQSAVN----IATSNEKSSLLAGGSENTRSAHQEKSEVAKSNTPSFVLAENHEHVFLVEDQTVDEESSTRTKRC-CCGFSVQYEEL 928          
The following BLAST results are available for this feature:
BLAST of Gchil1284.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IM31_9FLOR4.420e-26955.25DNA repair protein RAD4 n=1 Tax=Gracilariopsis cho... [more]
R7QHI9_CHOCR4.150e-14340.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2W336_GALSU6.730e-4734.80Nucleotide excision repair complex subunit XPC-lik... [more]
A0A4P9XQY8_9FUNG8.450e-4729.25Uncharacterized protein n=1 Tax=Thamnocephalis sph... [more]
F0W8D5_9STRA2.940e-4627.03DNA repair protein putative n=1 Tax=Albugo laibach... [more]
A0A662YHT1_9STRA2.790e-4525.90Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A1Y1YC60_9FUNG5.930e-4526.50Rad4-domain-containing protein n=1 Tax=Basidiobolu... [more]
M1V5I1_CYAM11.680e-4431.03Similar to nucleotide excision repair complex subu... [more]
A0A662X493_9STRA2.230e-4425.08Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
M1B9Z6_SOLTU7.340e-4432.51DNA repair protein xp-C / rad4 n=8 Tax=Solanum Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018327Rad4 beta-hairpin domain 2SMARTSM01031BHD_2_2coord: 559..604
e-value: 2.3E-7
score: 40.5
IPR018326Rad4 beta-hairpin domain 1SMARTSM01030BHD_1_2coord: 506..557
e-value: 7.1E-13
score: 58.8
IPR018326Rad4 beta-hairpin domain 1PFAMPF10403BHD_1coord: 508..556
e-value: 2.8E-11
score: 43.2
IPR018328Rad4 beta-hairpin domain 3SMARTSM01032BHD_3_2coord: 613..687
e-value: 2.2E-20
score: 83.7
IPR018328Rad4 beta-hairpin domain 3PFAMPF10405BHD_3coord: 613..684
e-value: 4.5E-19
score: 68.6
IPR018325Rad4/PNGase transglutaminase-like foldPFAMPF03835Rad4coord: 424..471
e-value: 1.2E-4
score: 21.8
IPR042488Rad4, beta-hairpin domain 3 superfamilyGENE3D3.30.70.2460coord: 619..692
e-value: 3.7E-20
score: 73.7
IPR036985Transglutaminase-like superfamilyGENE3D3.90.260.10coord: 179..508
e-value: 6.2E-35
score: 122.9
NoneNo IPR availableGENE3D2.20.20.110coord: 510..558
e-value: 1.3E-7
score: 33.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 737..753
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 734..779
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..57
IPR002931Transglutaminase-likePFAMPF01841Transglut_corecoord: 271..369
e-value: 5.3E-8
score: 33.3
IPR004583DNA repair protein Rad4PANTHERPTHR12135DNA REPAIR PROTEIN XP-C / RAD4coord: 109..331
coord: 349..790
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 196..521

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:36973..39417 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1284.t1Gchil1284.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 36973..39417 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1284.t1 ID=Gchil1284.t1|Name=Gchil1284.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=815bp
MGQRAAPDASVGRGPKAVETKRICVRLVRLVQPPATMSDAEPPATLNGLS
QSAVSHALTRAHKRKRARYNNVAPADSAPPLLVQQRASGASVPYQKRRRT
SLIPLPNGSDDGDSNDEWEEHVHVDQRAVHAASASASVPPPSAAAAAAAP
SGGHDARVPQPVDDGAPRQSQLTELQKSKLRRKMGAQLRRSRLRVHAVHL
LLLAAHMLRQDCAANDSLCRAVALSLLPHDAFLSADRLKQRLARFALWMR
STFHAAVLVSHPAQVRAQSVFRRACSASERIVHSARVGRGDIIDIASLAC
ALVRAQNFRCRLVLALQPVPFRIKQGNKEQKLSARRNVVCARANDVTESA
LYAWTEVWSQEHAAWIVVDVFSGQVHQGYSRDIIDIGLLRIPVFDSQFMQ
STDCAEGTTNPKRRSSRRQSTRRKKQTRDEPIRNVGEQYYSHVVAVENGR
LTDVSRRYVRNWLQAEDYRAKGKLFENVLGNLSVSVGTGSDEALKKEVEE
FESLTAEETVPSTMTAIQKHPRYVLERHIKRYELIWPREPIAGHIKNEPV
FLRANVRLLHTKDRWMRQMREVKQNEKPMKSVKSKNGTDAQVQLYGEWQT
QALKIAACKDGKVPRSMHGNVDLWTAEHLPPGAEHVNVPHAKAAAKKIGV
DFAPAMTGFDIRGGRSIPRIEGVVVAAENAALVRDGAREMQRAARERAER
RASEEAVAKWAKLVRALVVRHKVKKKYGGVGGASYESEQKRRGREKAARE
KSGMRGAAGDGQRSVSMRTRGAARKAKLMSTEHEHTFDDGVHVEGDRWLK
KCKVCELEVWYERL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018327BHD_2
IPR018326Rad4_beta-hairpin_dom1
IPR018328Rad4_beta-hairpin_dom3
IPR018325Rad4/PNGase_transGLS-fold
IPR042488Rad4_BHD3_sf
IPR036985Transglutaminase-like_sf
IPR002931Transglutaminase-like
IPR004583DNA_repair_Rad4
IPR038765Papain-like_cys_pep_sf