Gchil1259.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1259.t1
Unique NameGchil1259.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length198
Homology
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BLAST of Gchil1259.t1 vs. uniprot
Match: A0A2V3IJE6_9FLOR (PRA1 family protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJE6_9FLOR)

HSP 1 Score: 215 bits (547), Expect = 7.080e-68
Identity = 119/204 (58.33%), Postives = 154/204 (75.49%), Query Frame = 0 
Query:    1 MSYGSAADEERSLAYAESKPMPSADASKSRATAAASDVQLNNVGEA-PQH-LSPTADRLVTCGRNTWRDCRPWPEFYSTRALSVPQFAALSERVAKNLHVYRANYTVLVAFWFVLMLLGSIPSVIIAALLFFAVERWAARR-----NGLSPRDKVVVAFLVLLVIWLTDIGRYAITSLLFSCLSVALHATFHETDVVETEIATV 197
            MSYGSAADEE +L+YAE +   +A ++KSR+  A         G   PQH +S    R++T  + TWR CRPW EFYSTRALS+PQFA+LS+RV+ NLHVYRANY V+VAFW V +LL SIPS ++AA++FFA+ER+ ARR     N L  RDK+V+A +VLLVIWLTDIG +A+++L+ S ++V++HATFHETD VETEIATV
Sbjct:    1 MSYGSAADEETALSYAEPRHA-AASSAKSRSLPATMHADTPQNGSVDPQHSISTATQRVITYAQTTWRQCRPWKEFYSTRALSLPQFASLSDRVSVNLHVYRANYQVIVAFWIVGVLLRSIPSFLLAAVIFFAIERYIARRMLMNNNVLPARDKLVIALIVLLVIWLTDIGSFAVSALVLSAITVSIHATFHETDAVETEIATV 203
The following BLAST results are available for this feature:
BLAST of Gchil1259.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IJE6_9FLOR7.080e-6858.33PRA1 family protein n=1 Tax=Gracilariopsis chorda ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 65..188
e-value: 2.3E-15
score: 56.5
IPR004895Prenylated rab acceptor PRA1PANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 22..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 169..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..168
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..147
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
NoneNo IPR availableTMHMMTMhelixcoord: 149..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004437_piloncontigtig00004437_pilon:817744..818337 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1259.t1Gchil1259.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004437_pilon 817744..818337 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1259.t1 ID=Gchil1259.t1|Name=Gchil1259.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=198bp
MSYGSAADEERSLAYAESKPMPSADASKSRATAAASDVQLNNVGEAPQHL
SPTADRLVTCGRNTWRDCRPWPEFYSTRALSVPQFAALSERVAKNLHVYR
ANYTVLVAFWFVLMLLGSIPSVIIAALLFFAVERWAARRNGLSPRDKVVV
AFLVLLVIWLTDIGRYAITSLLFSCLSVALHATFHETDVVETEIATV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1