Gchil1213.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1213.t1
Unique NameGchil1213.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length178
Homology
BLAST of Gchil1213.t1 vs. uniprot
Match: A0A2V3IKE3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKE3_9FLOR)

HSP 1 Score: 283 bits (723), Expect = 2.060e-95
Identity = 132/175 (75.43%), Postives = 152/175 (86.86%), Query Frame = 0
Query:    1 MGRLECCRIILYIVEWIWTTVVMAIFPNKLAVEAPTVNGAFENICLFNANVGRSRCQYGVAWATVAFVVLSITMIWYFLDYCSNIQLPANVEFIIFSWLALWWFVGSVTLTATKSSRAPSPSNVPVVFAWMLFILSMISAYIGSRGPKTFEYRMSETEPEPEGSYRSYGEGSSYQ 175
            MGRLECCRIILY++EWIWTTV+M IFPN+L +EAPTVNG FE++CLFNANVG SRCQYGVAWATV +V+L+IT+IWYFLDYCS++ LPANVE I+F+WLALWWFVGS+TLTATKSSRAPSPSNVPV FAWML    +ISAYI SRGPK+FEYR SET+ E     RSY +  SYQ
Sbjct:    1 MGRLECCRIILYVIEWIWTTVIMGIFPNQLKIEAPTVNGTFEDVCLFNANVGTSRCQYGVAWATVGWVILTITIIWYFLDYCSSVFLPANVEIIMFTWLALWWFVGSITLTATKSSRAPSPSNVPVAFAWMLVFFCIISAYIASRGPKSFEYRFSETDAERSYDDRSYDQ--SYQ 173          
BLAST of Gchil1213.t1 vs. uniprot
Match: A0A2V3II13_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II13_9FLOR)

HSP 1 Score: 94.0 bits (232), Expect = 5.460e-22
Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = 0
Query:   79 LDYCSNIQLPANVEFIIFSWLALWWFVGSVTLTATKSSRAPSPSNVPVVFAWMLFILSMISAYIGSRGP 147
            ++YCS ++LP   E +IF WL LWW VGS+ LT  KSSRAPS + VPVV AW+LF L +ISA + SRGP
Sbjct:    1 MEYCSKVRLPERTEMLIFLWLGLWWLVGSIALTIVKSSRAPSIAVVPVVLAWILFALCLISALVASRGP 69          
BLAST of Gchil1213.t1 vs. uniprot
Match: A0A7J7IG31_9RHOD (MARVEL domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IG31_9RHOD)

HSP 1 Score: 70.5 bits (171), Expect = 3.020e-11
Identity = 39/131 (29.77%), Postives = 67/131 (51.15%), Query Frame = 0
Query:   10 ILYIVEWIWTTVVMAIFPNKLAVEAPTVNGAFENICLFNANVGRSRCQYGVAWATVAFVVLSITMIWYFLDYCSNIQLPANVEFIIFSWLALWWFVGSVTLTATKSSRAPSPS--NVPVVFAWMLFILSMI 138
            +LY++E+ W  VV  +  N L       NG     C  ++    + C+Y +A   + +V++ I  I YF        LP   E I+  +L +WWF+GSV ++A   S +P+    N  + F+WMLF++ ++
Sbjct:  139 LLYLLEFTWAIVVFGVTANTL------YNGTH---CSLSSTDSTALCRYAIALGVIGWVIVLILAIIYFGTNALAKNLPPVYEMIVQIFLTVWWFIGSVVISADLGSASPNQVDINTVIAFSWMLFVMHLV 260          
BLAST of Gchil1213.t1 vs. uniprot
Match: M1VAW8_CYAM1 (MARVEL domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1VAW8_CYAM1)

HSP 1 Score: 70.1 bits (170), Expect = 4.580e-11
Identity = 39/137 (28.47%), Postives = 71/137 (51.82%), Query Frame = 0
Query:    8 RIILYIVEWIWTTVVMAIFPNKLAVEAPTVNGAFENICLFNANVGRSRCQYGVAWATVAFVVLSITMIWYFLDYCSNIQLPANVEFIIFSWLALWWFVGSVTLTATKSSRAPSPS--NVPVVFAWMLFILSMISAYI 142
            + +LY+ E+ W  VV  +  N L       NG+    C  ++    + C+Y +A   + +V++ I  + YF        LP   E I+  +L +WWF+GSV ++A+  S +P+    N  + F+WMLF++ ++ + I
Sbjct:  137 KTLLYLCEFTWAIVVFGVTANSL------YNGSQ---CALSSTNSTALCRYAIALGVIGWVLVLILSVVYFATNALARILPPVYEMIVQLFLMVWWFIGSVVISASLGSSSPNQVSINTVIAFSWMLFVMHLVHSGI 264          
BLAST of Gchil1213.t1 vs. uniprot
Match: A0A7S0G2A0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2A0_9RHOD)

HSP 1 Score: 63.9 bits (154), Expect = 9.120e-10
Identity = 31/103 (30.10%), Postives = 58/103 (56.31%), Query Frame = 0
Query:   43 NICLF----NANVGRSRCQYGVAWATVAFVVLSITMIWYFLDYCSNIQLPANVEFII-FSWLALWWFVGSVTLTATKSSRAPSPSNVPVVFAWMLFILSMISA 140
            +IC+F    + +   S   + +AW  +AF++L++ +IW  +DY +N   PA +EF      + ++WF+G + ++A +SS         + F W+ F+L +ISA
Sbjct:   20 SICIFAIAADISFRTSIVNFAIAWGVIAFLILTLMLIWSIMDYFTNYHFPAMIEFYAQLGLVVIFWFIGGICVSAVQSSAGNW--GAVIAFFWVNFVLGIISA 120          
BLAST of Gchil1213.t1 vs. uniprot
Match: A0A7S3A557_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A557_9RHOD)

HSP 1 Score: 62.8 bits (151), Expect = 2.390e-9
Identity = 33/103 (32.04%), Postives = 58/103 (56.31%), Query Frame = 0
Query:   43 NICLF----NANVGRSRCQYGVAWATVAFVVLSITMIWYFLDYCSNIQLPANVEFIIFSWLA-LWWFVGSVTLTATKSSRAPSPSNVPVVFAWMLFILSMISA 140
            +IC+F    + N   S   + +AW  +AF+ L++ +IW  +DY +N   PA  EF     L  ++WF+G ++++A + +   S  N  + F W+ F+L +ISA
Sbjct:   20 SICIFAIAADENFRSSIVSFAIAWGVLAFIPLTLLLIWSIMDYFTNYHFPAMYEFYAQCVLVVIFWFIGGISVSAVRPAFE-SNWNAVIAFFWVNFVLGIISA 121          
The following BLAST results are available for this feature:
BLAST of Gchil1213.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IKE3_9FLOR2.060e-9575.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II13_9FLOR5.460e-2259.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7J7IG31_9RHOD3.020e-1129.77MARVEL domain-containing protein n=1 Tax=Cyanidioc... [more]
M1VAW8_CYAM14.580e-1128.47MARVEL domain-containing protein n=2 Tax=cellular ... [more]
A0A7S0G2A0_9RHOD9.120e-1030.10Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A557_9RHOD2.390e-932.04Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 9..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..144
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..123
NoneNo IPR availableTMHMMTMhelixcoord: 127..144
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 93..112
NoneNo IPR availableTMHMMTMhelixcoord: 9..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004437_piloncontigtig00004437_pilon:171227..171933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1213.t1Gchil1213.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004437_pilon 171227..171933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1213.t1 ID=Gchil1213.t1|Name=Gchil1213.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=178bp
MGRLECCRIILYIVEWIWTTVVMAIFPNKLAVEAPTVNGAFENICLFNAN
VGRSRCQYGVAWATVAFVVLSITMIWYFLDYCSNIQLPANVEFIIFSWLA
LWWFVGSVTLTATKSSRAPSPSNVPVVFAWMLFILSMISAYIGSRGPKTF
EYRMSETEPEPEGSYRSYGEGSSYQQA*
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