Gchil1212.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil1212.t1 vs. uniprot
Match: A0A6T6CQV1_9RHOD (30S ribosomal protein S17, chloroplastic n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CQV1_9RHOD) HSP 1 Score: 129 bits (323), Expect = 1.510e-33 Identity = 75/158 (47.47%), Postives = 99/158 (62.66%), Query Frame = 0
Query: 62 YRTQRKAVYRLPFYGASDAAFDRLSEHQVRTALRAYGGLIRPRDDLQTLFHRLKRLANAA-YRPKQLTIEGVVVSNKMRKSVVIAAKRLCFSSKLQKSYYKTRRFMAHDELNLCREGDRVVIRSCRLMSKRKSHVVVLNFGD-----PTRPGLDQRSI 213
YRTQR +YR PF AS A LS+ +V AL++YGGL+R + RL RL A R KQL + G+VVSNKM K+VV+ +R + KL+ +++ R FMAHDE N CREGDRVVI+ CR +S+ K+ VVV N+G R G+D RS+
Sbjct: 58 YRTQRPPIYRAPFLNASADAVRSLSDEEVTQALKSYGGLLRGSHE-----ERLVRLLRAVKVRQKQL-VRGIVVSNKMDKTVVVEVRRNAYDHKLKVRFFRRRNFMAHDEENSCREGDRVVIKECRPLSRHKAFVVVENYGHFSTTPQRREGVDPRSL 209
BLAST of Gchil1212.t1 vs. uniprot
Match: M1VBT5_CYAM1 (30S ribosomal protein S17, chloroplastic n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VBT5_CYAM1) HSP 1 Score: 116 bits (290), Expect = 2.920e-28 Identity = 64/133 (48.12%), Postives = 86/133 (64.66%), Query Frame = 0
Query: 69 VYRLPFYGASDAAFDRLSEHQVRTALRAYGGLIRPRDDLQTLFHRLKRLANAAYRPKQLTIEGVVVSNKMRKSVVIAAKRLCFSSKLQKSYYKTRRFMAHDELNLCREGDRVVIRSCRLMSKRKSHVVVLNFG 201
VY P++GA LS +++ ALRAYGGL+RP D+ + L KRL + R + I GVVVSN +K+VV+AA+RL + K++ + TRRFMAHDE + C GD+V IR CR +S+RK VVV NFG
Sbjct: 72 VYTAPYFGAPIEQVQSLSLDELKQALRAYGGLVRPTDNQEVL---CKRLLSLTRRRRAQCIHGVVVSNAPQKTVVVAARRLRYEPKIKTYRFVTRRFMAHDEEDRCLLGDKVTIRLCRPLSRRKRFVVVENFG 201
BLAST of Gchil1212.t1 vs. uniprot
Match: A0A7S0T7F6_9RHOD (30S ribosomal protein S17, chloroplastic (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7F6_9RHOD) HSP 1 Score: 100 bits (250), Expect = 1.550e-22 Identity = 64/179 (35.75%), Postives = 92/179 (51.40%), Query Frame = 0
Query: 66 RKAVYRLPFYGASDAAFDRLSEHQVRTALRAYGGLIR---------------PRDDLQTLFHR----------LKRLANAAYRPKQLTIEGVVVSNKMRKSVVIAAKRLCFSSKLQKSYYKTRRFMAHDELNLCREGDRVVIRSCRLMSKRKSHVVVLNFGDPT-RPGLDQRSIQLENI 218
R VY +P A D + L++YGGL + R+ L+ + R +KRL + K+ + GVVVS+ M++ VVIA +R + SKL K ++KTRRF AHDE NLCREGD V I+S R + KSH V+ N+GDP + D R+ +L+ +
Sbjct: 16 RPPVYTMPLLEADPEDIDNTDVEYLLKVLKSYGGLCKLTLKGYETGQTNKVLRRNTLRYIHQRHMIPRIMRDRVKRLVTV--KSKEQIVHGVVVSHGMKRGVVIAVRRRFYVSKLNKWFFKTRRFKAHDEFNLCREGDEVAIKSVRRLGPDKSHTVIENYGDPLLKSTKDDRAERLKQL 192
BLAST of Gchil1212.t1 vs. uniprot
Match: M2VV19_GALSU (30S ribosomal protein S17, chloroplastic n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VV19_GALSU) HSP 1 Score: 97.1 bits (240), Expect = 1.070e-20 Identity = 57/153 (37.25%), Postives = 89/153 (58.17%), Query Frame = 0
Query: 61 EYRTQR-KAVYRLPFYGASDAAFDRLSEHQVRTALRAYGGLIRPRDDLQTLFHRLKRLANAAYRPKQLTIEGVVVSNKMRKSVVIAAKRLCFSSKLQKSYYKTRRFMAHDELNLCREGDRVVIRSCRLMSKRKSHVVVLNFGD--PTRPGLDQ 210
EY R + +Y+ P++ A LS ++ +AL+ Y G ++ D + L +RL + RP++L I G V S +M K+ + ++R CF +L+ ++ R+FMAHDE NLC EGD V+IR CR +S RK VVV N+G PT +++
Sbjct: 108 EYEPDRDRLIYQAPYFQAPIELIRSLSTEEIISALKEYAGFLK--GDREILLNRL--IFYTRPRPEEL-IHGKVSSTRMNKTATVVSRRPCFYKRLKVRTFRFRKFMAHDEFNLCDEGDEVLIRHCRPLSDRKRFVVVENYGKRIPTMANMEE 255
BLAST of Gchil1212.t1 vs. uniprot
Match: A0A2V2RIV4_9BACT (30S ribosomal protein S17 n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V2RIV4_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 5.300e-16 Identity = 45/86 (52.33%), Postives = 56/86 (65.12%), Query Frame = 0
Query: 118 ANAAYRPKQLTIEGVVVSNKMRKSVVIAAKRLCFSSKLQKSYYKTRRFMAHDELNLCREGDRVVIRSCRLMSKRKSHVVVLNFGDP 203
A AA R Q T+EG VVSN+M+KSVV+ +R S QK+ K+ +FMAHDE N CR GDRVVIR R +SKRK+ V+ P
Sbjct: 26 AEAAERRLQKTLEGTVVSNRMQKSVVVRVERQVRHSLYQKTIRKSSKFMAHDEENKCRVGDRVVIRETRPISKRKNWRVISIISSP 111
BLAST of Gchil1212.t1 vs. uniprot
Match: A0A5J4Z5E7_PORPP (30S ribosomal protein S17, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5E7_PORPP) HSP 1 Score: 83.2 bits (204), Expect = 3.900e-15 Identity = 54/165 (32.73%), Postives = 81/165 (49.09%), Query Frame = 0
Query: 64 TQRKAVYRLPFYGASDAAFDRLSEHQVRTALRAYG--------GLIRPRDDLQTLFHRLKRLANAAYRP-----------------KQLTIEGVVVSNKMRKSVVIAAKRLCFSSKLQKSYYKTRRFMAHDELNLCREGDRVVIRSCRL--MSKRKSHVVVLNFG 201
T R VY LP+ A D + + +R L+AYG G I+P+ Q+ + K+L N KQ G VVSNKM ++V +A + + + K K Y+K +F AHDE NLCREGD V I+ + +++RK+ V++ N+G
Sbjct: 124 TFRTPVYTLPYLEAPDEEIATMDKDMIRVLLKAYGERVWVPMKGYIKPKGK-QSRIEKNKKLLNEQKEQWPEIWRRRLRISTQITNKQQVKRGTVVSNKMDRTVNVAVRVVKYVPKFNKHYFKHHKFFAHDEYNLCREGDEVAIKQLKTGNLTERKNWVIIENYG 287
BLAST of Gchil1212.t1 vs. uniprot
Match: UPI001CB9A024 (30S ribosomal protein S17-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9A024) HSP 1 Score: 71.2 bits (173), Expect = 1.400e-12 Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 0
Query: 128 TIEGVVVSNKMRKSVVIAAKRLCFSSKLQKSYYK-TRRFMAHDELNLCREGDRVVIRSCRLMSKRKSHVV 196
++ GVVVSNKM KSVV+A RL + SKL Y K T +FMAHDELN C +GDRV + R +SKRK+ VV
Sbjct: 3 SVTGVVVSNKMTKSVVVAVDRL-YHSKLFNRYVKRTSKFMAHDELNQCNQGDRVRLDPSRPLSKRKNWVV 71
BLAST of Gchil1212.t1 vs. uniprot
Match: A0A1J4X7I4_9PROT (30S ribosomal protein S17 n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A1J4X7I4_9PROT) HSP 1 Score: 69.3 bits (168), Expect = 5.010e-12 Identity = 32/72 (44.44%), Postives = 51/72 (70.83%), Query Frame = 0
Query: 121 AYRPKQLTIEGVVVSNKMRKSVVIAAKRLCFSSKLQKSYYKTRRFMAHDELNLCREGDRVVIRSCRLMSKRK 192
A R + T+EGVVVS+KM K++V+ +RL +K+ +++++ AHDE N CREGDRV++ +CR ++K K
Sbjct: 3 ASRGRARTLEGVVVSDKMEKTIVVKVERLVQHPLYKKTIRRSKKYKAHDETNACREGDRVLLTACRPLAKDK 74
BLAST of Gchil1212.t1 vs. uniprot
Match: A0A7C3TAU3_9BACT (30S ribosomal protein S17 n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3TAU3_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 8.850e-12 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 0
Query: 128 TIEGVVVSNKMRKSVVIAAKRLCFSSKLQKSYYKTRRFMAHDELNLCREGDRVVIRSCRLMSKRKSHVVV 197
T EGVVVSNKM K+VV+A +RL + +T + AHDE N C EGDRVVI++CR +SK KS V+
Sbjct: 8 TREGVVVSNKMDKTVVVAVERLTRHPLYGRVMRRTTKHKAHDERNECNEGDRVVIQACRPLSKEKSWRVI 77
BLAST of Gchil1212.t1 vs. uniprot
Match: A0A8F0F7M3_9PHAE (Ribosomal protein S17 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7M3_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 1.240e-11 Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 0
Query: 131 GVVVSNKMRKSVVIAAKRLCFSSKLQKSYYKTRRFMAHDELNLCREGDRVVIRSCRLMSKRKSHVV 196
G+V+SNKM+KSVVIA + C K +TRR++AHDE NLC GD V++ R +SK+K V+
Sbjct: 8 GIVISNKMQKSVVIAVEHRCKHQFYSKIIVRTRRYLAHDEFNLCNIGDEVLVEESRPLSKKKRWVI 73 The following BLAST results are available for this feature:
BLAST of Gchil1212.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil1212.t1 ID=Gchil1212.t1|Name=Gchil1212.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=221bpback to top |