Gchil10999.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10999.t1
Unique NameGchil10999.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length275
Homology
BLAST of Gchil10999.t1 vs. uniprot
Match: A0A2V3IKM6_9FLOR (Zinc finger protein GLIS2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKM6_9FLOR)

HSP 1 Score: 289 bits (740), Expect = 7.630e-95
Identity = 154/274 (56.20%), Postives = 198/274 (72.26%), Query Frame = 0
Query:    1 MNGVHQLQQHAELQAALQSTLSHPTAGNVCPVCRKAFDRMYNLKVHFRKHTGETPYTCPVQNCAKQFRWRSSMAHHVRAHHDASETAGVSLRTSTDAQGAKGNAKAQTPSVVTRPLRTTSSISQVSGIQKPQRKRTPKVSKAAKRRQSVSSPSALQDSVNGLHAEPESPPLLTISADPLRLADECHSNDAELLCILPDVLSGESDILDDSDEMGSSVPSTFADDPLEESADVMLFLVTGPEDVENAALKVLDGDESLKAAVEATNLPMNQYSWM 274
            M+G++ LQQH + Q  +Q T    T+GN+CPVC K FDRMYNLKVHFRKHTGETPY+CPV+NC+KQFRWRSSMAHHVRAHHDASETAGVSL+TSTDA G+K   +  T S   + +  T  +S + GI+K QRKR    +K AK+RQ+  SPSA +DSV    A+PESPPLL+ISADP+R   E  S D  L  I PD LSG+++IL++ D +       F +DPL + +DVMLFLV+ P+D ENA L+ +  D +L+AAVEA  +P++QY+ M
Sbjct:   10 MSGMYNLQQHQQFQPVVQVTTPRSTSGNICPVCSKTFDRMYNLKVHFRKHTGETPYSCPVRNCSKQFRWRSSMAHHVRAHHDASETAGVSLKTSTDANGSKSATR--TTSSPKKSVVATRPLSDLGGIKKSQRKRK---TKTAKKRQNAVSPSAPRDSVIEPFAQPESPPLLSISADPVRQGHEYESVDTALFDIFPDELSGQTEILENVDGLQPPDFPAFTEDPLNDHSDVMLFLVSSPDDAENAELESIARDATLRAAVEAVAMPVSQYNLM 278          
BLAST of Gchil10999.t1 vs. uniprot
Match: A0A7S0BUE7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BUE7_9RHOD)

HSP 1 Score: 69.3 bits (168), Expect = 4.820e-10
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   30 CPVCRKAFDRMYNLKVHFRKHTGETPYTCPVQNCAKQFRWRSSMAHHVRAH 80
            C  C K F + YNLK+H R HTGETP+ C  + C+ +F+WRSS+ +H+R H
Sbjct:   64 CSHCHKQFKKRYNLKIHQRSHTGETPFECSFEGCSLKFKWRSSLINHLRYH 114          
BLAST of Gchil10999.t1 vs. uniprot
Match: A0A7S3EJL1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJL1_9RHOD)

HSP 1 Score: 69.3 bits (168), Expect = 5.030e-10
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   30 CPVCRKAFDRMYNLKVHFRKHTGETPYTCPVQNCAKQFRWRSSMAHHVRAH 80
            C  C K F + YNLK+H R HTGETP+ C  + C+ +F+WRSS+ +H+R H
Sbjct:   64 CSHCHKQFKKRYNLKIHQRSHTGETPFECSFEGCSLKFKWRSSLINHLRYH 114          
BLAST of Gchil10999.t1 vs. uniprot
Match: A0A1X6P9B5_PORUM (C2H2-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9B5_PORUM)

HSP 1 Score: 68.6 bits (166), Expect = 2.000e-9
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0
Query:   30 CPVCRKAFDRMYNLKVHFRKHTGETPYTCPVQNCAKQFRWRSSMAHHV 77
            C VC + F R++N KVH RKH  ETP  CP+  C + F+WR S+AHH+
Sbjct:  483 CEVCGRGFKRLFNRKVHMRKHGEETPVVCPIPGCERSFKWRGSLAHHL 530          
BLAST of Gchil10999.t1 vs. uniprot
Match: A0A409YHA8_9AGAR (Uncharacterized protein n=1 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409YHA8_9AGAR)

HSP 1 Score: 63.9 bits (154), Expect = 4.440e-8
Identity = 30/69 (43.48%), Postives = 39/69 (56.52%), Query Frame = 0
Query:   30 CPVCRKAFDRMYNLKVHFRKHTGETPYTCPVQNCAKQFRWRSSMAHHVRAHHDASETAGVSLRTSTDAQ 98
            C  C K F+R  +LK+H   HTGE P+TCPV+ C + F   S+M  H R H  A +T   S R S+  Q
Sbjct:  232 CSYCGKIFNRPSSLKIHINSHTGEKPFTCPVEGCGRSFSVLSNMRRHTRVHQTA-DTESDSSRPSSSRQ 299          
BLAST of Gchil10999.t1 vs. uniprot
Match: A0A6A4IUN3_9AGAR (Uncharacterized protein n=1 Tax=Gymnopus androsaceus JB14 TaxID=1447944 RepID=A0A6A4IUN3_9AGAR)

HSP 1 Score: 62.4 bits (150), Expect = 1.380e-7
Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 0
Query:   30 CPVCRKAFDRMYNLKVHFRKHTGETPYTCPVQNCAKQFRWRSSMAHHVRAHHDA--SETAGVSL 91
            C  C K F+R  +LK+H   HTGE P+TCPV+ C + F   S+M  H R H+ +  S+   VSL
Sbjct:  198 CSYCGKGFNRPSSLKIHLNSHTGEKPFTCPVEGCGRSFSVLSNMRRHARVHNPSQISDDDNVSL 261          
BLAST of Gchil10999.t1 vs. uniprot
Match: C5DDY8_LACTC (KLTH0C04884p n=1 Tax=Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) TaxID=559295 RepID=C5DDY8_LACTC)

HSP 1 Score: 60.8 bits (146), Expect = 4.980e-7
Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 0
Query:   29 VCPVCRKAFDRMYNLKVHFRKHTGETPYTCPVQNCAKQFRWRSSMAHHVRAH 80
            VC  C K F+R  +L  H   HTG+ P+TCP +NC KQF  RS+M  H + H
Sbjct:  239 VCASCGKCFNRPSSLATHNNTHTGDKPFTCPFENCDKQFNARSNMTRHYKLH 290          
BLAST of Gchil10999.t1 vs. uniprot
Match: A0A3M7NG56_9EURO (Uncharacterized protein (Fragment) n=2 Tax=unclassified Chaetothyriales TaxID=316340 RepID=A0A3M7NG56_9EURO)

HSP 1 Score: 60.5 bits (145), Expect = 6.820e-7
Identity = 26/62 (41.94%), Postives = 34/62 (54.84%), Query Frame = 0
Query:   23 HPTAGNVCPVCRKAFDRMYNLKVHFRKHTGETPYTCPVQNCAKQFRWRSSMAHHVRAHHDAS 84
            H    + C VC K F R  +L+ H   HTGE P+TCPV+NC + F   S++  H R H   S
Sbjct:  277 HTQKKHKCKVCDKRFTRPSSLQTHMYSHTGEKPFTCPVENCGRSFSVVSNLRRHKRVHRSDS 338          
BLAST of Gchil10999.t1 vs. uniprot
Match: A0A3M7NVI3_9EURO (Uncharacterized protein (Fragment) n=2 Tax=unclassified Chaetothyriales TaxID=316340 RepID=A0A3M7NVI3_9EURO)

HSP 1 Score: 59.7 bits (143), Expect = 1.230e-6
Identity = 28/74 (37.84%), Postives = 38/74 (51.35%), Query Frame = 0
Query:   16 ALQSTLSHPTAGNV-----CPVCRKAFDRMYNLKVHFRKHTGETPYTCPVQNCAKQFRWRSSMAHHVRAHHDAS 84
            ++    S   +GN      C VC K F R  +L+ H   HTGE P+TCPV+NC + F   S++  H R H   S
Sbjct:  263 SMMGQFSSKLSGNTQKKHKCKVCDKRFTRPSSLQTHMYSHTGEKPFTCPVENCGRSFSVVSNLRRHKRVHRSDS 336          
BLAST of Gchil10999.t1 vs. uniprot
Match: UPI0018CD6A26 (zinc finger protein 200-like n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CD6A26)

HSP 1 Score: 55.8 bits (133), Expect = 7.130e-6
Identity = 25/55 (45.45%), Postives = 33/55 (60.00%), Query Frame = 0
Query:   30 CPVCRKAFDRMYNLKVHFRKHTGETPYTCPVQNCAKQFRWRSSMAHH--VRAHHD 82
            CP C K F R + L  H R HTGE P+ CP   CA+++  RS++  H  +R HHD
Sbjct:   96 CPKCFKQFSRNWVLLGHIRMHTGEKPFRCPEDTCARRYSDRSNLRAHQRMRGHHD 150          
The following BLAST results are available for this feature:
BLAST of Gchil10999.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3IKM6_9FLOR7.630e-9556.20Zinc finger protein GLIS2 n=1 Tax=Gracilariopsis c... [more]
A0A7S0BUE7_9RHOD4.820e-1050.98Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3EJL1_9RHOD5.030e-1050.98Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6P9B5_PORUM2.000e-952.08C2H2-type domain-containing protein n=1 Tax=Porphy... [more]
A0A409YHA8_9AGAR4.440e-843.48Uncharacterized protein n=1 Tax=Gymnopilus dilepis... [more]
A0A6A4IUN3_9AGAR1.380e-743.75Uncharacterized protein n=1 Tax=Gymnopus androsace... [more]
C5DDY8_LACTC4.980e-748.08KLTH0C04884p n=1 Tax=Lachancea thermotolerans (str... [more]
A0A3M7NG56_9EURO6.820e-741.94Uncharacterized protein (Fragment) n=2 Tax=unclass... [more]
A0A3M7NVI3_9EURO1.230e-637.84Uncharacterized protein (Fragment) n=2 Tax=unclass... [more]
UPI0018CD6A267.130e-645.45zinc finger protein 200-like n=1 Tax=Teleopsis dal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 56..80
e-value: 0.0024
score: 27.1
coord: 28..50
e-value: 0.047
score: 22.8
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 29..50
e-value: 2.7E-4
score: 21.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 58..81
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 30..50
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 28..55
score: 13.027163
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 56..85
score: 10.72024
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 52..94
e-value: 2.9E-9
score: 38.4
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 29..51
e-value: 5.5E-9
score: 37.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..158
NoneNo IPR availablePANTHERPTHR19818ZINC FINGER PROTEIN ZIC AND GLIcoord: 28..155
NoneNo IPR availablePANTHERPTHR19818:SF143LD47926P-RELATEDcoord: 28..155
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 29..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000021_piloncontigtig00000021_pilon:153958..154873 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10999.t1Gchil10999.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000021_pilon 153958..154873 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10999.t1 ID=Gchil10999.t1|Name=Gchil10999.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=275bp
MNGVHQLQQHAELQAALQSTLSHPTAGNVCPVCRKAFDRMYNLKVHFRKH
TGETPYTCPVQNCAKQFRWRSSMAHHVRAHHDASETAGVSLRTSTDAQGA
KGNAKAQTPSVVTRPLRTTSSISQVSGIQKPQRKRTPKVSKAAKRRQSVS
SPSALQDSVNGLHAEPESPPLLTISADPLRLADECHSNDAELLCILPDVL
SGESDILDDSDEMGSSVPSTFADDPLEESADVMLFLVTGPEDVENAALKV
LDGDESLKAAVEATNLPMNQYSWM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf