Gchil1083.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil1083.t1
Unique Name	Gchil1083.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	509

Homology

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BLAST of Gchil1083.t1 vs. uniprot
Match: A0A2V3INU1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INU1_9FLOR)

HSP 1 Score: 488 bits (1257), Expect = 1.430e-165
Identity = 262/513 (51.07%), Postives = 352/513 (68.62%), Query Frame = 0

Query:    1 MTELVLRPLQELFKDDIVHRAALAAVVRGNAVGVRTAPIFLRAIGIPNVISGR----RGSLVISQGVRIGLMIFFIFSLALFERSVNQIRVPILSKVSTTSLLHVDSLSDIEGRVTLMSPFPAFGLNEEEAVNISSFSPTGTNSNQSYIVREKSNLASKYISSCVRQINDTYTVAYVGAVAKTKGTQTIQCLDGSGGSDKRTAGEFFSDTI-LAGANITAVSLSRIKNDDGFSTDGVTGVYAAKVVDDRNLIYEGYIAITLRSHFDANVEWSMYGLVRDEGPFVYRVAMRLYKRGATVA-AYPCFDEAPSLKYIGNWSFNGTDYKCPDGVTRPMRRNPEEELQTIALKIFPVSNQVSTQRNGDLLAWITETDFARFAAAETFALEMRTRVRSDRMFYSQKEGENLIVARGEFEEQITIGVWETVVLLVGIGTFLVSIGVSCFWKLYQRQKYRMDSDVVSLDSIARMYCIENTGNNHPGNCLLNIGLSDIQQDAQHLGIVGSGIASVRRPELAL 507
            + ELVLRPLQELFKD  V+ AA + V  GNA+ +R+AP  LRAIGI N +S      R  L+ SQ  RI L++F I + A+FER+V+Q R+  +S  ST+S  + DS+S   G+  LMSPFP FGL E+EA +I+ F  +GTNS+  YIVRE  NLA++YISSCVRQ+ND+YTV YVGAV + +G QT+ CLDG+GGS+ RTA  FFS +  + G N+ +++LSR+ N+ G S+D +TGV+AA +VD+ +  Y+GY A+T RSH+D+NV WS+Y LVR +  FV+RV++RLYK G TV  A PCF E PSLKY G W+F+  +Y CPDG  RP  R  +++LQT++L++FP SNQ  +  NGDLLAW+ ETD+ARF AAE F  E+R+RVRSDRMFYS  EGE L VA G  +E + +G  +TVV L  I T L+   VS      Q ++  + S++VS  ++A MY  E+       +  LN+GL D   D QHLG+V  G+A VRRP + L
Sbjct:   33 VNELVLRPLQELFKDHWVYCAARSVVSGGNAIQIRSAPRLLRAIGIENFVSSPESRPRCRLLASQMFRIVLLVFLIIAAAIFERTVDQKRLATVSTFSTSSPAN-DSISVKTGQTMLMSPFPVFGLTEQEARDIAPFQSSGTNSSSKYIVREHPNLAAQYISSCVRQLNDSYTVVYVGAVVQAEGRQTVMCLDGTGGSENRTAARFFSSSPGVTGVNVKSITLSRLSNEKGLSSDSITGVFAADIVDENDKEYKGYAAVTKRSHYDSNVVWSVYALVRRDDSFVWRVSVRLYKSGQTVCDARPCFGENPSLKYTGTWTFDDDEYICPDGEPRPFIRKEKDKLQTVSLEMFPASNQNESANNGDLLAWLIETDYARFVAAEVFEWELRSRVRSDRMFYSIHEGERLAVADGGVKEVVVMGRTQTVVFLTAIATLLLFTFVSSISNCVQSRRLNLGSEIVSFQAVAGMYRSESGSKAPTRDVALNVGLIDTAHDTQHLGLVDEGMACVRRPFVPL 544

The following BLAST results are available for this feature:

BLAST of Gchil1083.t1 vs. uniprot

BLAST of Gchil1083.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3INU1_9FLOR	1.430e-165	51.07	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 418..437
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..56
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 438..508
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 79..417
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 57..78
None	No IPR available	TMHMM	TMhelix		coord: 415..437

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000172_pilon	contig	tig00000172_pilon:977053..978579 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil1083.t1	Gchil1083.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000172_pilon 977053..978579 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil1083.t1 ID=Gchil1083.t1|Name=Gchil1083.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=509bp
MTELVLRPLQELFKDDIVHRAALAAVVRGNAVGVRTAPIFLRAIGIPNVI
SGRRGSLVISQGVRIGLMIFFIFSLALFERSVNQIRVPILSKVSTTSLLH
VDSLSDIEGRVTLMSPFPAFGLNEEEAVNISSFSPTGTNSNQSYIVREKS
NLASKYISSCVRQINDTYTVAYVGAVAKTKGTQTIQCLDGSGGSDKRTAG
EFFSDTILAGANITAVSLSRIKNDDGFSTDGVTGVYAAKVVDDRNLIYEG
YIAITLRSHFDANVEWSMYGLVRDEGPFVYRVAMRLYKRGATVAAYPCFD
EAPSLKYIGNWSFNGTDYKCPDGVTRPMRRNPEEELQTIALKIFPVSNQV
STQRNGDLLAWITETDFARFAAAETFALEMRTRVRSDRMFYSQKEGENLI
VARGEFEEQITIGVWETVVLLVGIGTFLVSIGVSCFWKLYQRQKYRMDSD
VVSLDSIARMYCIENTGNNHPGNCLLNIGLSDIQQDAQHLGIVGSGIASV
RRPELALQ*