Gchil1082.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1082.t1
Unique NameGchil1082.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length249
Homology
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BLAST of Gchil1082.t1 vs. uniprot
Match: A0A2V3IL72_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL72_9FLOR)

HSP 1 Score: 79.3 bits (194), Expect = 5.260e-14
Identity = 51/171 (29.82%), Postives = 90/171 (52.63%), Query Frame = 0 
Query:   67 FARTSQAGLTVQRGTSGTLTFAFTVNAIEAETLATLDQEFSSSLSVSEMEEYSRLRSEYQSGFGIPFLRWLGINLNNRRVTRDEMERSFELRENYNTQSSIA-QQVLSNVQQQQLQISGELTAFGTSFIPTTVFAFIRIARLQTQDGMTLTVVSQSGDNLVAADAGGNTVP 236
            F    QA L V+ G   + +F + ++ + +  LA  D  F+S+++  E   Y   +  Y  G  IPFLR LGI+LN        ++ +   R++Y    +IA +Q++ + +  +L+I+G ++  G S  P+T   F++ +R+   D   L VVS + D++VA D   N +P
Sbjct:   63 FGPIGQATLNVRLGLRASFSFNYRIDGVTSAYLAASDHIFTSTMNSRERILYEEAKRGYNGGLDIPFLRQLGIHLNESH----SLDANLVSRDDYYALKAIAARQIMQSFRGGKLRINGTISVIGVSEQPSTARVFVKFSRVTLVDNTVLHVVSSNNDDVVAGDDSHNMLP 229
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BLAST of Gchil1082.t1 vs. uniprot
Match: R7Q4Y7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y7_CHOCR)

HSP 1 Score: 67.8 bits (164), Expect = 6.720e-11
Identity = 35/100 (35.00%), Postives = 60/100 (60.00%), Query Frame = 0 
Query:  146 VTRDEMERSFELRENYNTQSSIAQQVLSNVQQQQLQISGELTAFGTSFIPTTVFAFIRIARLQTQDGMTLTVVSQSGDNLVAADAGGNTVPSSGGDIDIV 245
            ++++E+    E  E +  +      +L  V   +++I+G LTA G S IPT  FAF+R+AR++ +DG T  VVS   ++++AAD  G+ V +S  + DI+
Sbjct:   13 LSKEELVEKRESSEEFRKREQALTSILETVADTRIRINGTLTATGVSQIPTVAFAFVRLARIEFEDGSTQLVVSNKNEDIIAADEDGDAVGTSDQESDIL 112
The following BLAST results are available for this feature:
BLAST of Gchil1082.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IL72_9FLOR5.260e-1429.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4Y7_CHOCR6.720e-1135.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..248
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000172_piloncontigtig00000172_pilon:969312..970058 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1082.t1Gchil1082.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000172_pilon 969312..970058 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1082.t1 ID=Gchil1082.t1|Name=Gchil1082.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=249bp
MISIKLIVAVFSMALYTLALSTAVLPRPDAVIDLPVVDIQESTLVIPLVR
QQQEEAVFAVNSSNTGFARTSQAGLTVQRGTSGTLTFAFTVNAIEAETLA
TLDQEFSSSLSVSEMEEYSRLRSEYQSGFGIPFLRWLGINLNNRRVTRDE
MERSFELRENYNTQSSIAQQVLSNVQQQQLQISGELTAFGTSFIPTTVFA
FIRIARLQTQDGMTLTVVSQSGDNLVAADAGGNTVPSSGGDIDIVPLF*
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