Gchil10580.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10580.t1
Unique NameGchil10580.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length360
Homology
BLAST of Gchil10580.t1 vs. uniprot
Match: A0A2V3IMQ5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMQ5_9FLOR)

HSP 1 Score: 269 bits (688), Expect = 6.610e-85
Identity = 162/357 (45.38%), Postives = 217/357 (60.78%), Query Frame = 0
Query:    1 MAGIKHATKKKFARSTTRKKTIHSGISSEYTTLRGQLTSISSSVKTLMKGFNTARESWLAVAKEEKSFTETLAAAFPDDGPVKSHVKEVESAVHQMQQKMLANEGPDTPHSKIVAVLEGYLKLIDDLETDCADXXXXXXXXXXXXXXXXXXXXXXXXRQKQLQRNLEXXSVARXXXXXXXXXXXXXXXXXXXKHQVVFQCAHHAYWIAQDRYFTTVEKITQSVRWESVSVQERITDIDIHATEKLEPLLRAVALLPPVTASDITTPPAIQPPSPTKHQDEVIPSPEKEKETKEEKDEDGERKTGKVGADDSKAEAETSKRASSKAGESKDKAKKLPETPLSTPRKAVESEPVTPEVK 357
            MAGIKHATKKKFA+STTRKKTI SGIS+E+T LR QL+S+ ++VK+L+    TAR+SWLA++KE+ +F ET+ AA   +G V+SH KEV++A+HQ+QQK+LA EG ++PH K+ AVL+GYLK + D+E D +                         RQ QLQRNLE  +VAR                   KH+VV QCAHHA+WIAQ  YFT V+++T+ VRWESVSVQER+ D+DI+   KL  + RA+A++PPVTAS++ +  A   PS    +   I +    K   E K E+ ++K G           +T                ++  TP  TP+KA ESEPVTPEVK
Sbjct:    1 MAGIKHATKKKFAKSTTRKKTIQSGISAEFTNLRKQLSSVGTAVKSLIANIGTARDSWLAISKEQTNFAETIYAAVSTEGEVRSHAKEVQAALHQLQQKLLATEGANSPHRKVTAVLDGYLKNVQDVEADGSHVQDSYSEVLRYQKKVDRLQKKPGKRQSQLQRNLEKLTVARNAYQAKLDENVARMKEVFEKHEVVLQCAHHAFWIAQQGYFTAVDEVTREVRWESVSVQERVMDVDINRNAKLALIPRALAIMPPVTASEVGSSVAGSSPSAKVPR---ITAASSVKSVGEGKKEESDKKDG----------VDT----------------EVATTPQCTPKKAPESEPVTPEVK 328          
BLAST of Gchil10580.t1 vs. uniprot
Match: R7QL81_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL81_CHOCR)

HSP 1 Score: 189 bits (479), Expect = 1.460e-52
Identity = 101/267 (37.83%), Postives = 152/267 (56.93%), Query Frame = 0
Query:    1 MAGIKHATKKKFARSTTRKKTIHSGISSEYTTLRGQLTSISSSVKTLMKGFNTARESWLAVAKEEKSFTETLAAAFPDDGPVKSHVKEVESAVHQMQQKMLANEGPDTPHSKIVAVLEGYLKLIDDLETDCADXXXXXXXXXXXXXXXXXXXXXXXXRQKQLQRNLEXXSVARXXXXXXXXXXXXXXXXXXXKHQVVFQCAHHAYWIAQDRYFTTVEKITQSVRWESVSVQERITDIDIHATEKLEPLLRAVALLPPVTASDITTPP 267
            M GIKHATKK FA++ TR +TI SGI++EYT  R +L +  +++K+L+K      + W A+AK + SF   L AA  +DG V+SH +EVE  V Q+Q+ +L ++G  TPH ++ AVLE YLK ++ ++   A                         R+  L RN+   + AR                   KH+ VFQCAHHA+W+AQ++Y   +   T+S+RWES++V+E + +ID++ + KL PL R   L+PP  A++I T P
Sbjct:    1 MPGIKHATKKHFAKAKTRSRTIKSGINAEYTDYRSKLEATQTAIKSLIKKIQATPQVWSAIAKHQSSFASALHAAIANDGVVRSHAREVEGTVRQLQRLILEDDGAATPHRRVTAVLEAYLKSVETVQEGYAQVEMSYTEVLRYEKKVDKLNKKQKKREI-LDRNVSKLAAARVEHDNKLAAIMERMKTTYNKHEAVFQCAHHAFWLAQEKYSAVINDTTKSIRWESMAVREHLVNIDVNNSPKLPPLPRVQMLMPPTEATEIFTAP 266          
The following BLAST results are available for this feature:
BLAST of Gchil10580.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMQ5_9FLOR6.610e-8545.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QL81_CHOCR1.460e-5237.83Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 134..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..359
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60Arfaptin homology (AH) domain/BAR domaincoord: 19..227
e-value: 3.0E-47
score: 162.8
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 27..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000159_piloncontigtig00000159_pilon:766298..767377 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10580.t1Gchil10580.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000159_pilon 766298..767377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10580.t1 ID=Gchil10580.t1|Name=Gchil10580.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=360bp
MAGIKHATKKKFARSTTRKKTIHSGISSEYTTLRGQLTSISSSVKTLMKG
FNTARESWLAVAKEEKSFTETLAAAFPDDGPVKSHVKEVESAVHQMQQKM
LANEGPDTPHSKIVAVLEGYLKLIDDLETDCADVETSYTEVSRYQKKVDK
LQKKPGKRQKQLQRNLEKLSVARGAHQTKLDDIVKRLKTAQEKHQVVFQC
AHHAYWIAQDRYFTTVEKITQSVRWESVSVQERITDIDIHATEKLEPLLR
AVALLPPVTASDITTPPAIQPPSPTKHQDEVIPSPEKEKETKEEKDEDGE
RKTGKVGADDSKAEAETSKRASSKAGESKDKAKKLPETPLSTPRKAVESE
PVTPEVKAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf