Gchil10561.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10561.t1
Unique NameGchil10561.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length68
Homology
BLAST of Gchil10561.t1 vs. uniprot
Match: A0A2V3IWQ6_9FLOR (Protein transport protein Sec61 subunit gamma n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWQ6_9FLOR)

HSP 1 Score: 129 bits (323), Expect = 7.480e-38
Identity = 63/67 (94.03%), Postives = 66/67 (98.51%), Query Frame = 0
Query:    1 MDAARSVSEPLHGFMIDSVRLVRRCNKPDRKEFLKISQATLIGFAVMGFIGFFVRLIHIPINSILLG 67
            MDAARSVSEPLH FMIDSVRLVRRCNKPDRKE++KISQATLIGFAVMGFIGFFVRL+HIPINSILLG
Sbjct:    1 MDAARSVSEPLHAFMIDSVRLVRRCNKPDRKEYIKISQATLIGFAVMGFIGFFVRLVHIPINSILLG 67          
BLAST of Gchil10561.t1 vs. uniprot
Match: R7QAF6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAF6_CHOCR)

HSP 1 Score: 127 bits (319), Expect = 6.240e-37
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0
Query:    1 MDAARSVSEPLHGFMIDSVRLVRRCNKPDRKEFLKISQATLIGFAVMGFIGFFVRLIHIPINSILLG 67
            MDAA+SVSEPLHGFMIDSVRLVRRCNKPDRKEF+KIS AT IGFAVMGFIGFFVRLIHIP+NSILLG
Sbjct:    1 MDAAKSVSEPLHGFMIDSVRLVRRCNKPDRKEFIKISSATAIGFAVMGFIGFFVRLIHIPVNSILLG 67          
BLAST of Gchil10561.t1 vs. uniprot
Match: A0A1X6NKW4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKW4_PORUM)

HSP 1 Score: 103 bits (257), Expect = 9.100e-28
Identity = 48/67 (71.64%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    1 MDAARSVSEPLHGFMIDSVRLVRRCNKPDRKEFLKISQATLIGFAVMGFIGFFVRLIHIPINSILLG 67
            MDA +SV+ PLH F IDS RL+RRC KPDR+EF KI+ AT IGFAVMGFIG+FVRL+HIP+N+IL+G
Sbjct:    1 MDAIQSVAGPLHEFSIDSARLLRRCTKPDRREFTKIASATAIGFAVMGFIGYFVRLLHIPVNNILIG 67          
BLAST of Gchil10561.t1 vs. uniprot
Match: M2Y4C1_GALSU (Protein transport protein SEC61 subunit gamma n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4C1_GALSU)

HSP 1 Score: 97.1 bits (240), Expect = 3.480e-25
Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 0
Query:    1 MDAARSVSEPLHGFMIDSVRLVRRCNKPDRKEFLKISQATLIGFAVMGFIGFFVRLIHIPINSILLG 67
            MD  + +  P   FM+DS RLVRRC KPDR+EFLKI+ AT +GF VMGFIGFFVRLIHIP+N+ILL 
Sbjct:    1 MDGFQEIVSPFSSFMVDSYRLVRRCTKPDRREFLKIAGATAVGFLVMGFIGFFVRLIHIPVNNILLS 67          
BLAST of Gchil10561.t1 vs. uniprot
Match: A0A814DJE1_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814DJE1_ADIRI)

HSP 1 Score: 95.5 bits (236), Expect = 3.240e-24
Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    1 MDAARSVSEPLHGFMIDSVRLVRRCNKPDRKEFLKISQATLIGFAVMGFIGFFVRLIHIPINSILLG 67
            MD  +  +EP   FM DS+RLV++C KPDRKEF KI+ AT IGFA+MGFIGFFV+LIHIPIN+I++G
Sbjct:   30 MDQIQQFTEPCKQFMKDSIRLVKKCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVG 96          
BLAST of Gchil10561.t1 vs. uniprot
Match: A0A0V1BJK1_TRISP (Protein transport protein Sec61 subunit gamma n=3 Tax=Trichinella spiralis TaxID=6334 RepID=A0A0V1BJK1_TRISP)

HSP 1 Score: 95.9 bits (237), Expect = 3.280e-24
Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    1 MDAARSVSEPLHGFMIDSVRLVRRCNKPDRKEFLKISQATLIGFAVMGFIGFFVRLIHIPINSILLG 67
            MD   +V EP   FM DS+RLV+RC KPDRKE+ KI+ AT +GFA+MGFIGFFV+LIHIPIN+I++G
Sbjct:   43 MDQVLAVVEPARQFMKDSIRLVKRCTKPDRKEYQKIAMATAVGFAIMGFIGFFVKLIHIPINNIIVG 109          
BLAST of Gchil10561.t1 vs. uniprot
Match: A0A834R5Z2_SARSC (Protein transport protein Sec61 subunit gamma n=2 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A834R5Z2_SARSC)

HSP 1 Score: 94.4 bits (233), Expect = 4.170e-24
Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 0
Query:    1 MDAARSVSEPLHGFMIDSVRLVRRCNKPDRKEFLKISQATLIGFAVMGFIGFFVRLIHIPINSILLG 67
            MD   S  EP   F  DS+RLVRRC KPDRKEF KI+ AT IGFA+MGFIGFFV+LIHIPIN+I++G
Sbjct:    1 MDQIISFVEPAKKFTKDSIRLVRRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVG 67          
BLAST of Gchil10561.t1 vs. uniprot
Match: A0A1D1VR89_RAMVA (Uncharacterized protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VR89_RAMVA)

HSP 1 Score: 94.4 bits (233), Expect = 4.170e-24
Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 MDAARSVSEPLHGFMIDSVRLVRRCNKPDRKEFLKISQATLIGFAVMGFIGFFVRLIHIPINSILLG 67
            MD      EPL+ F  DS+RLV+RC KPDRKE+ KI+ AT IGFA+MGFIGFFV+LIHIPIN+I++G
Sbjct:    1 MDQVNEYIEPLYQFSKDSIRLVKRCTKPDRKEYQKIAVATAIGFAIMGFIGFFVKLIHIPINNIIVG 67          
BLAST of Gchil10561.t1 vs. uniprot
Match: D3PGE0_LEPSM (Protein transport protein Sec61 subunit gamma n=4 Tax=Pancrustacea TaxID=197562 RepID=D3PGE0_LEPSM)

HSP 1 Score: 94.0 bits (232), Expect = 5.930e-24
Identity = 46/67 (68.66%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 MDAARSVSEPLHGFMIDSVRLVRRCNKPDRKEFLKISQATLIGFAVMGFIGFFVRLIHIPINSILLG 67
            MD     +EPL  F  DSVRLV+RC KPDRKEF KI+ AT IGFA+MGFIGFFV+LIHIPIN+I++G
Sbjct:    1 MDQIVQFAEPLKQFSKDSVRLVKRCTKPDRKEFQKIAIATAIGFAIMGFIGFFVKLIHIPINNIIVG 67          
BLAST of Gchil10561.t1 vs. uniprot
Match: A0A8J5KD89_HOMAM (Transport protein Sec61 subunit gamma-like n=1 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5KD89_HOMAM)

HSP 1 Score: 94.0 bits (232), Expect = 5.930e-24
Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 0
Query:    1 MDAARSVSEPLHGFMIDSVRLVRRCNKPDRKEFLKISQATLIGFAVMGFIGFFVRLIHIPINSILLG 67
            MD    + EP   F  DS+RLV+RC KPDRKEF KIS AT IGFA+MGFIGFFV+LIHIPIN+I++G
Sbjct:    1 MDQVMMLVEPARQFSKDSMRLVKRCTKPDRKEFQKISMATAIGFAIMGFIGFFVKLIHIPINNIIVG 67          
The following BLAST results are available for this feature:
BLAST of Gchil10561.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWQ6_9FLOR7.480e-3894.03Protein transport protein Sec61 subunit gamma n=1 ... [more]
R7QAF6_CHOCR6.240e-3792.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NKW4_PORUM9.100e-2871.64Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2Y4C1_GALSU3.480e-2567.16Protein transport protein SEC61 subunit gamma n=1 ... [more]
A0A814DJE1_ADIRI3.240e-2465.67Hypothetical protein n=2 Tax=Adineta ricciae TaxID... [more]
A0A0V1BJK1_TRISP3.280e-2465.67Protein transport protein Sec61 subunit gamma n=3 ... [more]
A0A834R5Z2_SARSC4.170e-2468.66Protein transport protein Sec61 subunit gamma n=2 ... [more]
A0A1D1VR89_RAMVA4.170e-2465.67Uncharacterized protein n=1 Tax=Ramazzottius varie... [more]
D3PGE0_LEPSM5.930e-2468.66Protein transport protein Sec61 subunit gamma n=4 ... [more]
A0A8J5KD89_HOMAM5.930e-2467.16Transport protein Sec61 subunit gamma-like n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 14..65
e-value: 5.3E-13
score: 48.7
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPROSITEPS01067SECE_SEC61Gcoord: 14..42
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitHAMAPMF_00422SecEcoord: 9..64
score: 12.675982
IPR023391Protein translocase SecE domain superfamilyGENE3D1.20.5.820Preprotein translocase SecE subunitcoord: 8..67
e-value: 5.2E-29
score: 101.7
IPR023391Protein translocase SecE domain superfamilySUPERFAMILY103456Preprotein translocase SecE subunitcoord: 9..64
IPR008158Protein translocase SEC61 complex, gamma subunitTIGRFAMTIGR00327TIGR00327coord: 11..65
e-value: 2.9E-16
score: 57.0
NoneNo IPR availablePANTHERPTHR12309:SF5PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMAcoord: 1..67
NoneNo IPR availablePANTHERPTHR12309SEC61 GAMMA SUBUNITcoord: 1..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 39..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000159_piloncontigtig00000159_pilon:711753..712118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10561.t1Gchil10561.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000159_pilon 711753..712118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10561.t1 ID=Gchil10561.t1|Name=Gchil10561.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=68bp
MDAARSVSEPLHGFMIDSVRLVRRCNKPDRKEFLKISQATLIGFAVMGFI
GFFVRLIHIPINSILLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001901Translocase_SecE/Sec61-g
IPR023391Prot_translocase_SecE_dom_sf
IPR008158Translocase_Sec61-g