Gchil10022.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10022.t1
Unique NameGchil10022.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length406
Homology
BLAST of Gchil10022.t1 vs. uniprot
Match: R7QJ93_CHOCR (Integrase catalytic domain-containing protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ93_CHOCR)

HSP 1 Score: 293 bits (751), Expect = 6.760e-90
Identity = 169/388 (43.56%), Postives = 223/388 (57.47%), Query Frame = 0
Query:    9 EETNVMPVTREKILREQAQDAYCRTLADQIGFKGSPFDVDHNGYIVRRSTFYGSLQKVVPKALRPRVLYLAHYPRLSGHPGATRMYYTLTQQFYWPHMAHDVYTFVAHSSDH--------RRVVEAHEGDTCKGDDVNNAD-DRFLQQLGLPVWCTT-------------------------------TNGQVERLNHTLVSRLRHYTEEHQTGWDKLVQPLTYSYKHQVHRSTQATPFDLVLLRHPPGIVVQG---DHTTSTAAGALTPAQVKRNTLVMLRRALKHAESRLTAAQKRYKADYDRRVTNVVSVSSGQYVYIDNPPSGRRPRPGDEADD-EAIDSDINSKLLPKSVGPHKVLNASDPTVTVDQDGIPNTISIDRITVAP 352
            EE +V  VT E+ LREQA+D +C   A+ +G   S +DV+  G++VR+S   G+LQ+VVPK LR ++LYLAH+PRL+GHPG TRMYYTL +++YWPHMA+D ++  AH + H         ++  +    T     V NA  D ++   G P +  T                               TNGQ ER N TLV RLRHY  EHQ  WD+ +QPLT++Y  QVHRST+ TPFDLVL R P G+ + G       S      TP Q KR TL  LR AL+    +LTAAQ+RYKAD+D++V     +  G  VY+D PP   RP    E  D  + D   + KLLPK+ GP +V +A++ TV VDQDG+ N +SIDRIT  P
Sbjct:  237 EERDVSSVTVEEFLREQAEDPFCTAAAETVGNPDSRYDVERYGFVVRKSPLDGTLQRVVPKRLRAKILYLAHHPRLAGHPGGTRMYYTLRREYYWPHMANDAFSTTAHGNRHVLVMTDRFTKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYMLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQTNGQTERFNRTLVQRLRHYVAEHQRDWDEYIQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLALPGTVPQDAVSNTEDPRTPVQYKRATLRKLRDALERTRVKLTAAQRRYKADFDKKVRFRSVIQVGDLVYVDRPP---RPLTSTERGDLPSNDGGPSVKLLPKTEGPFRVRSATETTVVVDQDGVSNRVSIDRITRMP 621          
BLAST of Gchil10022.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR)

HSP 1 Score: 276 bits (705), Expect = 3.110e-81
Identity = 177/440 (40.23%), Postives = 225/440 (51.14%), Query Frame = 0
Query:    6 LTLEETNVMPVTREKILREQAQDAYCRTLADQIGFKGSPFDVDHNGYIVRRSTFYGSLQKVVPKALRPRVLYLAHYPRLSGHPGATRMYYTLTQQFYWPHMAHDVYTFV-------------------------------------------AHSSDHRRVVEAHEGD--------TCKGDDVNNAD---------------------------DRFLQQLGLPVWCTT-----TNGQVERLNHTLVSRLRHYTEEHQTGWDKLVQPLTYSYKHQVHRSTQATPFDLVLLRHPPGIVVQGDHTTSTAAGA-----LTPAQVKRNTLVMLRRALKHAESRLTAAQKRYKADYDRRVTNVVSVSSGQYVYIDNPPSG-----RRPRPGDEADDEAIDSDINSKLLPKSVGPHKVLNASDPTVTVDQDGIPNTISIDRITVAP 352
            +T EE +V  ++    LREQA DA+CR  AD +G   S FDVD  G++VR+S   G+LQ+VVP  LRPRVLYLAH+PRL+GHPG TRMYYTL +++YWPH+A D +  V                                           AH + H  V+              T     V +A                            D     LG+  + TT     TNGQ ER N TLV RLRHY EEHQ  WD  VQPLT++Y  QVHRST+ TPFDLVL R P G+++ G  T    AG       TP Q KR TL  LR AL  A ++LTA+QK+YK + DR+V     V +G +VY+D PP       RR R     D E    D++ KLLPK+ GP  V +A+D TV ++QD + N +SIDR+T  P
Sbjct:  367 VTPEERDVSSISVANFLREQADDAFCRAAADTVGEPNSKFDVDRYGFLVRKSPLDGTLQRVVPNRLRPRVLYLAHHPRLAGHPGGTRMYYTLRREYYWPHLASDAFATVRNCTSWAATRGTLFKNQKDLRLFPAAGPMEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTHSIPLRTTTASVVASAFLDNWVYVYGAPRYMLTDNGPQFAAKFFDAVCALLGVRPYLTTAYHPQTNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPTGLILPG--TVPQDAGTHMEDPRTPVQYKRATLRKLRDALDRARTKLTASQKQYKDNLDRKVRFRPVVRAGDFVYVDRPPRTLTSVERRMRVQSPTDTE----DLSVKLLPKAEGPFNVRSATDTTVLIEQDSVENRVSIDRVTKMP 800          
BLAST of Gchil10022.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR)

HSP 1 Score: 268 bits (685), Expect = 6.330e-79
Identity = 178/451 (39.47%), Postives = 232/451 (51.44%), Query Frame = 0
Query:   20 KILREQAQDAYCRTLADQIGFKGSPFDVDHNGYIVRRSTFYGSLQKVVPKALRPRVLYLAHYPRLSGHPGATRMYYTLTQQFYWPHMAHDVYTFV-------------------------------------------AHSSDHRRVVEAHEGD--------TCKGDDVNNAD-DRFLQQLGLPVWCTT-------------------------------TNGQVERLNHTLVSRLRHYTEEHQTGWDKLVQPLTYSYKHQVHRSTQATPFDLVLLRHPPGIVVQGDHTTSTAAGA-----LTPAQVKRNTLVMLRRALKHAESRLTAAQKRYKADYDRRVTNVVSVSSGQYVYIDNPPSG-----RRPRP-GDEADDEAIDSDINSKLLPKSVGPHKVLNASDPTVTVDQDGIPNTISIDRITVAP----ETVQHRMEAGTSARE--PRA 370
            + LREQA+DA+CR  A+ +G   S FD+D  G++VR S   G+LQ+VVP  LRPRVLYLAH+PRL+GH GATRMYYTL +++YWPHMA D  + V                                           AH + H  V+              T     V NA  D ++   G P +  T                               +NGQ ER N TLV RLRHY EEHQ  WD  VQPLT++Y  QVHRST+ TPFDLVL R P G+++ G  T    AG       TP Q KR TL  LR AL  A ++L+A+QKRYK D+D++V     V +G +VY+D PP       RR R  G    DE     ++ KLLPK+ GP +V +A+D TV ++QDG+ N +SIDR+T  P    +TV   + + + A+   PRA
Sbjct:  285 EFLREQAEDAFCRFAAETVGTPNSKFDIDRYGFLVRTSPLDGTLQRVVPTRLRPRVLYLAHHPRLAGHSGATRMYYTLRREYYWPHMASDALSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLILPG--TVPQDAGTHREDPRTPVQYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRPPRPLTSVERRTRAQGTTGTDE-----LSVKLLPKTEGPFRVRSATDTTVLIEQDGVENRVSIDRVTKMPRGPGDTVASAIPSASDAQTTTPRA 728          
BLAST of Gchil10022.t1 vs. uniprot
Match: R7Q4X3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4X3_CHOCR)

HSP 1 Score: 211 bits (538), Expect = 3.070e-60
Identity = 146/395 (36.96%), Postives = 191/395 (48.35%), Query Frame = 0
Query:   65 KVVPKALRPRVLYLAHYPRLSGHPGATRMYYTLTQQFYWPHMAHDVYTFV-------------------------------------------AHSSDHRRVVEAHEGD--------TCKGDDVNNAD-DRFLQQLGLPVWCTT-------------------------------TNGQVERLNHTLVSRLRHYTEEHQTGWDKLVQPLTYSYKHQVHRSTQATPFDLVLLRHPPGIVVQGDHTTSTAAGALTPAQVKRNTLVMLRRALKHAESRLTAAQKRYKADYDRRVTNVVSVSSGQYVYIDNPPSGRRPRPGDEADDEAIDSDINSKLLPKSVGPHKVLNASDPTVTVDQDGIPNTISIDRITVAP----ETVQHRMEAGTSARE--PRA 370
            +VVP  LRPRVLYLAH+PRL+GHPGATRMYYTL +++YWPHMA D ++ V                                           AH + H  V+              T     V NA  D ++   G P +  T                               +NGQ ER N TLV RLRHY EEHQ  WD  +QPLT++Y  QVHRST+ TPFDLVL R P G+++  D  T        P Q KR TL  LR AL  A ++L+A+QKRYK D+D++V     V +G +VY+D PP   RP    E    A +            GP +V +A+D TV ++QDG+ N +SIDR+T  P    +TV   + + + A+   PRA
Sbjct:   42 RVVPTRLRPRVLYLAHHPRLAGHPGATRMYYTLRREYYWPHMASDAFSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLQFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYLQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLILPEDPRT--------PVQYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRPP---RPLTSVERRTRAQE------------GPFRVRSATDTTVLIEQDGVENRVSIDRVTKMPRGPGDTVASAIPSASDAQTTTPRA 413          
BLAST of Gchil10022.t1 vs. uniprot
Match: R7Q7I0_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7I0_CHOCR)

HSP 1 Score: 199 bits (506), Expect = 8.960e-56
Identity = 105/217 (48.39%), Postives = 134/217 (61.75%), Query Frame = 0
Query:   10 ETNVMPVTREKILREQAQDAYCRTLADQIGFKGSPFDVDHNGYIVRRSTFYGSLQKVVPKALRPRVLYLAHYPRLSGHPGATRMYYTLTQQFYWPHMAHDVY-TFVAHSSDHRRVVEAHEGDTCKGDDVNNADDRFLQQLGLPVWCTT-----TNGQVERLNHTLVSRLRHYTEEHQTGWDKLVQPLTYSYKHQVHRSTQATPFDLVLLRHPPGIVV 220
            E +   ++ E+ +REQA+DA+CR  A+ +    S FD+D  G++VR S   G+LQ VVP  LRPRVLYLAH+PRL+GHPGATRMY+TL +++YWPHMA D + TF A                          D     LG+  + TT     +NGQ ER N TLV RLRHY EEHQ  WD  VQPLT++Y  QVHRST+ TPFDLVL   P G+++
Sbjct:  217 ERDAASISVEEFIREQAEDAFCRFAAETVETPNSKFDIDRYGFLVRTSPLDGTLQCVVPTRLRPRVLYLAHHPRLAGHPGATRMYHTLCREYYWPHMASDAFSTFAA-----------------------KFFDAVCALLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTHPPSGLIL 410          
BLAST of Gchil10022.t1 vs. uniprot
Match: R7QU67_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QU67_CHOCR)

HSP 1 Score: 185 bits (469), Expect = 3.690e-51
Identity = 112/249 (44.98%), Postives = 141/249 (56.63%), Query Frame = 0
Query:  142 DRFLQQLGLPVWCTT-----TNGQVERLNHTLVSRLRHYTEEHQTGWDKLVQPLTYSYKHQVHRSTQATPFDLVLLRHPPGIVVQGDHTTSTAAGAL-----TPAQVKRNTLVMLRRALKHAESRLTAAQKRYKADYDRRVTNVVSVSSGQYVYIDNPPSGRRPRPGDEADDEAIDSD-INSKLLPKSVGPHKVLNASDPTVTVDQDGIPNTISIDRITVAPETVQHRMEAGTSAREPRALALRTRPSE 379
            D     LG+  + TT     TNGQ ER N T+V RLRHY EEHQ  WD+ +QPL Y+Y  QVHRST+ TPFDLVL R P G+ V G  T   AAG       TP Q KR TL  LR  L  A  ++TAAQKRYK ++D++V     +  G  VY+D PP   R       D + + +D ++ KLLPK+ GP +V  A+D TVTV+QD +P  +SIDR+T                R PR L  RT P+E
Sbjct:   87 DAVCALLGIHHYLTTAYHPQTNGQTERFNKTIVQRLRHYVEEHQRDWDEFLQPLAYAYNIQVHRSTETTPFDLVLTRQPSGLTVAG--TAPQAAGVAHDDPRTPVQYKRATLRKLRDVLDRARVKMTAAQKRYKENFDKKVRFRPVIQEGDQVYVDRPPPALRAAERRGRDGQGLGTDDMSVKLLPKTEGPFRVRKATDTTVTVEQDRLPVPVSIDRVT----------------RMPRGLGDRTMPTE 317          
BLAST of Gchil10022.t1 vs. uniprot
Match: R7QMC5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMC5_CHOCR)

HSP 1 Score: 189 bits (479), Expect = 1.740e-49
Identity = 122/323 (37.77%), Postives = 154/323 (47.68%), Query Frame = 0
Query:    6 LTLEETNVMPVTREKILREQAQDAYCRTLADQIGFKGSPFDVDHNGYIVRRSTFYGSLQKVVPKALRPRVLYLAHYPRLSGHPGATRMYYTLTQQFYWPHMAHDVYTFV-------------------------------------------AHSSDHRRVVEAHEGD--------TCKGDDVNNAD-DRFLQQLGLPVWCTTTNG-------------------------------QVERLNHTLVSRLRHYTEEHQTGWDKLVQPLTYSYKHQVHRSTQATPFDLVLLRHPPGIVVQGDHTTSTAAGA-----LTPAQVKR 240
            L ++  +  PV  E+ LREQA+DA+CR  A+ +G   S FD+D  G++VR S   G+LQ+VVP  LRPRVLYL H+PRL+GHPGATRMYYTL +++YWPHMA D ++ V                                           AH + H  V+              T     V NA  D ++   G P +  T NG                               Q ER N TLV RLRH  E+HQ  WD  VQPLT++Y  QVHRST+ TPFDLVL R P G+++ G  T    AG       TP Q KR
Sbjct:  468 LRIDGGDTEPVDDEEFLREQAEDAFCRFAAETVGTPNSKFDIDRYGFLVRTSPLGGTLQRVVPTRLRPRVLYLTHHPRLAGHPGATRMYYTLRREYYWPHMASDAFSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQSKGQTERFNRTLVQRLRHLVEDHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPCGLILPG--TVPQDAGTHPEDPRTPVQYKR 788          
BLAST of Gchil10022.t1 vs. uniprot
Match: R7Q2U6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2U6_CHOCR)

HSP 1 Score: 165 bits (417), Expect = 6.240e-43
Identity = 90/201 (44.78%), Postives = 124/201 (61.69%), Query Frame = 0
Query:  157 TNGQVERLNHTLVSRLRHYTEEHQTGWDKLVQPLTYSYKHQVHRSTQATPFDLVLLRHPPGIVVQGDHTTSTAAGALTP--AQVKRNTLVMLRRALKHAESRLTAAQKRYKADYDRRVTNVVSVSSGQYVYIDNPPSGRRPRPGDEADDEAIDSDINSKLLPKSVGPHKVLNA--SDPTVTVDQDGIPNTISIDRITVAPE 353
            TNGQ ER N TL +RLRHY  EHQ  WD  VQPLTY+Y  QVH+ST  TPFDLVL RHPPGI VQ   +   +     P  AQ+KR TL  +R+ L  A ++LT AQ +YK ++D+ V  + S   GQ V++D PP        D +     + D + KLLPK+ GP++ + A     TVT++++G+ + +SI+R+T  P+
Sbjct:  135 TNGQAERFNRTLATRLRHYVSEHQRDWDDYVQPLTYAYNMQVHKSTGTTPFDLVLTRHPPGISVQAPSSAIPSPNGSEPTSAQMKRITLQRVRKILSRAGTKLTHAQAQYKRNFDKAVRTLPSFEVGQEVFLDRPP--------DFSATPLENEDGHRKLLPKTTGPYRFIKAPVDGDTVTIERNGLLDAVSINRVTKVPQ 327          
BLAST of Gchil10022.t1 vs. uniprot
Match: R7QR94_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR94_CHOCR)

HSP 1 Score: 164 bits (416), Expect = 6.120e-41
Identity = 89/201 (44.28%), Postives = 124/201 (61.69%), Query Frame = 0
Query:  157 TNGQVERLNHTLVSRLRHYTEEHQTGWDKLVQPLTYSYKHQVHRSTQATPFDLVLLRHPPGIVVQGDHTTSTAAGALTP--AQVKRNTLVMLRRALKHAESRLTAAQKRYKADYDRRVTNVVSVSSGQYVYIDNPPSGRRPRPGDEADDEAIDSDINSKLLPKSVGPHKVLNA--SDPTVTVDQDGIPNTISIDRITVAPE 353
            TNGQ ER N TL +RLRHY  EHQ  WD  VQPLTY+Y  QVH+ST  TPFDL+L RHPPGI VQ   +   +     P  AQ+K  TL  +R+ L  A ++LT AQ +YK ++D+ V  + S   GQ V++D PP        D +     + D + KLLPK+ GP++V+ A     TVT++++G+ + +SI+R+T  P+
Sbjct:  519 TNGQAERFNRTLATRLRHYVSEHQRDWDDYVQPLTYAYNMQVHKSTSTTPFDLILTRHPPGISVQAPSSAIPSPNGSEPTSAQMKPITLQRVRKILSRAGTKLTHAQAQYKRNFDKAVRTLPSFEVGQEVFLDRPP--------DFSATPLENEDGHRKLLPKTTGPYRVIKAPVGGDTVTIERNGLLDAVSINRVTKVPQ 711          
BLAST of Gchil10022.t1 vs. uniprot
Match: R7Q5S0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5S0_CHOCR)

HSP 1 Score: 125 bits (313), Expect = 2.210e-27
Identity = 75/200 (37.50%), Postives = 105/200 (52.50%), Query Frame = 0
Query:  157 TNGQVERLNHTLVSRLRHYTEEHQTGWDKLVQPLTYSYKHQVHRSTQATPFDLVLLRHPPGIVVQGDHTTSTAAGALTPAQ---VKRNTLVMLRRALKHAESRLTAAQKRYKADYDRRVTNVVS-VSSGQYVYIDNPPSGRRPRPGDEADDEAIDSDINSKLLPKSVGPHKVLNASDPTVTVDQDGIPNTISIDRITVAP 352
            TNGQVER N T+ + LR+Y  EHQ  WD  V PLTY+Y   VHR+T  TPF+LVL R PP      + +     G + PA     +   L  L   ++ A   L   Q RYK D+D+R+  + S +  G+YVY+ NP  G +                ++KL   +VGP++VL     T+T+D+DG+   +S DR   AP
Sbjct:  516 TNGQVERYNRTIAAMLRNYVGEHQDDWDMYVGPLTYAYNSHVHRTTNTTPFELVLSRPPP------EFSLRRIDGDVAPADRGNQRAEFLKTLNSTIQRAYGSLRRTQARYKRDFDKRIRRINSRLHPGEYVYL-NPTDGGK---------------TSNKLASPAVGPYRVLANDHRTITIDRDGVTERVSADRCVYAP 693          
The following BLAST results are available for this feature:
BLAST of Gchil10022.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QJ93_CHOCR6.760e-9043.56Integrase catalytic domain-containing protein n=3 ... [more]
R7QLF2_CHOCR3.110e-8140.23Integrase catalytic domain-containing protein n=1 ... [more]
R7QN04_CHOCR6.330e-7939.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q4X3_CHOCR3.070e-6036.96Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q7I0_CHOCR8.960e-5648.39Integrase catalytic domain-containing protein n=1 ... [more]
R7QU67_CHOCR3.690e-5144.98Integrase catalytic domain-containing protein n=1 ... [more]
R7QMC5_CHOCR1.740e-4937.77Integrase catalytic domain-containing protein n=1 ... [more]
R7Q2U6_CHOCR6.240e-4344.78Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QR94_CHOCR6.120e-4144.28Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q5S0_CHOCR2.210e-2737.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 243..263
NoneNo IPR availableGENE3D1.10.340.70coord: 43..120
e-value: 7.8E-13
score: 50.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..315
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 67..115
e-value: 3.9E-12
score: 46.1
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 142..244
e-value: 9.7E-13
score: 49.8
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 142..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:421537..423003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10022.t1Gchil10022.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004442_pilon 421537..423003 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10022.t1 ID=Gchil10022.t1|Name=Gchil10022.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=406bp
MATQILTLEETNVMPVTREKILREQAQDAYCRTLADQIGFKGSPFDVDHN
GYIVRRSTFYGSLQKVVPKALRPRVLYLAHYPRLSGHPGATRMYYTLTQQ
FYWPHMAHDVYTFVAHSSDHRRVVEAHEGDTCKGDDVNNADDRFLQQLGL
PVWCTTTNGQVERLNHTLVSRLRHYTEEHQTGWDKLVQPLTYSYKHQVHR
STQATPFDLVLLRHPPGIVVQGDHTTSTAAGALTPAQVKRNTLVMLRRAL
KHAESRLTAAQKRYKADYDRRVTNVVSVSSGQYVYIDNPPSGRRPRPGDE
ADDEAIDSDINSKLLPKSVGPHKVLNASDPTVTVDQDGIPNTISIDRITV
APETVQHRMEAGTSAREPRALALRTRPSEDPTPIEVNDDRQRDDPDYNPL
TGAEI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041588Integrase_H2C2
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf