Gchil9092.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil9092.t1
Unique NameGchil9092.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length365
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1619582..1620676 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9092Gchil9092Gracilaria chilensis NLEC103_M9 malegenetig00004370_pilon 1619582..1620676 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9092.t1.stop1Gchil9092.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004370_pilon 1619582..1619584 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9092.t1.CDS1Gchil9092.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004370_pilon 1619582..1620676 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9092.t1.exon1Gchil9092.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004370_pilon 1619582..1620676 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9092.t1.start1Gchil9092.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004370_pilon 1620674..1620676 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9092.t1Gchil9092.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004370_pilon 1619582..1620676 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil9092.t1 ID=Gchil9092.t1|Name=Gchil9092.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=365bp
MYTRIFAAVLFGLCLFENVSGADYGSCVCKQGGRGSGTGATAAEACTKAM
KRCPVKNKCLRGYVCKGGAGKPHCRIARKIVNKRINLKRKTVWKMKHGKR
VRRFVVRKIVQFRCNVVCKSDGYGSCVKPGGRGDPHLVGFDGKKFDFHGV
ENKFYALFGRYGGDFVVTKIRSAERLAKNGIEKTYFDEVGLQLNGGKDDV
SVSLVEDDAESGKWKTKVALNGKVLSADEHFGNSHVLFAGEDGAITVRSS
ENEYVLREEQIDNKERRHLDIDVTLLGDPNKQHRYVGILGVTLNRAMGRE
MVEELGYSARDVELETAMRDRFEVESLFPKIEEQDVNLSGVVRIIDVPNQ
KFIGNKSWRASVTT*
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spliced messenger RNA

>Gchil9092.t1 ID=Gchil9092.t1|Name=Gchil9092.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1095bp|location=Sequence derived from alignment at tig00004370_pilon:1619582..1620676- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTATACTCGAATATTTGCAGCTGTGCTCTTTGGCCTGTGTCTCTTCGA
GAATGTCTCCGGCGCCGATTACGGATCATGCGTCTGCAAACAAGGAGGAA
GAGGGTCTGGAACAGGTGCGACGGCTGCTGAAGCGTGCACGAAAGCTATG
AAGAGATGTCCAGTCAAGAACAAGTGCTTGCGAGGTTATGTTTGTAAGGG
CGGGGCTGGAAAGCCACACTGCCGCATTGCTCGGAAAATAGTGAACAAAA
GGATTAACCTTAAGCGCAAGACCGTGTGGAAAATGAAGCACGGCAAACGT
GTTCGTCGATTTGTGGTGCGAAAGATAGTTCAATTCCGATGCAACGTGGT
GTGCAAGTCAGATGGGTACGGATCTTGTGTGAAGCCAGGTGGAAGAGGTG
ATCCTCATCTTGTTGGGTTTGATGGGAAGAAATTTGATTTTCACGGTGTC
GAGAACAAATTCTATGCTTTGTTTGGACGTTATGGGGGTGACTTTGTCGT
GACGAAAATCCGATCGGCCGAACGCTTGGCTAAGAATGGGATTGAGAAGA
CGTACTTCGATGAGGTTGGCTTGCAATTAAATGGTGGAAAGGATGACGTA
TCTGTTTCTCTGGTGGAAGACGATGCAGAGAGTGGGAAATGGAAGACTAA
AGTGGCACTGAACGGAAAGGTTCTTTCGGCTGATGAGCATTTCGGCAACT
CGCATGTGCTCTTTGCCGGAGAGGATGGTGCAATCACCGTGAGAAGCTCT
GAAAACGAATATGTTCTACGTGAAGAGCAGATAGACAACAAAGAGCGACG
CCACCTGGACATCGATGTGACTTTACTTGGAGACCCTAATAAGCAGCATC
GATATGTCGGCATATTGGGTGTGACGCTTAACCGGGCGATGGGACGGGAG
ATGGTTGAAGAACTAGGGTATTCTGCACGGGATGTTGAGCTGGAGACTGC
AATGAGAGATCGCTTTGAGGTTGAGTCGTTATTTCCCAAGATTGAGGAAC
AAGATGTGAATCTTTCTGGAGTCGTAAGGATCATTGATGTGCCGAATCAG
AAATTCATTGGCAACAAGAGCTGGAGGGCGTCGGTAACAACGTAG
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protein sequence of Gchil9092.t1

>Gchil9092.t1 ID=Gchil9092.t1|Name=Gchil9092.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=365bp
MYTRIFAAVLFGLCLFENVSGADYGSCVCKQGGRGSGTGATAAEACTKAM
KRCPVKNKCLRGYVCKGGAGKPHCRIARKIVNKRINLKRKTVWKMKHGKR
VRRFVVRKIVQFRCNVVCKSDGYGSCVKPGGRGDPHLVGFDGKKFDFHGV
ENKFYALFGRYGGDFVVTKIRSAERLAKNGIEKTYFDEVGLQLNGGKDDV
SVSLVEDDAESGKWKTKVALNGKVLSADEHFGNSHVLFAGEDGAITVRSS
ENEYVLREEQIDNKERRHLDIDVTLLGDPNKQHRYVGILGVTLNRAMGRE
MVEELGYSARDVELETAMRDRFEVESLFPKIEEQDVNLSGVVRIIDVPNQ
KFIGNKSWRASVTT*
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mRNA from alignment at tig00004370_pilon:1619582..1620676-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil9092.t1 ID=Gchil9092.t1|Name=Gchil9092.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1095bp|location=Sequence derived from alignment at tig00004370_pilon:1619582..1620676- (Gracilaria chilensis NLEC103_M9 male)
ATGTATACTCGAATATTTGCAGCTGTGCTCTTTGGCCTGTGTCTCTTCGA
GAATGTCTCCGGCGCCGATTACGGATCATGCGTCTGCAAACAAGGAGGAA
GAGGGTCTGGAACAGGTGCGACGGCTGCTGAAGCGTGCACGAAAGCTATG
AAGAGATGTCCAGTCAAGAACAAGTGCTTGCGAGGTTATGTTTGTAAGGG
CGGGGCTGGAAAGCCACACTGCCGCATTGCTCGGAAAATAGTGAACAAAA
GGATTAACCTTAAGCGCAAGACCGTGTGGAAAATGAAGCACGGCAAACGT
GTTCGTCGATTTGTGGTGCGAAAGATAGTTCAATTCCGATGCAACGTGGT
GTGCAAGTCAGATGGGTACGGATCTTGTGTGAAGCCAGGTGGAAGAGGTG
ATCCTCATCTTGTTGGGTTTGATGGGAAGAAATTTGATTTTCACGGTGTC
GAGAACAAATTCTATGCTTTGTTTGGACGTTATGGGGGTGACTTTGTCGT
GACGAAAATCCGATCGGCCGAACGCTTGGCTAAGAATGGGATTGAGAAGA
CGTACTTCGATGAGGTTGGCTTGCAATTAAATGGTGGAAAGGATGACGTA
TCTGTTTCTCTGGTGGAAGACGATGCAGAGAGTGGGAAATGGAAGACTAA
AGTGGCACTGAACGGAAAGGTTCTTTCGGCTGATGAGCATTTCGGCAACT
CGCATGTGCTCTTTGCCGGAGAGGATGGTGCAATCACCGTGAGAAGCTCT
GAAAACGAATATGTTCTACGTGAAGAGCAGATAGACAACAAAGAGCGACG
CCACCTGGACATCGATGTGACTTTACTTGGAGACCCTAATAAGCAGCATC
GATATGTCGGCATATTGGGTGTGACGCTTAACCGGGCGATGGGACGGGAG
ATGGTTGAAGAACTAGGGTATTCTGCACGGGATGTTGAGCTGGAGACTGC
AATGAGAGATCGCTTTGAGGTTGAGTCGTTATTTCCCAAGATTGAGGAAC
AAGATGTGAATCTTTCTGGAGTCGTAAGGATCATTGATGTGCCGAATCAG
AAATTCATTGGCAACAAGAGCTGGAGGGCGTCGGTAACAACGTAG
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Coding sequence (CDS) from alignment at tig00004370_pilon:1619582..1620676-

>Gchil9092.t1 ID=Gchil9092.t1|Name=Gchil9092.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1095bp|location=Sequence derived from alignment at tig00004370_pilon:1619582..1620676- (Gracilaria chilensis NLEC103_M9 male)
ATGTATACTCGAATATTTGCAGCTGTGCTCTTTGGCCTGTGTCTCTTCGA
GAATGTCTCCGGCGCCGATTACGGATCATGCGTCTGCAAACAAGGAGGAA
GAGGGTCTGGAACAGGTGCGACGGCTGCTGAAGCGTGCACGAAAGCTATG
AAGAGATGTCCAGTCAAGAACAAGTGCTTGCGAGGTTATGTTTGTAAGGG
CGGGGCTGGAAAGCCACACTGCCGCATTGCTCGGAAAATAGTGAACAAAA
GGATTAACCTTAAGCGCAAGACCGTGTGGAAAATGAAGCACGGCAAACGT
GTTCGTCGATTTGTGGTGCGAAAGATAGTTCAATTCCGATGCAACGTGGT
GTGCAAGTCAGATGGGTACGGATCTTGTGTGAAGCCAGGTGGAAGAGGTG
ATCCTCATCTTGTTGGGTTTGATGGGAAGAAATTTGATTTTCACGGTGTC
GAGAACAAATTCTATGCTTTGTTTGGACGTTATGGGGGTGACTTTGTCGT
GACGAAAATCCGATCGGCCGAACGCTTGGCTAAGAATGGGATTGAGAAGA
CGTACTTCGATGAGGTTGGCTTGCAATTAAATGGTGGAAAGGATGACGTA
TCTGTTTCTCTGGTGGAAGACGATGCAGAGAGTGGGAAATGGAAGACTAA
AGTGGCACTGAACGGAAAGGTTCTTTCGGCTGATGAGCATTTCGGCAACT
CGCATGTGCTCTTTGCCGGAGAGGATGGTGCAATCACCGTGAGAAGCTCT
GAAAACGAATATGTTCTACGTGAAGAGCAGATAGACAACAAAGAGCGACG
CCACCTGGACATCGATGTGACTTTACTTGGAGACCCTAATAAGCAGCATC
GATATGTCGGCATATTGGGTGTGACGCTTAACCGGGCGATGGGACGGGAG
ATGGTTGAAGAACTAGGGTATTCTGCACGGGATGTTGAGCTGGAGACTGC
AATGAGAGATCGCTTTGAGGTTGAGTCGTTATTTCCCAAGATTGAGGAAC
AAGATGTGAATCTTTCTGGAGTCGTAAGGATCATTGATGTGCCGAATCAG
AAATTCATTGGCAACAAGAGCTGGAGGGCGTCGGTAACAACGTAG
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