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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 5762.XP_002668944.1 |
| Preferred name | STT3B |
| PFAMs | STT3 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00005,RC00482 |
| KEGG ko | ko:K07151,ko:K11593 |
| KEGG Reaction | R04216,R05976 |
| KEGG Pathway | ko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141 |
| KEGG Module | M00072 |
| GOs | GO:0003674,GO:0003824,GO:0004576,GO:0004579,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006516,GO:0006807,GO:0006950,GO:0006970,GO:0006986,GO:0008150,GO:0008152,GO:0008250,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009628,GO:0009651,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0019941,GO:0030163,GO:0030433,GO:0031224,GO:0031984,GO:0032991,GO:0033554,GO:0034645,GO:0034976,GO:0035966,GO:0036211,GO:0036503,GO:0042175,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043632,GO:0043686,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0047484,GO:0048583,GO:0050789,GO:0050896,GO:0051603,GO:0051716,GO:0065007,GO:0070085,GO:0071704,GO:0071944,GO:0080134,GO:0098796,GO:0098827,GO:1901135,GO:1901136,GO:1901137,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1902494,GO:1990234 |
| Evalue | 2.05e-265 |
| EggNOG OGs | COG1287@1|root,KOG2292@2759|Eukaryota |
| EC | 2.4.99.18 |
| Description | oligosaccharyl transferase activity |
| COG category | F |
| CAZy | GT66 |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01003,ko03019,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil8955.t1 ID=Gchil8955.t1|Name=Gchil8955.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=781bp MALSPAADPVQLRAEAASSDVHESLKTSKQKEAFLRTLTLALICLVSFSI RLFSILRYESIIHEFDPWFNFRSTRVLVEEGTYKFWNWFDSRSWYPLGRI VGGTVYPGIMYTAAFMYNILHILGFQVNIRDVCVLTAPTFSALTALSAYA LTKEAADTAAGIVAAAIVSIVPGYISRSVAGSYDNEGVAITAMIFCFYLW TKSVNTGSLFWSGLATLSYLYMVACWGGYIFLINLIPVYVLVMLFTGRYS HRLYVAYNTFYVLGTLLSMQIRFVGFNAVQTYEHLGAFGTFGLINLYCVA GWVRSFTGPRVFKAFVRWLALFTLSLLAFFLVISLVLDSSGRMTGRIRTF LDPTYASKHIPIIASVSEHQPTAWGSYFFDLHLTVYLMPIGLYFCFKRLS DANMFLVTYGAFAVYFSGIMVRIMLVLAPAASMLSAIGISETLKCCFRSL QTADEEDQLNIGVEDEARSTPRRSGREANEKDHGRSGDIAKKSKKTLRVK KSKSSKTEVVREETKPEIEKKRVLSLQASRPKVIPRPVALFVIAGSFFLL YQYVKHAIWATSEAYSSPSIVLSGRSSNGDRVFFDDYREAYYWLRQNTPE DAKVMSWWDYGYQISGMANRTVIVDNNTWNNTHIATVGKAMNSPEEVSYK IVRKLDVDYVLVVFGGVIEYSGDDINKFLWMVRIGGSVDKTVQEKDYLSS YGGYTVDANAGPALRKSLMFHLCYYRFADSGDRTSFDRVRRTRVPDAASI KLKYFEEAFTSEHWMVRIYRVKKPDARGWV* back to topspliced messenger RNA >Gchil8955.t1 ID=Gchil8955.t1|Name=Gchil8955.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2343bp|location=Sequence derived from alignment at tig00004370_pilon:422184..424623- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGCTGTCCCCTGCTGCTGATCCCGTTCAATTGCGTGCAGAAGCGGC CAGTTCAGATGTGCATGAATCGCTAAAGACGTCCAAACAGAAGGAGGCTT TTCTCAGAACGCTTACACTCGCACTTATCTGTCTTGTTTCGTTTTCAATT CGACTTTTCTCTATTCTGCGATACGAAAGCATAATACATGAGTTTGATCC TTGGTTCAACTTTCGAAGCACCCGAGTTCTGGTGGAAGAAGGAACTTATA AGTTTTGGAACTGGTTTGATTCAAGATCATGGTATCCACTGGGCCGAATT GTCGGCGGTACTGTTTATCCTGGGATCATGTACACAGCAGCGTTTATGTA CAACATCCTCCATATCCTTGGCTTTCAGGTCAATATCAGAGACGTGTGCG TGCTAACAGCCCCTACTTTCTCAGCACTGACCGCGCTTTCGGCCTATGCG CTTACCAAGGAAGCTGCCGATACAGCAGCAGGAATTGTAGCAGCGGCGAT CGTCTCAATAGTTCCTGGATACATATCCCGTTCTGTCGCTGGTTCGTACG ATAATGAAGGCGTTGCTATCACCGCAATGATTTTCTGCTTCTACTTGTGG ACTAAGTCTGTCAATACTGGATCACTTTTCTGGTCTGGTTTAGCGACACT ATCCTATTTGTACATGGTTGCTTGCTGGGGTGGGTACATTTTCCTTATCA ACTTGATTCCAGTTTACGTCCTTGTTATGCTCTTCACTGGTCGTTACTCT CATCGATTATATGTCGCGTACAACACATTCTACGTTCTCGGGACGCTTCT TTCGATGCAAATTCGCTTTGTAGGCTTTAATGCTGTTCAAACGTACGAAC ACCTTGGTGCGTTTGGGACATTTGGACTCATCAACCTGTATTGCGTTGCG GGTTGGGTGCGGAGCTTCACGGGGCCGCGAGTATTCAAAGCGTTTGTTCG CTGGCTTGCACTTTTCACGCTATCCTTGTTGGCTTTCTTCCTGGTAATCT CTCTTGTGCTCGACAGCAGTGGTCGTATGACCGGTCGAATTCGTACATTC TTGGATCCGACATATGCATCAAAGCACATTCCTATCATTGCATCTGTATC AGAGCATCAGCCAACGGCATGGGGTTCTTACTTTTTTGATCTTCACCTTA CAGTTTATCTGATGCCGATTGGGTTATACTTTTGCTTCAAGAGGCTATCT GACGCGAATATGTTTTTGGTGACCTATGGAGCTTTTGCCGTGTATTTTTC TGGGATTATGGTTAGAATTATGCTTGTCCTAGCCCCAGCGGCATCCATGT TGAGTGCTATAGGAATATCTGAAACTCTCAAGTGTTGCTTTAGGTCGCTA CAAACCGCAGACGAAGAAGACCAATTGAACATTGGTGTGGAAGACGAGGC CCGCTCCACTCCCAGAAGGAGTGGGCGGGAAGCAAATGAGAAAGATCATG GGCGCAGCGGAGATATAGCGAAGAAGTCTAAGAAAACGTTGCGGGTGAAA AAGTCCAAATCCAGTAAGACTGAGGTAGTACGGGAAGAAACGAAGCCCGA AATTGAAAAAAAGCGTGTGCTATCTTTGCAAGCCTCGCGACCAAAAGTGA TTCCGAGACCGGTGGCGCTGTTCGTGATCGCTGGGTCCTTCTTTCTTTTG TACCAATACGTAAAACACGCGATATGGGCAACCTCGGAAGCATACAGCAG TCCGTCCATTGTGTTGAGTGGTCGGAGCAGTAATGGCGATAGAGTGTTCT TTGATGACTACCGTGAGGCGTACTACTGGCTGCGGCAGAACACGCCCGAA GATGCCAAGGTGATGTCTTGGTGGGATTATGGATACCAGATTTCGGGGAT GGCGAATCGAACCGTTATTGTGGACAACAATACGTGGAATAACACGCACA TCGCGACTGTCGGGAAAGCAATGAACTCTCCGGAAGAAGTGTCGTATAAG ATTGTACGGAAATTGGATGTGGACTACGTACTTGTGGTGTTTGGGGGGGT GATCGAATACAGCGGGGATGATATCAACAAATTCTTGTGGATGGTAAGGA TTGGTGGATCCGTTGACAAGACGGTTCAAGAGAAAGACTACCTTTCCTCT TATGGAGGGTATACTGTTGATGCCAACGCCGGGCCTGCTCTGCGCAAGTC GCTGATGTTCCATCTTTGCTACTACCGCTTCGCAGATTCTGGCGACCGAA CGTCTTTTGATCGGGTGAGACGGACTCGAGTGCCTGATGCGGCTTCTATC AAGTTGAAGTACTTTGAGGAGGCGTTTACGAGCGAACATTGGATGGTTCG AATCTACCGAGTAAAGAAACCGGACGCAAGGGGATGGGTTTGA back to topprotein sequence of Gchil8955.t1 >Gchil8955.t1 ID=Gchil8955.t1|Name=Gchil8955.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=781bp
MALSPAADPVQLRAEAASSDVHESLKTSKQKEAFLRTLTLALICLVSFSI RLFSILRYESIIHEFDPWFNFRSTRVLVEEGTYKFWNWFDSRSWYPLGRI VGGTVYPGIMYTAAFMYNILHILGFQVNIRDVCVLTAPTFSALTALSAYA LTKEAADTAAGIVAAAIVSIVPGYISRSVAGSYDNEGVAITAMIFCFYLW TKSVNTGSLFWSGLATLSYLYMVACWGGYIFLINLIPVYVLVMLFTGRYS HRLYVAYNTFYVLGTLLSMQIRFVGFNAVQTYEHLGAFGTFGLINLYCVA GWVRSFTGPRVFKAFVRWLALFTLSLLAFFLVISLVLDSSGRMTGRIRTF LDPTYASKHIPIIASVSEHQPTAWGSYFFDLHLTVYLMPIGLYFCFKRLS DANMFLVTYGAFAVYFSGIMVRIMLVLAPAASMLSAIGISETLKCCFRSL QTADEEDQLNIGVEDEARSTPRRSGREANEKDHGRSGDIAKKSKKTLRVK KSKSSKTEVVREETKPEIEKKRVLSLQASRPKVIPRPVALFVIAGSFFLL YQYVKHAIWATSEAYSSPSIVLSGRSSNGDRVFFDDYREAYYWLRQNTPE DAKVMSWWDYGYQISGMANRTVIVDNNTWNNTHIATVGKAMNSPEEVSYK IVRKLDVDYVLVVFGGVIEYSGDDINKFLWMVRIGGSVDKTVQEKDYLSS YGGYTVDANAGPALRKSLMFHLCYYRFADSGDRTSFDRVRRTRVPDAASI KLKYFEEAFTSEHWMVRIYRVKKPDARGWV* back to topmRNA from alignment at tig00004370_pilon:422184..424623- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil8955.t1 ID=Gchil8955.t1|Name=Gchil8955.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2440bp|location=Sequence derived from alignment at tig00004370_pilon:422184..424623- (Gracilaria chilensis NLEC103_M9 male) ATGGCGCTGTCCCCTGCTGCTGATCCCGTTCAATTGCGTGCAGAAGCGGC
CAGTTCAGATGTGCATGAATCGCTAAAGACGTCCAAACAGAAGGAGGCTT
TTCTCAGAACGCTTACACTCGCACTTATCTGTCTTGTTTCGTTTTCAATT
CGACTTTTCTCTATTCTGCGATACGAAAGCATAATACATGAGTTTGATCC
TTGGTTCAACTTTCGAAGCACCCGGTAAGTACCTCGGTGATGCGTTTTAT
GGATAAAATGCAAACCTTACATAACTATGCGATTGCTAACTATTTGTCCT
TTGTTCGTGCTCATTGTACAGAGTTCTGGTGGAAGAAGGAACTTATAAGT
TTTGGAACTGGTTTGATTCAAGATCATGGTATCCACTGGGCCGAATTGTC
GGCGGTACTGTTTATCCTGGGATCATGTACACAGCAGCGTTTATGTACAA
CATCCTCCATATCCTTGGCTTTCAGGTCAATATCAGAGACGTGTGCGTGC
TAACAGCCCCTACTTTCTCAGCACTGACCGCGCTTTCGGCCTATGCGCTT
ACCAAGGAAGCTGCCGATACAGCAGCAGGAATTGTAGCAGCGGCGATCGT
CTCAATAGTTCCTGGATACATATCCCGTTCTGTCGCTGGTTCGTACGATA
ATGAAGGCGTTGCTATCACCGCAATGATTTTCTGCTTCTACTTGTGGACT
AAGTCTGTCAATACTGGATCACTTTTCTGGTCTGGTTTAGCGACACTATC
CTATTTGTACATGGTTGCTTGCTGGGGTGGGTACATTTTCCTTATCAACT
TGATTCCAGTTTACGTCCTTGTTATGCTCTTCACTGGTCGTTACTCTCAT
CGATTATATGTCGCGTACAACACATTCTACGTTCTCGGGACGCTTCTTTC
GATGCAAATTCGCTTTGTAGGCTTTAATGCTGTTCAAACGTACGAACACC
TTGGTGCGTTTGGGACATTTGGACTCATCAACCTGTATTGCGTTGCGGGT
TGGGTGCGGAGCTTCACGGGGCCGCGAGTATTCAAAGCGTTTGTTCGCTG
GCTTGCACTTTTCACGCTATCCTTGTTGGCTTTCTTCCTGGTAATCTCTC
TTGTGCTCGACAGCAGTGGTCGTATGACCGGTCGAATTCGTACATTCTTG
GATCCGACATATGCATCAAAGCACATTCCTATCATTGCATCTGTATCAGA
GCATCAGCCAACGGCATGGGGTTCTTACTTTTTTGATCTTCACCTTACAG
TTTATCTGATGCCGATTGGGTTATACTTTTGCTTCAAGAGGCTATCTGAC
GCGAATATGTTTTTGGTGACCTATGGAGCTTTTGCCGTGTATTTTTCTGG
GATTATGGTTAGAATTATGCTTGTCCTAGCCCCAGCGGCATCCATGTTGA
GTGCTATAGGAATATCTGAAACTCTCAAGTGTTGCTTTAGGTCGCTACAA
ACCGCAGACGAAGAAGACCAATTGAACATTGGTGTGGAAGACGAGGCCCG
CTCCACTCCCAGAAGGAGTGGGCGGGAAGCAAATGAGAAAGATCATGGGC
GCAGCGGAGATATAGCGAAGAAGTCTAAGAAAACGTTGCGGGTGAAAAAG
TCCAAATCCAGTAAGACTGAGGTAGTACGGGAAGAAACGAAGCCCGAAAT
TGAAAAAAAGCGTGTGCTATCTTTGCAAGCCTCGCGACCAAAAGTGATTC
CGAGACCGGTGGCGCTGTTCGTGATCGCTGGGTCCTTCTTTCTTTTGTAC
CAATACGTAAAACACGCGATATGGGCAACCTCGGAAGCATACAGCAGTCC
GTCCATTGTGTTGAGTGGTCGGAGCAGTAATGGCGATAGAGTGTTCTTTG
ATGACTACCGTGAGGCGTACTACTGGCTGCGGCAGAACACGCCCGAAGAT
GCCAAGGTGATGTCTTGGTGGGATTATGGATACCAGATTTCGGGGATGGC
GAATCGAACCGTTATTGTGGACAACAATACGTGGAATAACACGCACATCG
CGACTGTCGGGAAAGCAATGAACTCTCCGGAAGAAGTGTCGTATAAGATT
GTACGGAAATTGGATGTGGACTACGTACTTGTGGTGTTTGGGGGGGTGAT
CGAATACAGCGGGGATGATATCAACAAATTCTTGTGGATGGTAAGGATTG
GTGGATCCGTTGACAAGACGGTTCAAGAGAAAGACTACCTTTCCTCTTAT
GGAGGGTATACTGTTGATGCCAACGCCGGGCCTGCTCTGCGCAAGTCGCT
GATGTTCCATCTTTGCTACTACCGCTTCGCAGATTCTGGCGACCGAACGT
CTTTTGATCGGGTGAGACGGACTCGAGTGCCTGATGCGGCTTCTATCAAG
TTGAAGTACTTTGAGGAGGCGTTTACGAGCGAACATTGGATGGTTCGAAT
CTACCGAGTAAAGAAACCGGACGCAAGGGGATGGGTTTGA back to topCoding sequence (CDS) from alignment at tig00004370_pilon:422184..424623- >Gchil8955.t1 ID=Gchil8955.t1|Name=Gchil8955.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2343bp|location=Sequence derived from alignment at tig00004370_pilon:422184..424623- (Gracilaria chilensis NLEC103_M9 male) ATGGCGCTGTCCCCTGCTGCTGATCCCGTTCAATTGCGTGCAGAAGCGGC CAGTTCAGATGTGCATGAATCGCTAAAGACGTCCAAACAGAAGGAGGCTT TTCTCAGAACGCTTACACTCGCACTTATCTGTCTTGTTTCGTTTTCAATT CGACTTTTCTCTATTCTGCGATACGAAAGCATAATACATGAGTTTGATCC TTGGTTCAACTTTCGAAGCACCCGAGTTCTGGTGGAAGAAGGAACTTATA AGTTTTGGAACTGGTTTGATTCAAGATCATGGTATCCACTGGGCCGAATT GTCGGCGGTACTGTTTATCCTGGGATCATGTACACAGCAGCGTTTATGTA CAACATCCTCCATATCCTTGGCTTTCAGGTCAATATCAGAGACGTGTGCG TGCTAACAGCCCCTACTTTCTCAGCACTGACCGCGCTTTCGGCCTATGCG CTTACCAAGGAAGCTGCCGATACAGCAGCAGGAATTGTAGCAGCGGCGAT CGTCTCAATAGTTCCTGGATACATATCCCGTTCTGTCGCTGGTTCGTACG ATAATGAAGGCGTTGCTATCACCGCAATGATTTTCTGCTTCTACTTGTGG ACTAAGTCTGTCAATACTGGATCACTTTTCTGGTCTGGTTTAGCGACACT ATCCTATTTGTACATGGTTGCTTGCTGGGGTGGGTACATTTTCCTTATCA ACTTGATTCCAGTTTACGTCCTTGTTATGCTCTTCACTGGTCGTTACTCT CATCGATTATATGTCGCGTACAACACATTCTACGTTCTCGGGACGCTTCT TTCGATGCAAATTCGCTTTGTAGGCTTTAATGCTGTTCAAACGTACGAAC ACCTTGGTGCGTTTGGGACATTTGGACTCATCAACCTGTATTGCGTTGCG GGTTGGGTGCGGAGCTTCACGGGGCCGCGAGTATTCAAAGCGTTTGTTCG CTGGCTTGCACTTTTCACGCTATCCTTGTTGGCTTTCTTCCTGGTAATCT CTCTTGTGCTCGACAGCAGTGGTCGTATGACCGGTCGAATTCGTACATTC TTGGATCCGACATATGCATCAAAGCACATTCCTATCATTGCATCTGTATC AGAGCATCAGCCAACGGCATGGGGTTCTTACTTTTTTGATCTTCACCTTA CAGTTTATCTGATGCCGATTGGGTTATACTTTTGCTTCAAGAGGCTATCT GACGCGAATATGTTTTTGGTGACCTATGGAGCTTTTGCCGTGTATTTTTC TGGGATTATGGTTAGAATTATGCTTGTCCTAGCCCCAGCGGCATCCATGT TGAGTGCTATAGGAATATCTGAAACTCTCAAGTGTTGCTTTAGGTCGCTA CAAACCGCAGACGAAGAAGACCAATTGAACATTGGTGTGGAAGACGAGGC CCGCTCCACTCCCAGAAGGAGTGGGCGGGAAGCAAATGAGAAAGATCATG GGCGCAGCGGAGATATAGCGAAGAAGTCTAAGAAAACGTTGCGGGTGAAA AAGTCCAAATCCAGTAAGACTGAGGTAGTACGGGAAGAAACGAAGCCCGA AATTGAAAAAAAGCGTGTGCTATCTTTGCAAGCCTCGCGACCAAAAGTGA TTCCGAGACCGGTGGCGCTGTTCGTGATCGCTGGGTCCTTCTTTCTTTTG TACCAATACGTAAAACACGCGATATGGGCAACCTCGGAAGCATACAGCAG TCCGTCCATTGTGTTGAGTGGTCGGAGCAGTAATGGCGATAGAGTGTTCT TTGATGACTACCGTGAGGCGTACTACTGGCTGCGGCAGAACACGCCCGAA GATGCCAAGGTGATGTCTTGGTGGGATTATGGATACCAGATTTCGGGGAT GGCGAATCGAACCGTTATTGTGGACAACAATACGTGGAATAACACGCACA TCGCGACTGTCGGGAAAGCAATGAACTCTCCGGAAGAAGTGTCGTATAAG ATTGTACGGAAATTGGATGTGGACTACGTACTTGTGGTGTTTGGGGGGGT GATCGAATACAGCGGGGATGATATCAACAAATTCTTGTGGATGGTAAGGA TTGGTGGATCCGTTGACAAGACGGTTCAAGAGAAAGACTACCTTTCCTCT TATGGAGGGTATACTGTTGATGCCAACGCCGGGCCTGCTCTGCGCAAGTC GCTGATGTTCCATCTTTGCTACTACCGCTTCGCAGATTCTGGCGACCGAA CGTCTTTTGATCGGGTGAGACGGACTCGAGTGCCTGATGCGGCTTCTATC AAGTTGAAGTACTTTGAGGAGGCGTTTACGAGCGAACATTGGATGGTTCG AATCTACCGAGTAAAGAAACCGGACGCAAGGGGATGGGTTTGA back to top
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